RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 POLA2Q14181 598 aa28.32■■■□□ 2.12
SPHK1-210ENST00000592299 LNPKQ9C0E8 428 aa28.32■■■□□ 2.12
SPHK1-210ENST00000592299 PHF14O94880 888 aa28.31■■■□□ 2.12
SPHK1-210ENST00000592299 EPHA10Q5JZY3 1008 aa28.31■■■□□ 2.12
SPHK1-210ENST00000592299 CHD1LQ86WJ1 897 aa28.31■■■□□ 2.12
SPHK1-210ENST00000592299 ZNF34Q8IZ26 560 aa28.31■■■□□ 2.12
SPHK1-210ENST00000592299 ZBTB47Q9UFB7 747 aaPredicted RBP28.31■■■□□ 2.12
SPHK1-210ENST00000592299 EXOC6BQ9Y2D4 811 aa28.31■■■□□ 2.12
SPHK1-210ENST00000592299 AMIGO3Q86WK7 504 aa28.3■■■□□ 2.12
SPHK1-210ENST00000592299 PCCAP05165 728 aaPredicted RBP28.29■■■□□ 2.12
SPHK1-210ENST00000592299 ZBTB38Q8NAP3 1195 aaPredicted RBP28.29■■■□□ 2.12
SPHK1-210ENST00000592299 FAM89AQ96GI7 184 aa28.29■■■□□ 2.12
SPHK1-210ENST00000592299 UBN2Q6ZU65 1347 aa28.29■■■□□ 2.12
SPHK1-210ENST00000592299 ZPR1O75312 459 aa28.29■■■□□ 2.12
SPHK1-210ENST00000592299 HMGB2P26583 209 aaKnown RBP28.29■■■□□ 2.12
SPHK1-210ENST00000592299 ARHGEF1Q92888 912 aaKnown RBP28.29■■■□□ 2.12
SPHK1-210ENST00000592299 BCL11AQ9H165 835 aa28.29■■■□□ 2.12
SPHK1-210ENST00000592299 NARFQ9UHQ1 456 aa28.29■■■□□ 2.12
SPHK1-210ENST00000592299 BCORQ6W2J9 1755 aa28.28■■■□□ 2.12
SPHK1-210ENST00000592299 TRAPPC3LQ5T215 181 aa28.28■■■□□ 2.12
SPHK1-210ENST00000592299 CLEC4GQ6UXB4 293 aa28.28■■■□□ 2.12
SPHK1-210ENST00000592299 TRMT112Q9UI30 125 aaKnown RBP28.28■■■□□ 2.12
SPHK1-210ENST00000592299 NIP7Q9Y221 180 aaKnown RBP eCLIP28.28■■■□□ 2.12
SPHK1-210ENST00000592299 TNS1Q9HBL0 1735 aaKnown RBP28.28■■■□□ 2.12
SPHK1-210ENST00000592299 SURF6O75683 361 aaKnown RBP28.27■■■□□ 2.12
SPHK1-210ENST00000592299 RFC4P35249 363 aa28.27■■■□□ 2.12
SPHK1-210ENST00000592299 USPL1Q5W0Q7 1092 aa28.27■■■□□ 2.12
SPHK1-210ENST00000592299 SRP68Q9UHB9 627 aaKnown RBP28.27■■■□□ 2.12
SPHK1-210ENST00000592299 FAM177BA6PVY3 158 aa28.25■■■□□ 2.11
SPHK1-210ENST00000592299 FOXO4P98177 505 aa28.25■■■□□ 2.11
SPHK1-210ENST00000592299 RABL6Q3YEC7 729 aaPredicted RBP28.25■■■□□ 2.11
SPHK1-210ENST00000592299 PARP10Q53GL7 1025 aa28.25■■■□□ 2.11
SPHK1-210ENST00000592299 LMBR1LQ6UX01 489 aa28.25■■■□□ 2.11
SPHK1-210ENST00000592299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.24■■■□□ 2.11
SPHK1-210ENST00000592299 PDE4AP27815 886 aa28.24■■■□□ 2.11
SPHK1-210ENST00000592299 SUSD4Q5VX71 490 aa28.24■■■□□ 2.11
SPHK1-210ENST00000592299 SYNE4Q8N205 404 aa28.24■■■□□ 2.11
SPHK1-210ENST00000592299 CHMP3Q9Y3E7 222 aa28.24■■■□□ 2.11
SPHK1-210ENST00000592299 SCN7AQ01118 1682 aa28.23■■■□□ 2.11
SPHK1-210ENST00000592299 SMARCA5O60264 1052 aaPredicted RBP28.22■■■□□ 2.11
SPHK1-210ENST00000592299 ADRA2BP18089 450 aa28.22■■■□□ 2.11
SPHK1-210ENST00000592299 BCL2L12Q9HB09 334 aa28.22■■■□□ 2.11
SPHK1-210ENST00000592299 PA2G4Q9UQ80 394 aaKnown RBP28.22■■■□□ 2.11
SPHK1-210ENST00000592299 UBR3Q6ZT12 1888 aa28.22■■■□□ 2.11
SPHK1-210ENST00000592299 RGL2O15211 777 aa28.22■■■□□ 2.11
SPHK1-210ENST00000592299 BICDL1Q6ZP65 573 aa28.22■■■□□ 2.11
SPHK1-210ENST00000592299 UTP14AQ9BVJ6 771 aaKnown RBP28.22■■■□□ 2.11
SPHK1-210ENST00000592299 OS9Q13438 667 aaPredicted RBP28.21■■■□□ 2.11
SPHK1-210ENST00000592299 LRRCC1Q9C099 1032 aa28.21■■■□□ 2.11
SPHK1-210ENST00000592299 CDHR2Q9BYE9 1310 aa28.21■■■□□ 2.11
SPHK1-210ENST00000592299 C4AP0C0L4 1744 aa28.2■■■□□ 2.11
SPHK1-210ENST00000592299 HSP90AB4PQ58FF6 505 aa28.2■■■□□ 2.11
SPHK1-210ENST00000592299 USP42Q9H9J4 1324 aaKnown RBP28.2■■■□□ 2.11
SPHK1-210ENST00000592299 IRS4O14654 1257 aaPredicted RBP28.2■■■□□ 2.1
SPHK1-210ENST00000592299 SSFA2P28290 1259 aa28.2■■■□□ 2.1
SPHK1-210ENST00000592299 TBC1D9BQ66K14 1250 aa28.2■■■□□ 2.1
SPHK1-210ENST00000592299 RAB11FIP3O75154 756 aa28.19■■■□□ 2.1
SPHK1-210ENST00000592299 SF3B2Q13435 895 aaKnown RBP28.18■■■□□ 2.1
SPHK1-210ENST00000592299 KLHDC4Q8TBB5 520 aa28.18■■■□□ 2.1
SPHK1-210ENST00000592299 PLA2G12BQ9BX93 195 aa28.18■■■□□ 2.1
SPHK1-210ENST00000592299 TFCP2L1Q9NZI6 479 aa28.18■■■□□ 2.1
SPHK1-210ENST00000592299 NOP58Q9Y2X3 529 aaKnown RBP28.18■■■□□ 2.1
SPHK1-210ENST00000592299 SH3TC1Q8TE82 1336 aa28.18■■■□□ 2.1
SPHK1-210ENST00000592299 EN1Q05925 392 aaPredicted RBP28.18■■■□□ 2.1
SPHK1-210ENST00000592299 SETDB2Q96T68 719 aa28.17■■■□□ 2.1
SPHK1-210ENST00000592299 SIL1Q9H173 461 aa28.17■■■□□ 2.1
SPHK1-210ENST00000592299 RGPD3A6NKT7 1758 aaPredicted RBP28.16■■■□□ 2.1
SPHK1-210ENST00000592299 RGPD4Q7Z3J3 1758 aa28.16■■■□□ 2.1
SPHK1-210ENST00000592299 C16orf71Q8IYS4 520 aaPredicted RBP28.16■■■□□ 2.1
SPHK1-210ENST00000592299 NTSR2O95665 410 aa28.15■■■□□ 2.1
SPHK1-210ENST00000592299 G3BP1Q13283 466 aaKnown RBP eCLIP28.15■■■□□ 2.1
SPHK1-210ENST00000592299 ZNF827Q17R98 1081 aa28.15■■■□□ 2.1
SPHK1-210ENST00000592299 KIF1BPQ96EK5 621 aa28.15■■■□□ 2.1
SPHK1-210ENST00000592299 PDE8AO60658 829 aa28.15■■■□□ 2.1
SPHK1-210ENST00000592299 RFX5P48382 616 aaPredicted RBP28.15■■■□□ 2.1
SPHK1-210ENST00000592299 EZH2Q15910 746 aaKnown RBP28.15■■■□□ 2.1
SPHK1-210ENST00000592299 NUTM1Q86Y26 1132 aa28.15■■■□□ 2.1
SPHK1-210ENST00000592299 RHPN1Q8TCX5 695 aa28.15■■■□□ 2.1
SPHK1-210ENST00000592299 CCDC85AQ96PX6 553 aaPredicted RBP28.15■■■□□ 2.1
SPHK1-210ENST00000592299 PTPN12Q05209 780 aaKnown RBP28.14■■■□□ 2.1
SPHK1-210ENST00000592299 AKT1S1Q96B36 256 aa28.14■■■□□ 2.1
SPHK1-210ENST00000592299 IL1RAPL2Q9NP60 686 aa28.14■■■□□ 2.1
SPHK1-210ENST00000592299 COPRSQ9NQ92 184 aa28.13■■■□□ 2.09
SPHK1-210ENST00000592299 HCLS1P14317 486 aaPredicted RBP28.13■■■□□ 2.09
SPHK1-210ENST00000592299 CTSWP56202 376 aa28.13■■■□□ 2.09
SPHK1-210ENST00000592299 ERC1Q8IUD2 1116 aa28.13■■■□□ 2.09
SPHK1-210ENST00000592299 CAMKK2Q96RR4 588 aa28.13■■■□□ 2.09
SPHK1-210ENST00000592299 MYH3P11055 1940 aa28.12■■■□□ 2.09
SPHK1-210ENST00000592299 CSF1RP07333 972 aa28.12■■■□□ 2.09
SPHK1-210ENST00000592299 CCDC57Q2TAC2 916 aa28.12■■■□□ 2.09
SPHK1-210ENST00000592299 GTF2E1P29083 439 aaPredicted RBP28.11■■■□□ 2.09
SPHK1-210ENST00000592299 BAG6P46379 1132 aa28.11■■■□□ 2.09
SPHK1-210ENST00000592299 FAM161AQ3B820 660 aa28.11■■■□□ 2.09
SPHK1-210ENST00000592299 TTLL11Q8NHH1 800 aa28.11■■■□□ 2.09
SPHK1-210ENST00000592299 HSP90B1P14625 803 aaKnown RBP28.11■■■□□ 2.09
SPHK1-210ENST00000592299 OTUD7AQ8TE49 926 aaPredicted RBP28.11■■■□□ 2.09
SPHK1-210ENST00000592299 MSH5O43196 834 aa28.09■■■□□ 2.09
SPHK1-210ENST00000592299 GYS1P13807 737 aa28.09■■■□□ 2.09
SPHK1-210ENST00000592299 NBPF5PQ86XG9 351 aaPredicted RBP28.09■■■□□ 2.09
SPHK1-210ENST00000592299 PLEKHM2Q8IWE5 1019 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms