RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 SLC4A10Q6U841 1118 aa26.39■■□□□ 1.82
DNMT1-227ENST00000592342 CWC25Q9NXE8 425 aaPredicted RBP26.39■■□□□ 1.82
DNMT1-227ENST00000592342 KIF16BQ96L93 1317 aa26.39■■□□□ 1.81
DNMT1-227ENST00000592342 A0A0G2JLW4 131 aa26.38■■□□□ 1.81
DNMT1-227ENST00000592342 BRPF1P55201 1214 aaPredicted RBP26.38■■□□□ 1.81
DNMT1-227ENST00000592342 NOB1Q9ULX3 412 aaKnown RBP26.38■■□□□ 1.81
DNMT1-227ENST00000592342 SH3TC1Q8TE82 1336 aa26.38■■□□□ 1.81
DNMT1-227ENST00000592342 H0YIN7 160 aa26.37■■□□□ 1.81
DNMT1-227ENST00000592342 DPEP1P16444 411 aa26.37■■□□□ 1.81
DNMT1-227ENST00000592342 CWF19L2Q2TBE0 894 aaKnown RBP26.37■■□□□ 1.81
DNMT1-227ENST00000592342 LINS1Q8NG48 757 aa26.37■■□□□ 1.81
DNMT1-227ENST00000592342 PDZRN3Q9UPQ7 1066 aa26.37■■□□□ 1.81
DNMT1-227ENST00000592342 PXDNLA1KZ92 1463 aa26.36■■□□□ 1.81
DNMT1-227ENST00000592342 BCAR3O75815 825 aa26.36■■□□□ 1.81
DNMT1-227ENST00000592342 IGKV5-2P06315 115 aa26.36■■□□□ 1.81
DNMT1-227ENST00000592342 CHRNA5P30532 468 aa26.36■■□□□ 1.81
DNMT1-227ENST00000592342 C2CD5Q86YS7 1000 aa26.36■■□□□ 1.81
DNMT1-227ENST00000592342 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
DNMT1-227ENST00000592342 KIF13BQ9NQT8 1826 aa26.36■■□□□ 1.81
DNMT1-227ENST00000592342 DCAF8L1A6NGE4 600 aa26.35■■□□□ 1.81
DNMT1-227ENST00000592342 NEURL1BA8MQ27 555 aa26.35■■□□□ 1.81
DNMT1-227ENST00000592342 RTL5Q5HYW3 569 aaPredicted RBP26.35■■□□□ 1.81
DNMT1-227ENST00000592342 FRAT1Q92837 279 aaPredicted RBP26.35■■□□□ 1.81
DNMT1-227ENST00000592342 FAM89AQ96GI7 184 aa26.35■■□□□ 1.81
DNMT1-227ENST00000592342 API5Q9BZZ5 524 aaKnown RBP26.35■■□□□ 1.81
DNMT1-227ENST00000592342 ABCC12Q96J65 1359 aa26.34■■□□□ 1.81
DNMT1-227ENST00000592342 IPO8O15397 1037 aaKnown RBP26.34■■□□□ 1.81
DNMT1-227ENST00000592342 ZBTB38Q8NAP3 1195 aaPredicted RBP26.34■■□□□ 1.81
DNMT1-227ENST00000592342 WWC3Q9ULE0 1092 aa26.34■■□□□ 1.81
DNMT1-227ENST00000592342 BEND3Q5T5X7 828 aa26.33■■□□□ 1.81
DNMT1-227ENST00000592342 SRCIN1Q9C0H9 1055 aa26.33■■□□□ 1.81
DNMT1-227ENST00000592342 SRCAPQ6ZRS2 3230 aa26.33■■□□□ 1.8
DNMT1-227ENST00000592342 PCCAP05165 728 aaPredicted RBP26.32■■□□□ 1.8
DNMT1-227ENST00000592342 NLRP3Q96P20 1036 aa26.32■■□□□ 1.8
DNMT1-227ENST00000592342 PIM2Q9P1W9 311 aa26.32■■□□□ 1.8
DNMT1-227ENST00000592342 HSP90B1P14625 803 aaKnown RBP26.31■■□□□ 1.8
DNMT1-227ENST00000592342 GCKRQ14397 625 aa26.31■■□□□ 1.8
DNMT1-227ENST00000592342 SLC10A5Q5PT55 438 aa26.31■■□□□ 1.8
DNMT1-227ENST00000592342 SYNE4Q8N205 404 aa26.31■■□□□ 1.8
DNMT1-227ENST00000592342 ARHGAP45Q92619 1136 aa26.31■■□□□ 1.8
DNMT1-227ENST00000592342 ZNF622Q969S3 477 aaKnown RBP eCLIP26.31■■□□□ 1.85e-7■■■□□ 18.1
DNMT1-227ENST00000592342 IRS4O14654 1257 aaPredicted RBP26.3■■□□□ 1.8
DNMT1-227ENST00000592342 HCLS1P14317 486 aaPredicted RBP26.3■■□□□ 1.8
DNMT1-227ENST00000592342 GPR162Q16538 588 aa26.3■■□□□ 1.8
DNMT1-227ENST00000592342 RIC1Q4ADV7 1423 aa26.3■■□□□ 1.8
DNMT1-227ENST00000592342 N4BP2Q86UW6 1770 aaPredicted RBP26.29■■□□□ 1.8
DNMT1-227ENST00000592342 ALDH1L1O75891 902 aa26.29■■□□□ 1.8
DNMT1-227ENST00000592342 JARID2Q92833 1246 aaPredicted RBP26.29■■□□□ 1.8
DNMT1-227ENST00000592342 MASTLQ96GX5 879 aa26.29■■□□□ 1.8
DNMT1-227ENST00000592342 RCAN3Q9UKA8 241 aa26.29■■□□□ 1.8
DNMT1-227ENST00000592342 ANKRD31Q8N7Z5 1873 aa26.28■■□□□ 1.8
DNMT1-227ENST00000592342 SRGNP10124 158 aa26.28■■□□□ 1.8
DNMT1-227ENST00000592342 KCNA3P22001 575 aa26.28■■□□□ 1.8
DNMT1-227ENST00000592342 ZKSCAN2Q63HK3 967 aa26.28■■□□□ 1.8
DNMT1-227ENST00000592342 RPGRQ92834 1020 aaKnown RBP26.28■■□□□ 1.8
DNMT1-227ENST00000592342 BCS1LQ9Y276 419 aa26.28■■□□□ 1.8
DNMT1-227ENST00000592342 KLRG2A4D1S0 409 aaPredicted RBP26.27■■□□□ 1.8
DNMT1-227ENST00000592342 NPR1P16066 1061 aa26.27■■□□□ 1.8
DNMT1-227ENST00000592342 DALRD3Q5D0E6 543 aaKnown RBP26.27■■□□□ 1.8
DNMT1-227ENST00000592342 UBE3BQ7Z3V4 1068 aa26.27■■□□□ 1.8
DNMT1-227ENST00000592342 C9orf78Q9NZ63 289 aaPredicted RBP26.27■■□□□ 1.8
DNMT1-227ENST00000592342 KIAA1551Q9HCM1 1747 aa26.26■■□□□ 1.79
DNMT1-227ENST00000592342 STYK1Q6J9G0 422 aa26.26■■□□□ 1.79
DNMT1-227ENST00000592342 ATF7IPQ6VMQ6 1270 aa26.26■■□□□ 1.79
DNMT1-227ENST00000592342 TTLL6Q8N841 843 aa26.26■■□□□ 1.79
DNMT1-227ENST00000592342 CDHR2Q9BYE9 1310 aa26.25■■□□□ 1.79
DNMT1-227ENST00000592342 H7C1W4 665 aa26.25■■□□□ 1.79
DNMT1-227ENST00000592342 CCT4P50991 539 aaKnown RBP26.25■■□□□ 1.79
DNMT1-227ENST00000592342 CNKSR1Q969H4 720 aa26.25■■□□□ 1.79
DNMT1-227ENST00000592342 CRY2Q49AN0 593 aa26.24■■□□□ 1.79
DNMT1-227ENST00000592342 C3orf67Q6ZVT6 689 aa26.24■■□□□ 1.79
DNMT1-227ENST00000592342 RBM17Q96I25 401 aaKnown RBP26.24■■□□□ 1.79
DNMT1-227ENST00000592342 TNRC6CQ9HCJ0 1690 aaKnown RBP26.24■■□□□ 1.79
DNMT1-227ENST00000592342 PDE8AO60658 829 aa26.23■■□□□ 1.79
DNMT1-227ENST00000592342 TRIM27P14373 513 aa26.23■■□□□ 1.79
DNMT1-227ENST00000592342 CLUAP1Q96AJ1 413 aa26.23■■□□□ 1.79
DNMT1-227ENST00000592342 GRM8O00222 908 aa26.22■■□□□ 1.79
DNMT1-227ENST00000592342 ALDH1B1P30837 517 aa26.22■■□□□ 1.79
DNMT1-227ENST00000592342 FTSJ3Q8IY81 847 aaKnown RBP26.21■■□□□ 1.79
DNMT1-227ENST00000592342 COL11A2P13942 1736 aaPredicted RBP26.21■■□□□ 1.79
DNMT1-227ENST00000592342 YBX3P16989 372 aaKnown RBP eCLIP26.2■■□□□ 1.78
DNMT1-227ENST00000592342 DDX46Q7L014 1031 aaKnown RBP26.2■■□□□ 1.78
DNMT1-227ENST00000592342 ABCC4O15439 1325 aa26.19■■□□□ 1.78
DNMT1-227ENST00000592342 GRIN3BO60391 1043 aa26.19■■□□□ 1.78
DNMT1-227ENST00000592342 SF3B3Q15393 1217 aaKnown RBP26.19■■□□□ 1.78
DNMT1-227ENST00000592342 DLEC1Q9Y238 1755 aa26.19■■□□□ 1.78
DNMT1-227ENST00000592342 HOXA10P31260 410 aaPredicted RBP26.18■■□□□ 1.78
DNMT1-227ENST00000592342 PRPF40BQ6NWY9 871 aaKnown RBP26.18■■□□□ 1.78
DNMT1-227ENST00000592342 TNNQ9UQP3 1299 aa26.18■■□□□ 1.78
DNMT1-227ENST00000592342 DDX60Q8IY21 1712 aaKnown RBP26.17■■□□□ 1.78
DNMT1-227ENST00000592342 CASP7P55210 303 aa26.17■■□□□ 1.78
DNMT1-227ENST00000592342 CTSWP56202 376 aa26.17■■□□□ 1.78
DNMT1-227ENST00000592342 CCDC152Q4G0S7 254 aa26.17■■□□□ 1.78
DNMT1-227ENST00000592342 DZIP1LQ8IYY4 767 aaKnown RBP26.17■■□□□ 1.78
DNMT1-227ENST00000592342 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.17■■□□□ 1.78
DNMT1-227ENST00000592342 CRAMP1Q96RY5 1269 aa26.17■■□□□ 1.78
DNMT1-227ENST00000592342 ZNF219Q9P2Y4 722 aaPredicted RBP26.17■■□□□ 1.78
DNMT1-227ENST00000592342 INTS3Q68E01 1043 aaKnown RBP26.16■■□□□ 1.78
DNMT1-227ENST00000592342 CCDC85AQ96PX6 553 aaPredicted RBP26.16■■□□□ 1.78
DNMT1-227ENST00000592342 PLA2G12BQ9BX93 195 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms