RNA–Protein interactions for RNA: ENST00000593062.5

EIF3K-212, Transcript of eukaryotic translation initiation factor 3 subunit K, human

TSL 2

Gene EIF3K, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3K-212	ENST00000593062	XAGE3	Q8WTP9	111 aa		12.52	□□□□□ -0.41
EIF3K-212	ENST00000593062	RBM17	Q96I25	401 aa	Known RBP	12.52	□□□□□ -0.41
EIF3K-212	ENST00000593062	UTP14A	Q9BVJ6	771 aa	Known RBP	12.52	□□□□□ -0.41
EIF3K-212	ENST00000593062	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.52	□□□□□ -0.41
EIF3K-212	ENST00000593062	KDM3B	Q7LBC6	1761 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	NUP98	P52948	1817 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	DICER1	Q9UPY3	1922 aa	Known RBP	12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	NTSR2	O95665	410 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	LRP10	Q7Z4F1	713 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	JMY	Q8N9B5	988 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	JDP2	Q8WYK2	163 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	RUNDC1	Q96C34	613 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	NLRP3	Q96P20	1036 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	TRIM35	Q9UPQ4	493 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	GJA3	Q9Y6H8	435 aa		12.51	□□□□□ -0.41
EIF3K-212	ENST00000593062	IQCA1L	A6NCM1	817 aa		12.5	□□□□□ -0.41
EIF3K-212	ENST00000593062	CHL1	O00533	1208 aa		12.5	□□□□□ -0.41
EIF3K-212	ENST00000593062	HCLS1	P14317	486 aa	Predicted RBP	12.5	□□□□□ -0.41
EIF3K-212	ENST00000593062	HOXA10	P31260	410 aa	Predicted RBP	12.5	□□□□□ -0.41
EIF3K-212	ENST00000593062	MKRN1	Q9UHC7	482 aa	Known RBP	12.5	□□□□□ -0.41
EIF3K-212	ENST00000593062	ERBB4	Q15303	1308 aa		12.5	□□□□□ -0.41
EIF3K-212	ENST00000593062	RNF123	Q5XPI4	1314 aa		12.49	□□□□□ -0.41
EIF3K-212	ENST00000593062	PPEF1	O14829	653 aa	Predicted RBP	12.49	□□□□□ -0.41
EIF3K-212	ENST00000593062	PARP10	Q53GL7	1025 aa		12.49	□□□□□ -0.41
EIF3K-212	ENST00000593062	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.49	□□□□□ -0.41
EIF3K-212	ENST00000593062	LARGE2	Q8N3Y3	721 aa		12.49	□□□□□ -0.41
EIF3K-212	ENST00000593062	CRAMP1	Q96RY5	1269 aa		12.49	□□□□□ -0.41
EIF3K-212	ENST00000593062	BABAM1	Q9NWV8	329 aa		12.49	□□□□□ -0.41
EIF3K-212	ENST00000593062	HACL1	Q9UJ83	578 aa		12.49	□□□□□ -0.41
EIF3K-212	ENST00000593062	LAMB4	A4D0S4	1761 aa		12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	FZD9	O00144	591 aa		12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	EPHX2	P34913	555 aa		12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	EIF6	P56537	245 aa	Known RBP	12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	CC2D2B	Q6DHV5	1058 aa		12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	PSMD1	Q99460	953 aa		12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	TMX4	Q9H1E5	349 aa	Predicted RBP	12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	CHPF2	Q9P2E5	772 aa		12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	TRMT112	Q9UI30	125 aa	Known RBP	12.48	□□□□□ -0.41
EIF3K-212	ENST00000593062	ELL2	O00472	640 aa	Predicted RBP	12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	TCIRG1	Q13488	830 aa		12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	RTL5	Q5HYW3	569 aa	Predicted RBP	12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	SLC10A5	Q5PT55	438 aa		12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	HDGFL1	Q5TGJ6	251 aa		12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	MAP1S	Q66K74	1059 aa	Predicted RBP	12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	NLRP10	Q86W26	655 aa		12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	LDHD	Q86WU2	507 aa		12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
EIF3K-212	ENST00000593062	ARFGEF2	Q9Y6D5	1785 aa		12.46	□□□□□ -0.41
EIF3K-212	ENST00000593062	ATP5J2-PTCD1	G3V325	749 aa		12.46	□□□□□ -0.41
EIF3K-212	ENST00000593062	HSPA1A	P0DMV8	641 aa	Known RBP	12.46	□□□□□ -0.41
EIF3K-212	ENST00000593062	HSPA1B	P0DMV9	641 aa	Known RBP	12.46	□□□□□ -0.41
EIF3K-212	ENST00000593062	HSP90AB3P	Q58FF7	597 aa		12.46	□□□□□ -0.41
EIF3K-212	ENST00000593062	GPC2	Q8N158	579 aa		12.46	□□□□□ -0.41
EIF3K-212	ENST00000593062	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.46	□□□□□ -0.41
EIF3K-212	ENST00000593062	CREBZF	Q9NS37	354 aa		12.46	□□□□□ -0.41
EIF3K-212	ENST00000593062	APAF1	O14727	1248 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	PPIP5K2	O43314	1243 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	CAPN15	O75808	1086 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	ITGBL1	O95965	494 aa	Predicted RBP	12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	EPS15	P42566	896 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	AOC3	Q16853	763 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	DUSP27	Q5VZP5	1158 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	ANKRD13D	Q6ZTN6	518 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	NIM1K	Q8IY84	436 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	CNTROB	Q8N137	903 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	ATP6V0A2	Q9Y487	856 aa		12.45	□□□□□ -0.42
EIF3K-212	ENST00000593062	ABCC4	O15439	1325 aa		12.44	□□□□□ -0.42
EIF3K-212	ENST00000593062	LMOD1	P29536	600 aa	Predicted RBP	12.44	□□□□□ -0.42
EIF3K-212	ENST00000593062	DDX46	Q7L014	1031 aa	Known RBP	12.44	□□□□□ -0.42
EIF3K-212	ENST00000593062	FAM89A	Q96GI7	184 aa		12.44	□□□□□ -0.42
EIF3K-212	ENST00000593062	CFAP44	Q96MT7	982 aa		12.44	□□□□□ -0.42
EIF3K-212	ENST00000593062	MBIP	Q9NS73	344 aa		12.44	□□□□□ -0.42
EIF3K-212	ENST00000593062	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	SH3TC1	Q8TE82	1336 aa		12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	PASK	Q96RG2	1323 aa		12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	TMEM88B	A6NKF7	163 aa		12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	BBOX1	O75936	387 aa		12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	FMR1	Q06787	632 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	GRIPAP1	Q4V328	841 aa		12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	DPP8	Q6V1X1	898 aa	Predicted RBP	12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	PNMA8A	Q86V59	439 aa	Predicted RBP	12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	SP8	Q8IXZ3	490 aa		12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	MPND	Q8N594	471 aa		12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	PLBD2	Q8NHP8	589 aa		12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	DBF4	Q9UBU7	674 aa	Predicted RBP	12.43	□□□□□ -0.42
EIF3K-212	ENST00000593062	COL4A5	P29400	1685 aa		12.42	□□□□□ -0.42
EIF3K-212	ENST00000593062	SNED1	Q8TER0	1413 aa		12.42	□□□□□ -0.42
EIF3K-212	ENST00000593062	RAD17	O75943	681 aa		12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	VEGFB	P49765	207 aa		12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	SCNN1D	P51172	638 aa		12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	CXCL9	Q07325	125 aa		12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	RIC3	Q7Z5B4	369 aa		12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	TNS4	Q8IZW8	715 aa		12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	JARID2	Q92833	1246 aa	Predicted RBP	12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	PHAX	Q9H814	394 aa	Known RBP	12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	HYPK	Q9NX55	129 aa		12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	ZNRF3	Q9ULT6	936 aa		12.41	□□□□□ -0.42
EIF3K-212	ENST00000593062	SCN4A	P35499	1836 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms