RNA–Protein interactions for RNA: ENST00000596368.1

SAMD4B-206, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 5 BASIC

Gene SAMD4B, Length 1,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-206ENST00000596368 SYNE4Q8N205 404 aa14.48□□□□□ -0.09
SAMD4B-206ENST00000596368 XAGE3Q8WTP9 111 aa14.48□□□□□ -0.09
SAMD4B-206ENST00000596368 DDX21Q9NR30 783 aaKnown RBP eCLIP14.48□□□□□ -0.09
SAMD4B-206ENST00000596368 TAF1P21675 1872 aa14.48□□□□□ -0.09
SAMD4B-206ENST00000596368 LAMB2P55268 1798 aa14.47□□□□□ -0.09
SAMD4B-206ENST00000596368 KDM2BQ8NHM5 1336 aa14.47□□□□□ -0.09
SAMD4B-206ENST00000596368 GTF2E1P29083 439 aaPredicted RBP14.47□□□□□ -0.09
SAMD4B-206ENST00000596368 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
SAMD4B-206ENST00000596368 LTBP3Q9NS15 1303 aa14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 HTRA3P83110 453 aa14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 CRY2Q49AN0 593 aa14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 DIEXFQ68CQ4 756 aaKnown RBP14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 CHMP4AQ9BY43 222 aa14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 NYXQ9GZU5 481 aa14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 TAOK3Q9H2K8 898 aa14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 SNED1Q8TER0 1413 aa14.46□□□□□ -0.09
SAMD4B-206ENST00000596368 PCNTO95613 3336 aa14.46□□□□□ -0.1
SAMD4B-206ENST00000596368 TSR2Q969E8 191 aaKnown RBP14.45□□□□□ -0.1
SAMD4B-206ENST00000596368 SALL2Q9Y467 1007 aaPredicted RBP14.45□□□□□ -0.1
SAMD4B-206ENST00000596368 ZC3H4Q9UPT8 1303 aaKnown RBP14.44□□□□□ -0.1
SAMD4B-206ENST00000596368 WDR90Q96KV7 1748 aa14.44□□□□□ -0.1
SAMD4B-206ENST00000596368 C8orf58Q8NAV2 365 aa14.44□□□□□ -0.1
SAMD4B-206ENST00000596368 RBM46Q8TBY0 533 aaKnown RBP14.44□□□□□ -0.1
SAMD4B-206ENST00000596368 ZNF277Q9NRM2 450 aaPredicted RBP14.44□□□□□ -0.1
SAMD4B-206ENST00000596368 HYPKQ9NX55 129 aa14.44□□□□□ -0.1
SAMD4B-206ENST00000596368 COL4A5P29400 1685 aa14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 ELL2O00472 640 aaPredicted RBP14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 TCERG1O14776 1098 aaKnown RBP14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 DDNO94850 711 aaPredicted RBP14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 ALDH1B1P30837 517 aa14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 HOXA10P31260 410 aaPredicted RBP14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 CCDC93Q567U6 631 aa14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 NLRP10Q86W26 655 aa14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 IBTKQ9P2D0 1353 aaPredicted RBP14.43□□□□□ -0.1
SAMD4B-206ENST00000596368 HCLS1P14317 486 aaPredicted RBP14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 FKBP4Q02790 459 aaKnown RBP eCLIP14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 TCIRG1Q13488 830 aa14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 SLC10A5Q5PT55 438 aa14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 CCDC30Q5VVM6 783 aa14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 PPP1R42Q7Z4L9 355 aa14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 C16orf71Q8IYS4 520 aaPredicted RBP14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 DNAJC5GQ8N7S2 189 aa14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 TSPYL6Q8N831 410 aa14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 UTP14AQ9BVJ6 771 aaKnown RBP14.42□□□□□ -0.1
SAMD4B-206ENST00000596368 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 FANCIQ9NVI1 1328 aa14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 RIC1Q4ADV7 1423 aa14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 DDX60Q8IY21 1712 aaKnown RBP14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 POTEJP0CG39 1038 aa14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 VEGFAP15692 232 aaPredicted RBP14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 PARP10Q53GL7 1025 aa14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 HSP90AB3PQ58FF7 597 aa14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 SOGA3Q5TF21 947 aa14.41□□□□□ -0.1
SAMD4B-206ENST00000596368 COL4A1P02462 1669 aa14.4□□□□□ -0.1
SAMD4B-206ENST00000596368 ATP5J2-PTCD1G3V325 749 aa14.4□□□□□ -0.1
SAMD4B-206ENST00000596368 TWISTNBQ3B726 338 aaPredicted RBP14.4□□□□□ -0.1
SAMD4B-206ENST00000596368 RPGRQ92834 1020 aaKnown RBP14.4□□□□□ -0.1
SAMD4B-206ENST00000596368 MYH16Q9H6N6 1097 aa14.4□□□□□ -0.1
SAMD4B-206ENST00000596368 PHAXQ9H814 394 aaKnown RBP14.4□□□□□ -0.1
SAMD4B-206ENST00000596368 ZNF541Q9H0D2 1346 aa14.4□□□□□ -0.1
SAMD4B-206ENST00000596368 APLP1P51693 650 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 DPY19L2Q6NUT2 758 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 ANKRD13DQ6ZTN6 518 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 MIER1Q8N108 512 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 PLBD2Q8NHP8 589 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 NLRP3Q96P20 1036 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 CRAMP1Q96RY5 1269 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
SAMD4B-206ENST00000596368 IARSP41252 1262 aaKnown RBP14.38□□□□□ -0.11
SAMD4B-206ENST00000596368 FSTL1Q12841 308 aa14.38□□□□□ -0.11
SAMD4B-206ENST00000596368 RTKN2Q8IZC4 609 aa14.38□□□□□ -0.11
SAMD4B-206ENST00000596368 RBM17Q96I25 401 aaKnown RBP14.38□□□□□ -0.11
SAMD4B-206ENST00000596368 TRMT112Q9UI30 125 aaKnown RBP14.38□□□□□ -0.11
SAMD4B-206ENST00000596368 ABCC4O15439 1325 aa14.38□□□□□ -0.11
SAMD4B-206ENST00000596368 PPEF1O14829 653 aaPredicted RBP14.37□□□□□ -0.11
SAMD4B-206ENST00000596368 RTL5Q5HYW3 569 aaPredicted RBP14.37□□□□□ -0.11
SAMD4B-206ENST00000596368 FAM89AQ96GI7 184 aa14.37□□□□□ -0.11
SAMD4B-206ENST00000596368 STK31Q9BXU1 1019 aa14.37□□□□□ -0.11
SAMD4B-206ENST00000596368 RNF123Q5XPI4 1314 aa14.37□□□□□ -0.11
SAMD4B-206ENST00000596368 VAMP4O75379 141 aa14.36□□□□□ -0.11
SAMD4B-206ENST00000596368 SMC1BQ8NDV3 1235 aa14.36□□□□□ -0.11
SAMD4B-206ENST00000596368 PSMD1Q99460 953 aa14.36□□□□□ -0.11
SAMD4B-206ENST00000596368 SCN4AP35499 1836 aa14.36□□□□□ -0.11
SAMD4B-206ENST00000596368 FZD9O00144 591 aa14.35□□□□□ -0.11
SAMD4B-206ENST00000596368 EXOSC9Q06265 439 aaKnown RBP14.35□□□□□ -0.11
SAMD4B-206ENST00000596368 JARID2Q92833 1246 aaPredicted RBP14.35□□□□□ -0.11
SAMD4B-206ENST00000596368 SH3TC1Q8TE82 1336 aa14.35□□□□□ -0.11
SAMD4B-206ENST00000596368 LTBP1Q14766 1721 aa14.35□□□□□ -0.11
SAMD4B-206ENST00000596368 E9PSI1 815 aa14.34□□□□□ -0.11
SAMD4B-206ENST00000596368 DDX58O95786 925 aaKnown RBP14.34□□□□□ -0.11
SAMD4B-206ENST00000596368 TRIM28Q13263 835 aaKnown RBP14.34□□□□□ -0.11
SAMD4B-206ENST00000596368 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
SAMD4B-206ENST00000596368 ATP6V0A2Q9Y487 856 aa14.34□□□□□ -0.11
SAMD4B-206ENST00000596368 SLC4A2P04920 1241 aa14.33□□□□□ -0.12
SAMD4B-206ENST00000596368 CC2D2BQ6DHV5 1058 aa14.33□□□□□ -0.12
SAMD4B-206ENST00000596368 G2E3Q7L622 706 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms