RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 ALDH1B1P30837 517 aa20.77■□□□□ 0.92
IRF3-210ENST00000595240 HOXA10P31260 410 aaPredicted RBP20.77■□□□□ 0.92
IRF3-210ENST00000595240 NLRP10Q86W26 655 aa20.77■□□□□ 0.92
IRF3-210ENST00000595240 C8orf58Q8NAV2 365 aa20.77■□□□□ 0.92
IRF3-210ENST00000595240 PLBD2Q8NHP8 589 aa20.77■□□□□ 0.92
IRF3-210ENST00000595240 RNF123Q5XPI4 1314 aa20.77■□□□□ 0.91
IRF3-210ENST00000595240 ELL2O00472 640 aaPredicted RBP20.76■□□□□ 0.91
IRF3-210ENST00000595240 CCDC93Q567U6 631 aa20.76■□□□□ 0.91
IRF3-210ENST00000595240 SLC10A5Q5PT55 438 aa20.76■□□□□ 0.91
IRF3-210ENST00000595240 FER1L6Q2WGJ9 1857 aa20.75■□□□□ 0.91
IRF3-210ENST00000595240 ANKRD13DQ6ZTN6 518 aa20.75■□□□□ 0.91
IRF3-210ENST00000595240 C3orf67Q6ZVT6 689 aa20.75■□□□□ 0.91
IRF3-210ENST00000595240 RPGRQ92834 1020 aaKnown RBP20.74■□□□□ 0.91
IRF3-210ENST00000595240 TSR2Q969E8 191 aaKnown RBP20.74■□□□□ 0.91
IRF3-210ENST00000595240 IL16Q14005 1332 aa20.74■□□□□ 0.91
IRF3-210ENST00000595240 GLTPD2A6NH11 291 aa20.73■□□□□ 0.91
IRF3-210ENST00000595240 OLFM4Q6UX06 510 aa20.73■□□□□ 0.91
IRF3-210ENST00000595240 TOMM70O94826 608 aa20.72■□□□□ 0.91
IRF3-210ENST00000595240 RTKN2Q8IZC4 609 aa20.72■□□□□ 0.91
IRF3-210ENST00000595240 TSPYL6Q8N831 410 aa20.72■□□□□ 0.91
IRF3-210ENST00000595240 NLRP3Q96P20 1036 aa20.72■□□□□ 0.91
IRF3-210ENST00000595240 CRAMP1Q96RY5 1269 aa20.72■□□□□ 0.91
IRF3-210ENST00000595240 ISCA1Q9BUE6 129 aa20.72■□□□□ 0.91
IRF3-210ENST00000595240 CHMP4AQ9BY43 222 aa20.72■□□□□ 0.91
IRF3-210ENST00000595240 SNED1Q8TER0 1413 aa20.71■□□□□ 0.91
IRF3-210ENST00000595240 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
IRF3-210ENST00000595240 FKBP4Q02790 459 aaKnown RBP eCLIP20.71■□□□□ 0.91
IRF3-210ENST00000595240 RBM17Q96I25 401 aaKnown RBP20.71■□□□□ 0.91
IRF3-210ENST00000595240 TRMT112Q9UI30 125 aaKnown RBP20.71■□□□□ 0.91
IRF3-210ENST00000595240 ANKRD36CQ5JPF3 1778 aa20.71■□□□□ 0.91
IRF3-210ENST00000595240 SH3TC1Q8TE82 1336 aa20.71■□□□□ 0.91
IRF3-210ENST00000595240 CCDC30Q5VVM6 783 aa20.7■□□□□ 0.9
IRF3-210ENST00000595240 SYNE4Q8N205 404 aa20.7■□□□□ 0.9
IRF3-210ENST00000595240 PHAXQ9H814 394 aaKnown RBP20.7■□□□□ 0.9
IRF3-210ENST00000595240 RRAGCQ9HB90 399 aa20.7■□□□□ 0.9
IRF3-210ENST00000595240 TIAM2Q8IVF5 1701 aa20.7■□□□□ 0.9
IRF3-210ENST00000595240 HCLS1P14317 486 aaPredicted RBP20.69■□□□□ 0.9
IRF3-210ENST00000595240 GOLGA2Q08379 1002 aa20.69■□□□□ 0.9
IRF3-210ENST00000595240 TRIM28Q13263 835 aaKnown RBP20.69■□□□□ 0.9
IRF3-210ENST00000595240 CC2D2BQ6DHV5 1058 aa20.69■□□□□ 0.9
IRF3-210ENST00000595240 ATP5J2-PTCD1G3V325 749 aa20.68■□□□□ 0.9
IRF3-210ENST00000595240 WDR63Q8IWG1 891 aa20.68■□□□□ 0.9
IRF3-210ENST00000595240 ZNF277Q9NRM2 450 aaPredicted RBP20.68■□□□□ 0.9
IRF3-210ENST00000595240 HSPA6P17066 643 aa20.67■□□□□ 0.9
IRF3-210ENST00000595240 RIC3Q7Z5B4 369 aa20.67■□□□□ 0.9
IRF3-210ENST00000595240 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
IRF3-210ENST00000595240 RBM46Q8TBY0 533 aaKnown RBP20.67■□□□□ 0.9
IRF3-210ENST00000595240 PSMD1Q99460 953 aa20.67■□□□□ 0.9
IRF3-210ENST00000595240 PPEF1O14829 653 aaPredicted RBP20.66■□□□□ 0.9
IRF3-210ENST00000595240 TWISTNBQ3B726 338 aaPredicted RBP20.66■□□□□ 0.9
IRF3-210ENST00000595240 GRIPAP1Q4V328 841 aa20.66■□□□□ 0.9
IRF3-210ENST00000595240 DPY19L2Q6NUT2 758 aa20.66■□□□□ 0.9
IRF3-210ENST00000595240 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
IRF3-210ENST00000595240 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
IRF3-210ENST00000595240 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
IRF3-210ENST00000595240 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
IRF3-210ENST00000595240 CCDC88AQ3V6T2 1871 aa20.66■□□□□ 0.9
IRF3-210ENST00000595240 ABCC4O15439 1325 aa20.65■□□□□ 0.9
IRF3-210ENST00000595240 VEGFAP15692 232 aaPredicted RBP20.65■□□□□ 0.9
IRF3-210ENST00000595240 SLC51AQ86UW1 340 aa20.65■□□□□ 0.9
IRF3-210ENST00000595240 FAM89AQ96GI7 184 aa20.65■□□□□ 0.9
IRF3-210ENST00000595240 DICER1Q9UPY3 1922 aaKnown RBP20.65■□□□□ 0.9
IRF3-210ENST00000595240 IARSP41252 1262 aaKnown RBP20.64■□□□□ 0.89
IRF3-210ENST00000595240 POTECB2RU33 542 aa20.63■□□□□ 0.89
IRF3-210ENST00000595240 DDX58O95786 925 aaKnown RBP20.63■□□□□ 0.89
IRF3-210ENST00000595240 STK31Q9BXU1 1019 aa20.63■□□□□ 0.89
IRF3-210ENST00000595240 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
IRF3-210ENST00000595240 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
IRF3-210ENST00000595240 BBOX1O75936 387 aa20.62■□□□□ 0.89
IRF3-210ENST00000595240 MYD88Q99836 296 aa20.62■□□□□ 0.89
IRF3-210ENST00000595240 METTL22Q9BUU2 404 aaPredicted RBP20.62■□□□□ 0.89
IRF3-210ENST00000595240 WDR90Q96KV7 1748 aa20.61■□□□□ 0.89
IRF3-210ENST00000595240 CEP350Q5VT06 3117 aa20.61■□□□□ 0.89
IRF3-210ENST00000595240 DDNO94850 711 aaPredicted RBP20.61■□□□□ 0.89
IRF3-210ENST00000595240 FSTL1Q12841 308 aa20.61■□□□□ 0.89
IRF3-210ENST00000595240 SF3B3Q15393 1217 aaKnown RBP20.61■□□□□ 0.89
IRF3-210ENST00000595240 DDX46Q7L014 1031 aaKnown RBP20.61■□□□□ 0.89
IRF3-210ENST00000595240 ZBTB38Q8NAP3 1195 aaPredicted RBP20.61■□□□□ 0.89
IRF3-210ENST00000595240 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
IRF3-210ENST00000595240 GRAPQ13588 217 aa20.6■□□□□ 0.89
IRF3-210ENST00000595240 RTL5Q5HYW3 569 aaPredicted RBP20.6■□□□□ 0.89
IRF3-210ENST00000595240 KSR2Q6VAB6 950 aa20.6■□□□□ 0.89
IRF3-210ENST00000595240 GRAPLQ8TC17 118 aaPredicted RBP20.6■□□□□ 0.89
IRF3-210ENST00000595240 SPINK5Q9NQ38 1064 aaPredicted RBP20.6■□□□□ 0.89
IRF3-210ENST00000595240 MAP3K2Q9Y2U5 619 aa20.6■□□□□ 0.89
IRF3-210ENST00000595240 LAMB2P55268 1798 aa20.59■□□□□ 0.89
IRF3-210ENST00000595240 ZNF541Q9H0D2 1346 aa20.59■□□□□ 0.89
IRF3-210ENST00000595240 PI4KAP2A4QPH2 592 aa20.59■□□□□ 0.89
IRF3-210ENST00000595240 FZD9O00144 591 aa20.59■□□□□ 0.89
IRF3-210ENST00000595240 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
IRF3-210ENST00000595240 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
IRF3-210ENST00000595240 SP8Q8IXZ3 490 aa20.59■□□□□ 0.89
IRF3-210ENST00000595240 PI4KAP1Q8N8J0 262 aa20.59■□□□□ 0.89
IRF3-210ENST00000595240 TMX4Q9H1E5 349 aaPredicted RBP20.59■□□□□ 0.89
IRF3-210ENST00000595240 VAMP4O75379 141 aa20.58■□□□□ 0.89
IRF3-210ENST00000595240 G2E3Q7L622 706 aa20.58■□□□□ 0.89
IRF3-210ENST00000595240 SMC1BQ8NDV3 1235 aa20.58■□□□□ 0.89
IRF3-210ENST00000595240 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.89
IRF3-210ENST00000595240 CWC25Q9NXE8 425 aaPredicted RBP20.58■□□□□ 0.89
IRF3-210ENST00000595240 DDX60Q8IY21 1712 aaKnown RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms