RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 ARFGEF2Q9Y6D5 1785 aa21.09■□□□□ 0.97
DNMT1-229ENST00000593049 VAMP4O75379 141 aa21.08■□□□□ 0.97
DNMT1-229ENST00000593049 ERFEQ4G0M1 354 aa21.08■□□□□ 0.97
DNMT1-229ENST00000593049 NLRP10Q86W26 655 aa21.08■□□□□ 0.97
DNMT1-229ENST00000593049 NUTM1Q86Y26 1132 aa21.08■□□□□ 0.97
DNMT1-229ENST00000593049 TRIM28Q13263 835 aaKnown RBP21.07■□□□□ 0.96
DNMT1-229ENST00000593049 SLC4A2P04920 1241 aa21.06■□□□□ 0.96
DNMT1-229ENST00000593049 ISCA1Q9BUE6 129 aa21.06■□□□□ 0.96
DNMT1-229ENST00000593049 TRMT112Q9UI30 125 aaKnown RBP21.06■□□□□ 0.96
DNMT1-229ENST00000593049 ABCC12Q96J65 1359 aa21.06■□□□□ 0.96
DNMT1-229ENST00000593049 ALDH1B1P30837 517 aa21.05■□□□□ 0.96
DNMT1-229ENST00000593049 SLC10A5Q5PT55 438 aa21.05■□□□□ 0.96
DNMT1-229ENST00000593049 SOGA3Q5TF21 947 aa21.05■□□□□ 0.96
DNMT1-229ENST00000593049 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
DNMT1-229ENST00000593049 CRY2Q49AN0 593 aa21.04■□□□□ 0.96
DNMT1-229ENST00000593049 NLRP3Q96P20 1036 aa21.04■□□□□ 0.96
DNMT1-229ENST00000593049 TNRC6CQ9HCJ0 1690 aaKnown RBP21.03■□□□□ 0.96
DNMT1-229ENST00000593049 PRPF40BQ6NWY9 871 aaKnown RBP21.03■□□□□ 0.96
DNMT1-229ENST00000593049 KSR2Q6VAB6 950 aa21.03■□□□□ 0.96
DNMT1-229ENST00000593049 RPGRQ92834 1020 aaKnown RBP21.03■□□□□ 0.96
DNMT1-229ENST00000593049 ATP5J2-PTCD1G3V325 749 aa21.02■□□□□ 0.96
DNMT1-229ENST00000593049 TCERG1O14776 1098 aaKnown RBP21.02■□□□□ 0.96
DNMT1-229ENST00000593049 HSP90B1P14625 803 aaKnown RBP21.02■□□□□ 0.96
DNMT1-229ENST00000593049 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
DNMT1-229ENST00000593049 METTL22Q9BUU2 404 aaPredicted RBP21.02■□□□□ 0.96
DNMT1-229ENST00000593049 CACNA1SQ13698 1873 aa21.02■□□□□ 0.96
DNMT1-229ENST00000593049 NEXNQ0ZGT2 675 aa21.01■□□□□ 0.95
DNMT1-229ENST00000593049 FLIIQ13045 1269 aa21.01■□□□□ 0.95
DNMT1-229ENST00000593049 CCDC191Q8NCU4 936 aa21.01■□□□□ 0.95
DNMT1-229ENST00000593049 MYD88Q99836 296 aa21.01■□□□□ 0.95
DNMT1-229ENST00000593049 MAP3K2Q9Y2U5 619 aa21.01■□□□□ 0.95
DNMT1-229ENST00000593049 SLX4Q8IY92 1834 aa21.01■□□□□ 0.95
DNMT1-229ENST00000593049 PI4KAP2A4QPH2 592 aa21■□□□□ 0.95
DNMT1-229ENST00000593049 C21orf2O43822 256 aa21■□□□□ 0.95
DNMT1-229ENST00000593049 HOXA10P31260 410 aaPredicted RBP21■□□□□ 0.95
DNMT1-229ENST00000593049 PI4KAP1Q8N8J0 262 aa21■□□□□ 0.95
DNMT1-229ENST00000593049 ZNF428Q96B54 188 aa21■□□□□ 0.95
DNMT1-229ENST00000593049 RBM17Q96I25 401 aaKnown RBP21■□□□□ 0.95
DNMT1-229ENST00000593049 ZNF784Q8NCA9 323 aaPredicted RBP20.99■□□□□ 0.95
DNMT1-229ENST00000593049 CRAMP1Q96RY5 1269 aa20.99■□□□□ 0.95
DNMT1-229ENST00000593049 ADCY9O60503 1353 aa20.98■□□□□ 0.95
DNMT1-229ENST00000593049 FKBP5Q13451 457 aaPredicted RBP20.98■□□□□ 0.95
DNMT1-229ENST00000593049 G2E3Q7L622 706 aa20.98■□□□□ 0.95
DNMT1-229ENST00000593049 ZBTB38Q8NAP3 1195 aaPredicted RBP20.98■□□□□ 0.95
DNMT1-229ENST00000593049 CWC25Q9NXE8 425 aaPredicted RBP20.98■□□□□ 0.95
DNMT1-229ENST00000593049 HCLS1P14317 486 aaPredicted RBP20.97■□□□□ 0.95
DNMT1-229ENST00000593049 CCDC93Q567U6 631 aa20.97■□□□□ 0.95
DNMT1-229ENST00000593049 SBF1O95248 1867 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 FER1L6Q2WGJ9 1857 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 LMNB1P20700 586 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 GRIPAP1Q4V328 841 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 C9orf131Q5VYM1 1079 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 CC2D2BQ6DHV5 1058 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 TRMT2AQ8IZ69 625 aaKnown RBP20.96■□□□□ 0.95
DNMT1-229ENST00000593049 C7orf43Q8WVR3 580 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 FAM89AQ96GI7 184 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 ZNF219Q9P2Y4 722 aaPredicted RBP20.96■□□□□ 0.95
DNMT1-229ENST00000593049 LTBP3Q9NS15 1303 aa20.96■□□□□ 0.95
DNMT1-229ENST00000593049 LAMB2P55268 1798 aa20.95■□□□□ 0.94
DNMT1-229ENST00000593049 PCCAP05165 728 aaPredicted RBP20.95■□□□□ 0.94
DNMT1-229ENST00000593049 CT47B1P0C2W7 299 aaPredicted RBP20.95■□□□□ 0.94
DNMT1-229ENST00000593049 RTKN2Q8IZC4 609 aa20.95■□□□□ 0.94
DNMT1-229ENST00000593049 ZC3H4Q9UPT8 1303 aaKnown RBP20.95■□□□□ 0.94
DNMT1-229ENST00000593049 DDX60Q8IY21 1712 aaKnown RBP20.95■□□□□ 0.94
DNMT1-229ENST00000593049 IRS4O14654 1257 aaPredicted RBP20.94■□□□□ 0.94
DNMT1-229ENST00000593049 DDX46Q7L014 1031 aaKnown RBP20.94■□□□□ 0.94
DNMT1-229ENST00000593049 SYNE4Q8N205 404 aa20.94■□□□□ 0.94
DNMT1-229ENST00000593049 DNAAF4Q8WXU2 420 aa20.94■□□□□ 0.94
DNMT1-229ENST00000593049 CDCA7LQ96GN5 454 aa20.94■□□□□ 0.94
DNMT1-229ENST00000593049 TAOK3Q9H2K8 898 aa20.94■□□□□ 0.94
DNMT1-229ENST00000593049 RNF181Q9P0P0 153 aa20.94■□□□□ 0.94
DNMT1-229ENST00000593049 NFKBIEO00221 500 aa20.93■□□□□ 0.94
DNMT1-229ENST00000593049 RASSF7Q02833 373 aa20.93■□□□□ 0.94
DNMT1-229ENST00000593049 C3orf67Q6ZVT6 689 aa20.93■□□□□ 0.94
DNMT1-229ENST00000593049 TMX4Q9H1E5 349 aaPredicted RBP20.93■□□□□ 0.94
DNMT1-229ENST00000593049 IGKV5-2P06315 115 aa20.92■□□□□ 0.94
DNMT1-229ENST00000593049 SF3B3Q15393 1217 aaKnown RBP20.92■□□□□ 0.94
DNMT1-229ENST00000593049 NEURL1BA8MQ27 555 aa20.91■□□□□ 0.94
DNMT1-229ENST00000593049 PPEF1O14829 653 aaPredicted RBP20.91■□□□□ 0.94
DNMT1-229ENST00000593049 BBOX1O75936 387 aa20.91■□□□□ 0.94
DNMT1-229ENST00000593049 HNRNPUQ00839 825 aaKnown RBP eCLIP20.91■□□□□ 0.94
DNMT1-229ENST00000593049 CCDC88AQ3V6T2 1871 aa20.91■□□□□ 0.94
DNMT1-229ENST00000593049 TMC4Q7Z404 712 aa20.91■□□□□ 0.94
DNMT1-229ENST00000593049 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
DNMT1-229ENST00000593049 CDHR2Q9BYE9 1310 aa20.91■□□□□ 0.94
DNMT1-229ENST00000593049 ABCC4O15439 1325 aa20.9■□□□□ 0.94
DNMT1-229ENST00000593049 FKBP4Q02790 459 aaKnown RBP eCLIP20.9■□□□□ 0.94
DNMT1-229ENST00000593049 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
DNMT1-229ENST00000593049 RTL5Q5HYW3 569 aaPredicted RBP20.9■□□□□ 0.94
DNMT1-229ENST00000593049 DICER1Q9UPY3 1922 aaKnown RBP20.89■□□□□ 0.93
DNMT1-229ENST00000593049 PDE8AO60658 829 aa20.89■□□□□ 0.93
DNMT1-229ENST00000593049 GRAPQ13588 217 aa20.89■□□□□ 0.93
DNMT1-229ENST00000593049 GRAPLQ8TC17 118 aaPredicted RBP20.89■□□□□ 0.93
DNMT1-229ENST00000593049 PTPRCP08575 1304 aa20.88■□□□□ 0.93
DNMT1-229ENST00000593049 CWF19L2Q2TBE0 894 aaKnown RBP20.88■□□□□ 0.93
DNMT1-229ENST00000593049 PSMD1Q99460 953 aa20.88■□□□□ 0.93
DNMT1-229ENST00000593049 GPBP1L1Q9HC44 474 aaPredicted RBP20.88■□□□□ 0.93
DNMT1-229ENST00000593049 ATP6V0A2Q9Y487 856 aa20.88■□□□□ 0.93
DNMT1-229ENST00000593049 GCKRQ14397 625 aa20.87■□□□□ 0.93
DNMT1-229ENST00000593049 CCDC152Q4G0S7 254 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms