RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CHRNA5P30532 468 aa27.18■■□□□ 1.94
ATG4D-212ENST00000590096 NEXNQ0ZGT2 675 aa27.18■■□□□ 1.94
ATG4D-212ENST00000590096 C2CD5Q86YS7 1000 aa27.18■■□□□ 1.94
ATG4D-212ENST00000590096 SSH1Q8WYL5 1049 aa27.18■■□□□ 1.94
ATG4D-212ENST00000590096 RNF123Q5XPI4 1314 aa27.17■■□□□ 1.94
ATG4D-212ENST00000590096 ERFEQ4G0M1 354 aa27.17■■□□□ 1.94
ATG4D-212ENST00000590096 MRPL50Q8N5N7 158 aaKnown RBP27.17■■□□□ 1.94
ATG4D-212ENST00000590096 TRMT112Q9UI30 125 aaKnown RBP27.17■■□□□ 1.94
ATG4D-212ENST00000590096 TRIM28Q13263 835 aaKnown RBP27.16■■□□□ 1.94
ATG4D-212ENST00000590096 SMC4Q9NTJ3 1288 aa27.16■■□□□ 1.94
ATG4D-212ENST00000590096 WWC3Q9ULE0 1092 aa27.16■■□□□ 1.94
ATG4D-212ENST00000590096 DNAAF4Q8WXU2 420 aa27.15■■□□□ 1.94
ATG4D-212ENST00000590096 BCL2L13Q9BXK5 485 aa27.15■■□□□ 1.94
ATG4D-212ENST00000590096 PIM2Q9P1W9 311 aa27.15■■□□□ 1.94
ATG4D-212ENST00000590096 ABCC12Q96J65 1359 aa27.14■■□□□ 1.94
ATG4D-212ENST00000590096 KCNA3P22001 575 aa27.14■■□□□ 1.94
ATG4D-212ENST00000590096 CCDC191Q8NCU4 936 aa27.14■■□□□ 1.94
ATG4D-212ENST00000590096 DLEC1Q9Y238 1755 aa27.14■■□□□ 1.93
ATG4D-212ENST00000590096 SH3TC1Q8TE82 1336 aa27.14■■□□□ 1.93
ATG4D-212ENST00000590096 BRCA1P38398 1863 aaKnown RBP27.13■■□□□ 1.93
ATG4D-212ENST00000590096 CWC25Q9NXE8 425 aaPredicted RBP27.13■■□□□ 1.93
ATG4D-212ENST00000590096 BCS1LQ9Y276 419 aa27.12■■□□□ 1.93
ATG4D-212ENST00000590096 RIC1Q4ADV7 1423 aa27.12■■□□□ 1.93
ATG4D-212ENST00000590096 COL11A2P13942 1736 aaPredicted RBP27.12■■□□□ 1.93
ATG4D-212ENST00000590096 DALRD3Q5D0E6 543 aaKnown RBP27.11■■□□□ 1.93
ATG4D-212ENST00000590096 ZNF622Q969S3 477 aaKnown RBP eCLIP27.11■■□□□ 1.93
ATG4D-212ENST00000590096 PTPRCP08575 1304 aa27.11■■□□□ 1.93
ATG4D-212ENST00000590096 F6X3S4 739 aa27.1■■□□□ 1.93
ATG4D-212ENST00000590096 YBX3P16989 372 aaKnown RBP eCLIP27.1■■□□□ 1.93
ATG4D-212ENST00000590096 RARSP54136 660 aaKnown RBP27.1■■□□□ 1.93
ATG4D-212ENST00000590096 TNRC6CQ9HCJ0 1690 aaKnown RBP27.1■■□□□ 1.93
ATG4D-212ENST00000590096 KLRG2A4D1S0 409 aaPredicted RBP27.09■■□□□ 1.93
ATG4D-212ENST00000590096 GRIN3BO60391 1043 aa27.09■■□□□ 1.93
ATG4D-212ENST00000590096 IGKV5-2P06315 115 aa27.09■■□□□ 1.93
ATG4D-212ENST00000590096 SRGNP10124 158 aa27.09■■□□□ 1.93
ATG4D-212ENST00000590096 SLC10A5Q5PT55 438 aa27.09■■□□□ 1.93
ATG4D-212ENST00000590096 FAM89AQ96GI7 184 aa27.09■■□□□ 1.93
ATG4D-212ENST00000590096 MASTLQ96GX5 879 aa27.09■■□□□ 1.93
ATG4D-212ENST00000590096 NLRP3Q96P20 1036 aa27.09■■□□□ 1.93
ATG4D-212ENST00000590096 TTLL6Q8N841 843 aa27.08■■□□□ 1.93
ATG4D-212ENST00000590096 ZBTB38Q8NAP3 1195 aaPredicted RBP27.08■■□□□ 1.93
ATG4D-212ENST00000590096 NEURL1BA8MQ27 555 aa27.07■■□□□ 1.92
ATG4D-212ENST00000590096 NPR1P16066 1061 aa27.07■■□□□ 1.92
ATG4D-212ENST00000590096 CWF19L2Q2TBE0 894 aaKnown RBP27.07■■□□□ 1.92
ATG4D-212ENST00000590096 RTL5Q5HYW3 569 aaPredicted RBP27.07■■□□□ 1.92
ATG4D-212ENST00000590096 STYK1Q6J9G0 422 aa27.07■■□□□ 1.92
ATG4D-212ENST00000590096 SYNE4Q8N205 404 aa27.07■■□□□ 1.92
ATG4D-212ENST00000590096 LINS1Q8NG48 757 aa27.07■■□□□ 1.92
ATG4D-212ENST00000590096 HCLS1P14317 486 aaPredicted RBP27.06■■□□□ 1.92
ATG4D-212ENST00000590096 SLC4A10Q6U841 1118 aa27.06■■□□□ 1.92
ATG4D-212ENST00000590096 CNKSR1Q969H4 720 aa27.06■■□□□ 1.92
ATG4D-212ENST00000590096 YTHDC1Q96MU7 727 aaKnown RBP27.06■■□□□ 1.92
ATG4D-212ENST00000590096 PCCAP05165 728 aaPredicted RBP27.05■■□□□ 1.92
ATG4D-212ENST00000590096 HSP90B1P14625 803 aaKnown RBP27.05■■□□□ 1.92
ATG4D-212ENST00000590096 BRPF1P55201 1214 aaPredicted RBP27.05■■□□□ 1.92
ATG4D-212ENST00000590096 RPGRQ92834 1020 aaKnown RBP27.05■■□□□ 1.92
ATG4D-212ENST00000590096 ARFGEF1Q9Y6D6 1849 aa27.04■■□□□ 1.92
ATG4D-212ENST00000590096 IRS4O14654 1257 aaPredicted RBP27.04■■□□□ 1.92
ATG4D-212ENST00000590096 CRY2Q49AN0 593 aa27.04■■□□□ 1.92
ATG4D-212ENST00000590096 KIF16BQ96L93 1317 aa27.04■■□□□ 1.92
ATG4D-212ENST00000590096 GOLGB1Q14789 3259 aaKnown RBP27.03■■□□□ 1.92
ATG4D-212ENST00000590096 BEND3Q5T5X7 828 aa27.03■■□□□ 1.92
ATG4D-212ENST00000590096 DDX60Q8IY21 1712 aaKnown RBP27.03■■□□□ 1.92
ATG4D-212ENST00000590096 CACNA1SQ13698 1873 aa27.02■■□□□ 1.92
ATG4D-212ENST00000590096 LAMB2P55268 1798 aa27.02■■□□□ 1.92
ATG4D-212ENST00000590096 GCKRQ14397 625 aa27.02■■□□□ 1.92
ATG4D-212ENST00000590096 C3orf67Q6ZVT6 689 aa27.02■■□□□ 1.92
ATG4D-212ENST00000590096 NOB1Q9ULX3 412 aaKnown RBP27.02■■□□□ 1.92
ATG4D-212ENST00000590096 ALDH1B1P30837 517 aa27.01■■□□□ 1.91
ATG4D-212ENST00000590096 RBM17Q96I25 401 aaKnown RBP27.01■■□□□ 1.91
ATG4D-212ENST00000590096 SRCIN1Q9C0H9 1055 aa27.01■■□□□ 1.91
ATG4D-212ENST00000590096 CDHR2Q9BYE9 1310 aa27■■□□□ 1.91
ATG4D-212ENST00000590096 JARID2Q92833 1246 aaPredicted RBP27■■□□□ 1.91
ATG4D-212ENST00000590096 CHD4Q14839 1912 aa27■■□□□ 1.91
ATG4D-212ENST00000590096 ALDH1L1O75891 902 aa26.99■■□□□ 1.91
ATG4D-212ENST00000590096 PRPF40BQ6NWY9 871 aaKnown RBP26.99■■□□□ 1.91
ATG4D-212ENST00000590096 API5Q9BZZ5 524 aaKnown RBP26.99■■□□□ 1.91
ATG4D-212ENST00000590096 BCAR3O75815 825 aa26.98■■□□□ 1.91
ATG4D-212ENST00000590096 HOXA10P31260 410 aaPredicted RBP26.98■■□□□ 1.91
ATG4D-212ENST00000590096 UBE3BQ7Z3V4 1068 aa26.98■■□□□ 1.91
ATG4D-212ENST00000590096 H7C1W4 665 aa26.97■■□□□ 1.91
ATG4D-212ENST00000590096 IPO8O15397 1037 aaKnown RBP26.97■■□□□ 1.91
ATG4D-212ENST00000590096 PDE8AO60658 829 aa26.97■■□□□ 1.91
ATG4D-212ENST00000590096 ZNF784Q8NCA9 323 aaPredicted RBP26.97■■□□□ 1.91
ATG4D-212ENST00000590096 SLX4Q8IY92 1834 aa26.97■■□□□ 1.91
ATG4D-212ENST00000590096 ARHGAP27Q6ZUM4 889 aa26.96■■□□□ 1.91
ATG4D-212ENST00000590096 DDX46Q7L014 1031 aaKnown RBP26.96■■□□□ 1.91
ATG4D-212ENST00000590096 ARHGAP45Q92619 1136 aa26.96■■□□□ 1.91
ATG4D-212ENST00000590096 CRAMP1Q96RY5 1269 aa26.96■■□□□ 1.91
ATG4D-212ENST00000590096 ZNF219Q9P2Y4 722 aaPredicted RBP26.96■■□□□ 1.91
ATG4D-212ENST00000590096 SF3B3Q15393 1217 aaKnown RBP26.95■■□□□ 1.9
ATG4D-212ENST00000590096 FRAT1Q92837 279 aaPredicted RBP26.95■■□□□ 1.9
ATG4D-212ENST00000590096 C9orf78Q9NZ63 289 aaPredicted RBP26.95■■□□□ 1.9
ATG4D-212ENST00000590096 C21orf2O43822 256 aa26.94■■□□□ 1.9
ATG4D-212ENST00000590096 SOGA3Q5TF21 947 aa26.94■■□□□ 1.9
ATG4D-212ENST00000590096 ABCC4O15439 1325 aa26.92■■□□□ 1.9
ATG4D-212ENST00000590096 GRM8O00222 908 aa26.92■■□□□ 1.9
ATG4D-212ENST00000590096 CCDC152Q4G0S7 254 aa26.92■■□□□ 1.9
ATG4D-212ENST00000590096 MYH3P11055 1940 aa26.92■■□□□ 1.9
ATG4D-212ENST00000590096 CCT4P50991 539 aaKnown RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms