RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 ABCC12Q96J65 1359 aa24.67■■□□□ 1.54
LTBP4-208ENST00000593738 NFKBIEO00221 500 aa24.66■■□□□ 1.54
LTBP4-208ENST00000593738 SLC10A5Q5PT55 438 aa24.66■■□□□ 1.54
LTBP4-208ENST00000593738 CCDC30Q5VVM6 783 aa24.66■■□□□ 1.54
LTBP4-208ENST00000593738 WDR63Q8IWG1 891 aa24.66■■□□□ 1.54
LTBP4-208ENST00000593738 FAM9BQ8IZU0 186 aa24.66■■□□□ 1.54
LTBP4-208ENST00000593738 ZNF219Q9P2Y4 722 aaPredicted RBP24.66■■□□□ 1.54
LTBP4-208ENST00000593738 TNRC6CQ9HCJ0 1690 aaKnown RBP24.66■■□□□ 1.54
LTBP4-208ENST00000593738 LTBP3Q9NS15 1303 aa24.65■■□□□ 1.54
LTBP4-208ENST00000593738 NLRP10Q86W26 655 aa24.65■■□□□ 1.54
LTBP4-208ENST00000593738 C7orf43Q8WVR3 580 aa24.65■■□□□ 1.54
LTBP4-208ENST00000593738 TSR2Q969E8 191 aaKnown RBP24.64■■□□□ 1.54
LTBP4-208ENST00000593738 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
LTBP4-208ENST00000593738 HOXA10P31260 410 aaPredicted RBP24.63■■□□□ 1.53
LTBP4-208ENST00000593738 RPGRQ92834 1020 aaKnown RBP24.63■■□□□ 1.53
LTBP4-208ENST00000593738 NLRP3Q96P20 1036 aa24.63■■□□□ 1.53
LTBP4-208ENST00000593738 KDM2BQ8NHM5 1336 aa24.62■■□□□ 1.53
LTBP4-208ENST00000593738 PRELPP51888 382 aa24.62■■□□□ 1.53
LTBP4-208ENST00000593738 CCDC93Q567U6 631 aa24.62■■□□□ 1.53
LTBP4-208ENST00000593738 TAOK3Q9H2K8 898 aa24.62■■□□□ 1.53
LTBP4-208ENST00000593738 DICER1Q9UPY3 1922 aaKnown RBP24.62■■□□□ 1.53
LTBP4-208ENST00000593738 GOLGA2Q08379 1002 aa24.61■■□□□ 1.53
LTBP4-208ENST00000593738 TSPYL6Q8N831 410 aa24.61■■□□□ 1.53
LTBP4-208ENST00000593738 RBM17Q96I25 401 aaKnown RBP24.61■■□□□ 1.53
LTBP4-208ENST00000593738 CRAMP1Q96RY5 1269 aa24.61■■□□□ 1.53
LTBP4-208ENST00000593738 ISCA1Q9BUE6 129 aa24.61■■□□□ 1.53
LTBP4-208ENST00000593738 TRMT112Q9UI30 125 aaKnown RBP24.61■■□□□ 1.53
LTBP4-208ENST00000593738 TRIM28Q13263 835 aaKnown RBP24.6■■□□□ 1.53
LTBP4-208ENST00000593738 RIC3Q7Z5B4 369 aa24.6■■□□□ 1.53
LTBP4-208ENST00000593738 RTKN2Q8IZC4 609 aa24.6■■□□□ 1.53
LTBP4-208ENST00000593738 KIF3CO14782 793 aa24.59■■□□□ 1.53
LTBP4-208ENST00000593738 CC2D2BQ6DHV5 1058 aa24.59■■□□□ 1.53
LTBP4-208ENST00000593738 PHAXQ9H814 394 aaKnown RBP24.59■■□□□ 1.53
LTBP4-208ENST00000593738 SALL2Q9Y467 1007 aaPredicted RBP24.59■■□□□ 1.53
LTBP4-208ENST00000593738 SH3TC1Q8TE82 1336 aa24.59■■□□□ 1.53
LTBP4-208ENST00000593738 DDX58O95786 925 aaKnown RBP24.58■■□□□ 1.53
LTBP4-208ENST00000593738 TWISTNBQ3B726 338 aaPredicted RBP24.58■■□□□ 1.53
LTBP4-208ENST00000593738 STK31Q9BXU1 1019 aa24.58■■□□□ 1.53
LTBP4-208ENST00000593738 TIAM2Q8IVF5 1701 aa24.58■■□□□ 1.52
LTBP4-208ENST00000593738 GRIPAP1Q4V328 841 aa24.57■■□□□ 1.52
LTBP4-208ENST00000593738 FKBP4Q02790 459 aaKnown RBP eCLIP24.56■■□□□ 1.52
LTBP4-208ENST00000593738 FANCIQ9NVI1 1328 aa24.56■■□□□ 1.52
LTBP4-208ENST00000593738 GLTPD2A6NH11 291 aa24.55■■□□□ 1.52
LTBP4-208ENST00000593738 ATP5J2-PTCD1G3V325 749 aa24.55■■□□□ 1.52
LTBP4-208ENST00000593738 C3orf67Q6ZVT6 689 aa24.55■■□□□ 1.52
LTBP4-208ENST00000593738 NMRK2Q9NPI5 230 aa24.55■■□□□ 1.52
LTBP4-208ENST00000593738 LAMB2P55268 1798 aa24.54■■□□□ 1.52
LTBP4-208ENST00000593738 DPY19L2Q6NUT2 758 aa24.54■■□□□ 1.52
LTBP4-208ENST00000593738 CACNA1FO60840 1977 aa24.54■■□□□ 1.52
LTBP4-208ENST00000593738 HCLS1P14317 486 aaPredicted RBP24.53■■□□□ 1.52
LTBP4-208ENST00000593738 SYNE4Q8N205 404 aa24.53■■□□□ 1.52
LTBP4-208ENST00000593738 TOMM70O94826 608 aa24.52■■□□□ 1.52
LTBP4-208ENST00000593738 PSMD1Q99460 953 aa24.52■■□□□ 1.52
LTBP4-208ENST00000593738 MYH16Q9H6N6 1097 aa24.52■■□□□ 1.52
LTBP4-208ENST00000593738 PPEF1O14829 653 aaPredicted RBP24.51■■□□□ 1.51
LTBP4-208ENST00000593738 HSP90B1P14625 803 aaKnown RBP24.51■■□□□ 1.51
LTBP4-208ENST00000593738 OLFM4Q6UX06 510 aa24.51■■□□□ 1.51
LTBP4-208ENST00000593738 CCDC191Q8NCU4 936 aa24.51■■□□□ 1.51
LTBP4-208ENST00000593738 METTL22Q9BUU2 404 aaPredicted RBP24.51■■□□□ 1.51
LTBP4-208ENST00000593738 TMX4Q9H1E5 349 aaPredicted RBP24.51■■□□□ 1.51
LTBP4-208ENST00000593738 DDX60Q8IY21 1712 aaKnown RBP24.5■■□□□ 1.51
LTBP4-208ENST00000593738 BBOX1O75936 387 aa24.5■■□□□ 1.51
LTBP4-208ENST00000593738 KSR2Q6VAB6 950 aa24.5■■□□□ 1.51
LTBP4-208ENST00000593738 C16orf71Q8IYS4 520 aaPredicted RBP24.5■■□□□ 1.51
LTBP4-208ENST00000593738 FAM89AQ96GI7 184 aa24.5■■□□□ 1.51
LTBP4-208ENST00000593738 MYD88Q99836 296 aa24.5■■□□□ 1.51
LTBP4-208ENST00000593738 RRAGCQ9HB90 399 aa24.5■■□□□ 1.51
LTBP4-208ENST00000593738 CCER2I3L3R5 266 aa24.49■■□□□ 1.51
LTBP4-208ENST00000593738 VAMP4O75379 141 aa24.49■■□□□ 1.51
LTBP4-208ENST00000593738 SLC4A2P04920 1241 aa24.49■■□□□ 1.51
LTBP4-208ENST00000593738 EXOSC9Q06265 439 aaKnown RBP24.49■■□□□ 1.51
LTBP4-208ENST00000593738 DDX46Q7L014 1031 aaKnown RBP24.49■■□□□ 1.51
LTBP4-208ENST00000593738 ZBTB38Q8NAP3 1195 aaPredicted RBP24.49■■□□□ 1.51
LTBP4-208ENST00000593738 SNED1Q8TER0 1413 aa24.49■■□□□ 1.51
LTBP4-208ENST00000593738 ABCC4O15439 1325 aa24.48■■□□□ 1.51
LTBP4-208ENST00000593738 ZNF277Q9NRM2 450 aaPredicted RBP24.48■■□□□ 1.51
LTBP4-208ENST00000593738 MAP3K2Q9Y2U5 619 aa24.48■■□□□ 1.51
LTBP4-208ENST00000593738 ATP6V0A2Q9Y487 856 aa24.48■■□□□ 1.51
LTBP4-208ENST00000593738 PI4KAP2A4QPH2 592 aa24.47■■□□□ 1.51
LTBP4-208ENST00000593738 VEGFAP15692 232 aaPredicted RBP24.47■■□□□ 1.51
LTBP4-208ENST00000593738 IARSP41252 1262 aaKnown RBP24.47■■□□□ 1.51
LTBP4-208ENST00000593738 SF3B3Q15393 1217 aaKnown RBP24.47■■□□□ 1.51
LTBP4-208ENST00000593738 PI4KAP1Q8N8J0 262 aa24.47■■□□□ 1.51
LTBP4-208ENST00000593738 SPINK5Q9NQ38 1064 aaPredicted RBP24.47■■□□□ 1.51
LTBP4-208ENST00000593738 CWC25Q9NXE8 425 aaPredicted RBP24.47■■□□□ 1.51
LTBP4-208ENST00000593738 ZNF521Q96K83 1311 aa24.46■■□□□ 1.51
LTBP4-208ENST00000593738 IRS4O14654 1257 aaPredicted RBP24.46■■□□□ 1.51
LTBP4-208ENST00000593738 TCERG1O14776 1098 aaKnown RBP24.46■■□□□ 1.51
LTBP4-208ENST00000593738 TMC4Q7Z404 712 aa24.46■■□□□ 1.51
LTBP4-208ENST00000593738 RBM46Q8TBY0 533 aaKnown RBP24.46■■□□□ 1.51
LTBP4-208ENST00000593738 WDR90Q96KV7 1748 aa24.46■■□□□ 1.51
LTBP4-208ENST00000593738 PCCAP05165 728 aaPredicted RBP24.45■■□□□ 1.5
LTBP4-208ENST00000593738 NEXNQ0ZGT2 675 aa24.45■■□□□ 1.5
LTBP4-208ENST00000593738 GRAPQ13588 217 aa24.45■■□□□ 1.5
LTBP4-208ENST00000593738 SP8Q8IXZ3 490 aa24.45■■□□□ 1.5
LTBP4-208ENST00000593738 GRAPLQ8TC17 118 aaPredicted RBP24.45■■□□□ 1.5
LTBP4-208ENST00000593738 ZNF428Q96B54 188 aa24.45■■□□□ 1.5
LTBP4-208ENST00000593738 G2E3Q7L622 706 aa24.44■■□□□ 1.5
LTBP4-208ENST00000593738 FLIIQ13045 1269 aa24.43■■□□□ 1.5
LTBP4-208ENST00000593738 RTL5Q5HYW3 569 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms