RNA–Protein interactions for RNA: ENST00000591633.2

LGI4-206, Transcript of leucine rich repeat LGI family member 4, human

TSL 1 (best) BASIC

Gene LGI4, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI4-206	ENST00000591633	RPGR	Q92834	1020 aa	Known RBP	27.76	■■■□□ 2.03
LGI4-206	ENST00000591633	RIC1	Q4ADV7	1423 aa		27.75	■■■□□ 2.03
LGI4-206	ENST00000591633	CCDC93	Q567U6	631 aa		27.75	■■■□□ 2.03
LGI4-206	ENST00000591633	RNF123	Q5XPI4	1314 aa		27.74	■■■□□ 2.03
LGI4-206	ENST00000591633	ARFGEF2	Q9Y6D5	1785 aa		27.74	■■■□□ 2.03
LGI4-206	ENST00000591633	SENP3-EIF4A1	A0A087X0R7	540 aa		27.74	■■■□□ 2.03
LGI4-206	ENST00000591633	NLRP3	Q96P20	1036 aa		27.74	■■■□□ 2.03
LGI4-206	ENST00000591633	NMRK2	Q9NPI5	230 aa		27.74	■■■□□ 2.03
LGI4-206	ENST00000591633	CACNA1S	Q13698	1873 aa		27.73	■■■□□ 2.03
LGI4-206	ENST00000591633	FER1L6	Q2WGJ9	1857 aa		27.73	■■■□□ 2.03
LGI4-206	ENST00000591633	SLC10A5	Q5PT55	438 aa		27.73	■■■□□ 2.03
LGI4-206	ENST00000591633	NLRP10	Q86W26	655 aa		27.73	■■■□□ 2.03
LGI4-206	ENST00000591633	C8orf58	Q8NAV2	365 aa		27.73	■■■□□ 2.03
LGI4-206	ENST00000591633	CCDC88A	Q3V6T2	1871 aa		27.72	■■■□□ 2.03
LGI4-206	ENST00000591633	HOXA10	P31260	410 aa	Predicted RBP	27.72	■■■□□ 2.03
LGI4-206	ENST00000591633	RTKN2	Q8IZC4	609 aa		27.72	■■■□□ 2.03
LGI4-206	ENST00000591633	RBM17	Q96I25	401 aa	Known RBP	27.72	■■■□□ 2.03
LGI4-206	ENST00000591633	IL16	Q14005	1332 aa		27.71	■■■□□ 2.03
LGI4-206	ENST00000591633	GLTPD2	A6NH11	291 aa		27.71	■■■□□ 2.03
LGI4-206	ENST00000591633	CCDC30	Q5VVM6	783 aa		27.71	■■■□□ 2.03
LGI4-206	ENST00000591633	TRMT112	Q9UI30	125 aa	Known RBP	27.71	■■■□□ 2.03
LGI4-206	ENST00000591633	TOMM70	O94826	608 aa		27.7	■■■□□ 2.02
LGI4-206	ENST00000591633	DPY19L2	Q6NUT2	758 aa		27.7	■■■□□ 2.02
LGI4-206	ENST00000591633	C16orf71	Q8IYS4	520 aa	Predicted RBP	27.7	■■■□□ 2.02
LGI4-206	ENST00000591633	CC2D2B	Q6DHV5	1058 aa		27.69	■■■□□ 2.02
LGI4-206	ENST00000591633	CRAMP1	Q96RY5	1269 aa		27.69	■■■□□ 2.02
LGI4-206	ENST00000591633	RRAGC	Q9HB90	399 aa		27.69	■■■□□ 2.02
LGI4-206	ENST00000591633	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.68	■■■□□ 2.02
LGI4-206	ENST00000591633	GOLGA2	Q08379	1002 aa		27.68	■■■□□ 2.02
LGI4-206	ENST00000591633	TSR2	Q969E8	191 aa	Known RBP	27.68	■■■□□ 2.02
LGI4-206	ENST00000591633	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.68	■■■□□ 2.02
LGI4-206	ENST00000591633	SH3TC1	Q8TE82	1336 aa		27.67	■■■□□ 2.02
LGI4-206	ENST00000591633	RIC3	Q7Z5B4	369 aa		27.67	■■■□□ 2.02
LGI4-206	ENST00000591633	FAM9B	Q8IZU0	186 aa		27.67	■■■□□ 2.02
LGI4-206	ENST00000591633	ANKRD36C	Q5JPF3	1778 aa		27.67	■■■□□ 2.02
LGI4-206	ENST00000591633	ISCA1	Q9BUE6	129 aa		27.66	■■■□□ 2.02
LGI4-206	ENST00000591633	PHAX	Q9H814	394 aa	Known RBP	27.66	■■■□□ 2.02
LGI4-206	ENST00000591633	SALL2	Q9Y467	1007 aa	Predicted RBP	27.66	■■■□□ 2.02
LGI4-206	ENST00000591633	GRIPAP1	Q4V328	841 aa		27.65	■■■□□ 2.02
LGI4-206	ENST00000591633	OLFM4	Q6UX06	510 aa		27.65	■■■□□ 2.02
LGI4-206	ENST00000591633	C3orf67	Q6ZVT6	689 aa		27.65	■■■□□ 2.02
LGI4-206	ENST00000591633	WDR63	Q8IWG1	891 aa		27.65	■■■□□ 2.02
LGI4-206	ENST00000591633	TSPYL6	Q8N831	410 aa		27.65	■■■□□ 2.02
LGI4-206	ENST00000591633	ATP5J2-PTCD1	G3V325	749 aa		27.64	■■■□□ 2.02
LGI4-206	ENST00000591633	TRIM28	Q13263	835 aa	Known RBP	27.64	■■■□□ 2.02
LGI4-206	ENST00000591633	TMX4	Q9H1E5	349 aa	Predicted RBP	27.64	■■■□□ 2.02
LGI4-206	ENST00000591633	DICER1	Q9UPY3	1922 aa	Known RBP	27.64	■■■□□ 2.02
LGI4-206	ENST00000591633	DDX58	O95786	925 aa	Known RBP	27.63	■■■□□ 2.01
LGI4-206	ENST00000591633	HCLS1	P14317	486 aa	Predicted RBP	27.63	■■■□□ 2.01
LGI4-206	ENST00000591633	VEGFA	P15692	232 aa	Predicted RBP	27.63	■■■□□ 2.01
LGI4-206	ENST00000591633	TWISTNB	Q3B726	338 aa	Predicted RBP	27.62	■■■□□ 2.01
LGI4-206	ENST00000591633	SYNE4	Q8N205	404 aa		27.62	■■■□□ 2.01
LGI4-206	ENST00000591633	RBM46	Q8TBY0	533 aa	Known RBP	27.62	■■■□□ 2.01
LGI4-206	ENST00000591633	STK31	Q9BXU1	1019 aa		27.62	■■■□□ 2.01
LGI4-206	ENST00000591633	TIAM2	Q8IVF5	1701 aa		27.61	■■■□□ 2.01
LGI4-206	ENST00000591633	PPEF1	O14829	653 aa	Predicted RBP	27.61	■■■□□ 2.01
LGI4-206	ENST00000591633	HSPA6	P17066	643 aa		27.61	■■■□□ 2.01
LGI4-206	ENST00000591633	PSMD1	Q99460	953 aa		27.61	■■■□□ 2.01
LGI4-206	ENST00000591633	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.61	■■■□□ 2.01
LGI4-206	ENST00000591633	BBOX1	O75936	387 aa		27.59	■■■□□ 2.01
LGI4-206	ENST00000591633	DDX46	Q7L014	1031 aa	Known RBP	27.59	■■■□□ 2.01
LGI4-206	ENST00000591633	FAM89A	Q96GI7	184 aa		27.59	■■■□□ 2.01
LGI4-206	ENST00000591633	TCERG1	O14776	1098 aa	Known RBP	27.58	■■■□□ 2.01
LGI4-206	ENST00000591633	IARS	P41252	1262 aa	Known RBP	27.58	■■■□□ 2.01
LGI4-206	ENST00000591633	ZNF428	Q96B54	188 aa		27.58	■■■□□ 2.01
LGI4-206	ENST00000591633	MYD88	Q99836	296 aa		27.57	■■■□□ 2
LGI4-206	ENST00000591633	ABCC4	O15439	1325 aa		27.57	■■■□□ 2
LGI4-206	ENST00000591633	FSTL1	Q12841	308 aa		27.56	■■■□□ 2
LGI4-206	ENST00000591633	ATP6V0A2	Q9Y487	856 aa		27.56	■■■□□ 2
LGI4-206	ENST00000591633	FANCI	Q9NVI1	1328 aa		27.56	■■■□□ 2
LGI4-206	ENST00000591633	HSP90B1	P14625	803 aa	Known RBP	27.55	■■■□□ 2
LGI4-206	ENST00000591633	CCDC191	Q8NCU4	936 aa		27.55	■■■□□ 2
LGI4-206	ENST00000591633	JDP2	Q8WYK2	163 aa		27.55	■■■□□ 2
LGI4-206	ENST00000591633	METTL22	Q9BUU2	404 aa	Predicted RBP	27.55	■■■□□ 2
LGI4-206	ENST00000591633	DDN	O94850	711 aa	Predicted RBP	27.54	■■■□□ 2
LGI4-206	ENST00000591633	SLC4A2	P04920	1241 aa		27.54	■■■□□ 2
LGI4-206	ENST00000591633	KSR2	Q6VAB6	950 aa		27.54	■■■□□ 2
LGI4-206	ENST00000591633	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.54	■■■□□ 2
LGI4-206	ENST00000591633	SNED1	Q8TER0	1413 aa		27.53	■■■□□ 2
LGI4-206	ENST00000591633	IRS4	O14654	1257 aa	Predicted RBP	27.53	■■■□□ 2
LGI4-206	ENST00000591633	GRAP	Q13588	217 aa		27.53	■■■□□ 2
LGI4-206	ENST00000591633	SF3B3	Q15393	1217 aa	Known RBP	27.53	■■■□□ 2
LGI4-206	ENST00000591633	RTL5	Q5HYW3	569 aa	Predicted RBP	27.53	■■■□□ 2
LGI4-206	ENST00000591633	SP8	Q8IXZ3	490 aa		27.53	■■■□□ 2
LGI4-206	ENST00000591633	GRAPL	Q8TC17	118 aa	Predicted RBP	27.53	■■■□□ 2
LGI4-206	ENST00000591633	TMC4	Q7Z404	712 aa		27.52	■■■□□ 2
LGI4-206	ENST00000591633	SMC1B	Q8NDV3	1235 aa		27.52	■■■□□ 2
LGI4-206	ENST00000591633	MYH16	Q9H6N6	1097 aa		27.52	■■■□□ 2
LGI4-206	ENST00000591633	CWC25	Q9NXE8	425 aa	Predicted RBP	27.52	■■■□□ 2
LGI4-206	ENST00000591633	MAP3K2	Q9Y2U5	619 aa		27.52	■■■□□ 2
LGI4-206	ENST00000591633	WDR90	Q96KV7	1748 aa		27.51	■■□□□ 1.99
LGI4-206	ENST00000591633	PI4KAP2	A4QPH2	592 aa		27.51	■■□□□ 1.99
LGI4-206	ENST00000591633	POTEC	B2RU33	542 aa		27.51	■■□□□ 1.99
LGI4-206	ENST00000591633	PI4KAP1	Q8N8J0	262 aa		27.51	■■□□□ 1.99
LGI4-206	ENST00000591633	APLP1	P51693	650 aa		27.5	■■□□□ 1.99
LGI4-206	ENST00000591633	EXOSC9	Q06265	439 aa	Known RBP	27.5	■■□□□ 1.99
LGI4-206	ENST00000591633	NEXN	Q0ZGT2	675 aa		27.5	■■□□□ 1.99
LGI4-206	ENST00000591633	SUPT20H	Q8NEM7	779 aa		27.5	■■□□□ 1.99
LGI4-206	ENST00000591633	VPS33B	Q9H267	617 aa		27.5	■■□□□ 1.99
LGI4-206	ENST00000591633	LAMB2	P55268	1798 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms