RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 STYK1Q6J9G0 422 aa27.68■■■□□ 2.02
R3HDM4-206ENST00000590454 LRP10Q7Z4F1 713 aa27.68■■■□□ 2.02
R3HDM4-206ENST00000590454 CNBD1Q8NA66 436 aa27.68■■■□□ 2.02
R3HDM4-206ENST00000590454 CHPF2Q9P2E5 772 aa27.68■■■□□ 2.02
R3HDM4-206ENST00000590454 VAMP4O75379 141 aa27.67■■■□□ 2.02
R3HDM4-206ENST00000590454 YTHDC1Q96MU7 727 aaKnown RBP27.67■■■□□ 2.02
R3HDM4-206ENST00000590454 ANKRD31Q8N7Z5 1873 aa27.66■■■□□ 2.02
R3HDM4-206ENST00000590454 IQCA1LA6NCM1 817 aa27.66■■■□□ 2.02
R3HDM4-206ENST00000590454 ST5P78524 1137 aa27.66■■■□□ 2.02
R3HDM4-206ENST00000590454 FER1L6Q2WGJ9 1857 aa27.66■■■□□ 2.02
R3HDM4-206ENST00000590454 SRGNP10124 158 aa27.65■■■□□ 2.02
R3HDM4-206ENST00000590454 PRPF40BQ6NWY9 871 aaKnown RBP27.65■■■□□ 2.02
R3HDM4-206ENST00000590454 MASTLQ96GX5 879 aa27.65■■■□□ 2.02
R3HDM4-206ENST00000590454 DICER1Q9UPY3 1922 aaKnown RBP27.65■■■□□ 2.02
R3HDM4-206ENST00000590454 ERBB4Q15303 1308 aa27.65■■■□□ 2.02
R3HDM4-206ENST00000590454 CNTNAP1P78357 1384 aa27.64■■■□□ 2.02
R3HDM4-206ENST00000590454 LDHDQ86WU2 507 aa27.64■■■□□ 2.02
R3HDM4-206ENST00000590454 FOXN1O15353 648 aa27.63■■■□□ 2.01
R3HDM4-206ENST00000590454 CAMTA2O94983 1202 aa27.63■■■□□ 2.01
R3HDM4-206ENST00000590454 TTLL7Q6ZT98 887 aa27.63■■■□□ 2.01
R3HDM4-206ENST00000590454 DDX21Q9NR30 783 aaKnown RBP eCLIP27.63■■■□□ 2.01
R3HDM4-206ENST00000590454 PRDM10Q9NQV6 1147 aa27.62■■■□□ 2.01
R3HDM4-206ENST00000590454 PASKQ96RG2 1323 aa27.62■■■□□ 2.01
R3HDM4-206ENST00000590454 SCN7AQ01118 1682 aa27.62■■■□□ 2.01
R3HDM4-206ENST00000590454 COL11A2P13942 1736 aaPredicted RBP27.61■■■□□ 2.01
R3HDM4-206ENST00000590454 DZIP3Q86Y13 1208 aaKnown RBP27.61■■■□□ 2.01
R3HDM4-206ENST00000590454 L3MBTL3Q96JM7 780 aaPredicted RBP27.61■■■□□ 2.01
R3HDM4-206ENST00000590454 TAF1DQ9H5J8 278 aaPredicted RBP27.61■■■□□ 2.01
R3HDM4-206ENST00000590454 CCDC30Q5VVM6 783 aa27.6■■■□□ 2.01
R3HDM4-206ENST00000590454 DBF4Q9UBU7 674 aaPredicted RBP27.6■■■□□ 2.01
R3HDM4-206ENST00000590454 XAGE3Q8WTP9 111 aa27.59■■■□□ 2.01
R3HDM4-206ENST00000590454 AIDAQ96BJ3 306 aa27.59■■■□□ 2.01
R3HDM4-206ENST00000590454 TMEM88BA6NKF7 163 aa27.58■■■□□ 2.01
R3HDM4-206ENST00000590454 CTCFP49711 727 aaPredicted RBP27.58■■■□□ 2.01
R3HDM4-206ENST00000590454 AIMP1Q12904 312 aaKnown RBP27.58■■■□□ 2.01
R3HDM4-206ENST00000590454 CCDC93Q567U6 631 aa27.58■■■□□ 2.01
R3HDM4-206ENST00000590454 PHAXQ9H814 394 aaKnown RBP27.58■■■□□ 2.01
R3HDM4-206ENST00000590454 COPS6Q7L5N1 327 aa27.57■■■□□ 2
R3HDM4-206ENST00000590454 C7orf43Q8WVR3 580 aa27.57■■■□□ 2
R3HDM4-206ENST00000590454 BCORQ6W2J9 1755 aa27.57■■■□□ 2
R3HDM4-206ENST00000590454 SLX4Q8IY92 1834 aa27.57■■■□□ 2
R3HDM4-206ENST00000590454 VEGFBP49765 207 aa27.56■■■□□ 2
R3HDM4-206ENST00000590454 ITGBL1O95965 494 aaPredicted RBP27.55■■■□□ 2
R3HDM4-206ENST00000590454 HLFQ16534 295 aa27.55■■■□□ 2
R3HDM4-206ENST00000590454 CLEC4GQ6UXB4 293 aa27.55■■■□□ 2
R3HDM4-206ENST00000590454 G2E3Q7L622 706 aa27.55■■■□□ 2
R3HDM4-206ENST00000590454 NBPF5PQ86XG9 351 aaPredicted RBP27.55■■■□□ 2
R3HDM4-206ENST00000590454 HYPKQ9NX55 129 aa27.55■■■□□ 2
R3HDM4-206ENST00000590454 NPR1P16066 1061 aa27.54■■■□□ 2
R3HDM4-206ENST00000590454 FKBP4Q02790 459 aaKnown RBP eCLIP27.54■■■□□ 2
R3HDM4-206ENST00000590454 EAPPQ56P03 285 aaPredicted RBP27.54■■■□□ 2
R3HDM4-206ENST00000590454 ZBTB3Q9H5J0 574 aa27.54■■■□□ 2
R3HDM4-206ENST00000590454 SLC4A2P04920 1241 aa27.53■■■□□ 2
R3HDM4-206ENST00000590454 HACL1Q9UJ83 578 aa27.53■■■□□ 2
R3HDM4-206ENST00000590454 CLEC11AQ9Y240 323 aa27.53■■■□□ 2
R3HDM4-206ENST00000590454 MAP3K15Q6ZN16 1313 aa27.52■■■□□ 2
R3HDM4-206ENST00000590454 STK31Q9BXU1 1019 aa27.52■■■□□ 2
R3HDM4-206ENST00000590454 ZNF652Q9Y2D9 606 aa27.52■■■□□ 2
R3HDM4-206ENST00000590454 SCN4AP35499 1836 aa27.51■■□□□ 1.99
R3HDM4-206ENST00000590454 KIF6Q6ZMV9 814 aa27.51■■□□□ 1.99
R3HDM4-206ENST00000590454 ZNF277Q9NRM2 450 aaPredicted RBP27.51■■□□□ 1.99
R3HDM4-206ENST00000590454 WBP1LQ9NX94 342 aa27.51■■□□□ 1.99
R3HDM4-206ENST00000590454 ZNF541Q9H0D2 1346 aa27.5■■□□□ 1.99
R3HDM4-206ENST00000590454 KLRG2A4D1S0 409 aaPredicted RBP27.5■■□□□ 1.99
R3HDM4-206ENST00000590454 EPHX2P34913 555 aa27.5■■□□□ 1.99
R3HDM4-206ENST00000590454 TPTE2Q6XPS3 522 aa27.5■■□□□ 1.99
R3HDM4-206ENST00000590454 RTKN2Q8IZC4 609 aa27.5■■□□□ 1.99
R3HDM4-206ENST00000590454 CHMP4AQ9BY43 222 aa27.5■■□□□ 1.99
R3HDM4-206ENST00000590454 PNMA8AQ86V59 439 aaPredicted RBP27.49■■□□□ 1.99
R3HDM4-206ENST00000590454 SSH1Q8WYL5 1049 aa27.49■■□□□ 1.99
R3HDM4-206ENST00000590454 BCL2L13Q9BXK5 485 aa27.49■■□□□ 1.99
R3HDM4-206ENST00000590454 ARFGEF2Q9Y6D5 1785 aa27.49■■□□□ 1.99
R3HDM4-206ENST00000590454 NUP98P52948 1817 aa27.48■■□□□ 1.99
R3HDM4-206ENST00000590454 ERVV-1B6SEH8 477 aa27.48■■□□□ 1.99
R3HDM4-206ENST00000590454 LBX1P52954 281 aa27.47■■□□□ 1.99
R3HDM4-206ENST00000590454 DEFB115Q30KQ5 88 aa27.47■■□□□ 1.99
R3HDM4-206ENST00000590454 CACNA1SQ13698 1873 aa27.47■■□□□ 1.99
R3HDM4-206ENST00000590454 RASSF10A6NK89 507 aa27.46■■□□□ 1.99
R3HDM4-206ENST00000590454 ANKRD13DQ6ZTN6 518 aa27.46■■□□□ 1.99
R3HDM4-206ENST00000590454 CNTROBQ8N137 903 aa27.46■■□□□ 1.99
R3HDM4-206ENST00000590454 MRPL50Q8N5N7 158 aaKnown RBP27.46■■□□□ 1.99
R3HDM4-206ENST00000590454 FZD9O00144 591 aa27.45■■□□□ 1.98
R3HDM4-206ENST00000590454 RGL2O15211 777 aa27.45■■□□□ 1.98
R3HDM4-206ENST00000590454 ALDH1B1P30837 517 aa27.45■■□□□ 1.98
R3HDM4-206ENST00000590454 NIP7Q9Y221 180 aaKnown RBP eCLIP27.45■■□□□ 1.98
R3HDM4-206ENST00000590454 CACNA1FO60840 1977 aa27.45■■□□□ 1.98
R3HDM4-206ENST00000590454 CT47B1P0C2W7 299 aaPredicted RBP27.44■■□□□ 1.98
R3HDM4-206ENST00000590454 IARSP41252 1262 aaKnown RBP27.44■■□□□ 1.98
R3HDM4-206ENST00000590454 FLIIQ13045 1269 aa27.44■■□□□ 1.98
R3HDM4-206ENST00000590454 OLFM4Q6UX06 510 aa27.44■■□□□ 1.98
R3HDM4-206ENST00000590454 GIGYF2Q6Y7W6 1299 aaKnown RBP27.44■■□□□ 1.98
R3HDM4-206ENST00000590454 SYNE4Q8N205 404 aa27.44■■□□□ 1.98
R3HDM4-206ENST00000590454 PLBD2Q8NHP8 589 aa27.44■■□□□ 1.98
R3HDM4-206ENST00000590454 RNF123Q5XPI4 1314 aa27.43■■□□□ 1.98
R3HDM4-206ENST00000590454 RARSP54136 660 aaKnown RBP27.43■■□□□ 1.98
R3HDM4-206ENST00000590454 MAP1SQ66K74 1059 aaPredicted RBP27.43■■□□□ 1.98
R3HDM4-206ENST00000590454 GPTP24298 496 aa27.42■■□□□ 1.98
R3HDM4-206ENST00000590454 MAP2K1Q02750 393 aaPredicted RBP27.42■■□□□ 1.98
R3HDM4-206ENST00000590454 GPC2Q8N158 579 aa27.42■■□□□ 1.98
R3HDM4-206ENST00000590454 ALDH1L2Q3SY69 923 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms