RNA–Protein interactions for RNA: ENST00000589958.1

AC006116.2-201, humanhuman

BASIC

Gene AC006116.2, Length 988 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006116.2-201ENST00000589958 COL13A1Q5TAT6 717 aaPredicted RBP17.04■□□□□ 0.32
AC006116.2-201ENST00000589958 RPGRQ92834 1020 aaKnown RBP17.04■□□□□ 0.32
AC006116.2-201ENST00000589958 L3MBTL3Q96JM7 780 aaPredicted RBP17.04■□□□□ 0.32
AC006116.2-201ENST00000589958 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
AC006116.2-201ENST00000589958 COL4A5P29400 1685 aa17.04■□□□□ 0.32
AC006116.2-201ENST00000589958 ERBB4Q15303 1308 aa17.03■□□□□ 0.32
AC006116.2-201ENST00000589958 EAPPQ56P03 285 aaPredicted RBP17.03■□□□□ 0.32
AC006116.2-201ENST00000589958 RNF123Q5XPI4 1314 aa17.02■□□□□ 0.32
AC006116.2-201ENST00000589958 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
AC006116.2-201ENST00000589958 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.32
AC006116.2-201ENST00000589958 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.32
AC006116.2-201ENST00000589958 AIMP1Q12904 312 aaKnown RBP17.02■□□□□ 0.32
AC006116.2-201ENST00000589958 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
AC006116.2-201ENST00000589958 LAS1LQ9Y4W2 734 aaKnown RBP17.02■□□□□ 0.32
AC006116.2-201ENST00000589958 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
AC006116.2-201ENST00000589958 FZD9O00144 591 aa17.01■□□□□ 0.31
AC006116.2-201ENST00000589958 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
AC006116.2-201ENST00000589958 MKRN1Q9UHC7 482 aaKnown RBP17.01■□□□□ 0.31
AC006116.2-201ENST00000589958 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
AC006116.2-201ENST00000589958 ANKRD36CQ5JPF3 1778 aa17.01■□□□□ 0.31
AC006116.2-201ENST00000589958 LAMB2P55268 1798 aa17■□□□□ 0.31
AC006116.2-201ENST00000589958 PPEF1O14829 653 aaPredicted RBP17■□□□□ 0.31
AC006116.2-201ENST00000589958 HSPA1AP0DMV8 641 aaKnown RBP17■□□□□ 0.31
AC006116.2-201ENST00000589958 HSPA1BP0DMV9 641 aaKnown RBP17■□□□□ 0.31
AC006116.2-201ENST00000589958 RIC1Q4ADV7 1423 aa17■□□□□ 0.31
AC006116.2-201ENST00000589958 COPS6Q7L5N1 327 aa17■□□□□ 0.31
AC006116.2-201ENST00000589958 PPP1R42Q7Z4L9 355 aa17■□□□□ 0.31
AC006116.2-201ENST00000589958 LDHDQ86WU2 507 aa17■□□□□ 0.31
AC006116.2-201ENST00000589958 XAGE3Q8WTP9 111 aa17■□□□□ 0.31
AC006116.2-201ENST00000589958 PSMD1Q99460 953 aa17■□□□□ 0.31
AC006116.2-201ENST00000589958 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
AC006116.2-201ENST00000589958 TAF1P21675 1872 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 EPHX2P34913 555 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 PARP10Q53GL7 1025 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 JDP2Q8WYK2 163 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 CRAMP1Q96RY5 1269 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 GJA3Q9Y6H8 435 aa16.99■□□□□ 0.31
AC006116.2-201ENST00000589958 PASKQ96RG2 1323 aa16.98■□□□□ 0.31
AC006116.2-201ENST00000589958 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
AC006116.2-201ENST00000589958 NLRP3Q96P20 1036 aa16.98■□□□□ 0.31
AC006116.2-201ENST00000589958 LTBP1Q14766 1721 aa16.98■□□□□ 0.31
AC006116.2-201ENST00000589958 ADAMTSL1Q8N6G6 1762 aa16.97■□□□□ 0.31
AC006116.2-201ENST00000589958 ITGBL1O95965 494 aaPredicted RBP16.97■□□□□ 0.31
AC006116.2-201ENST00000589958 HCLS1P14317 486 aaPredicted RBP16.97■□□□□ 0.31
AC006116.2-201ENST00000589958 MAP1SQ66K74 1059 aaPredicted RBP16.97■□□□□ 0.31
AC006116.2-201ENST00000589958 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
AC006116.2-201ENST00000589958 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
AC006116.2-201ENST00000589958 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
AC006116.2-201ENST00000589958 ABCC4O15439 1325 aa16.96■□□□□ 0.31
AC006116.2-201ENST00000589958 CHL1O00533 1208 aa16.96■□□□□ 0.31
AC006116.2-201ENST00000589958 EIF6P56537 245 aaKnown RBP16.96■□□□□ 0.31
AC006116.2-201ENST00000589958 WDR43Q15061 677 aaKnown RBP eCLIP16.96■□□□□ 0.31
AC006116.2-201ENST00000589958 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
AC006116.2-201ENST00000589958 NLRP10Q86W26 655 aa16.96■□□□□ 0.31
AC006116.2-201ENST00000589958 GPC2Q8N158 579 aa16.96■□□□□ 0.31
AC006116.2-201ENST00000589958 CHPF2Q9P2E5 772 aa16.96■□□□□ 0.31
AC006116.2-201ENST00000589958 DDX21Q9NR30 783 aaKnown RBP eCLIP16.95■□□□□ 0.3
AC006116.2-201ENST00000589958 PPIP5K2O43314 1243 aa16.94■□□□□ 0.3
AC006116.2-201ENST00000589958 TCIRG1Q13488 830 aa16.94■□□□□ 0.3
AC006116.2-201ENST00000589958 AOC3Q16853 763 aa16.94■□□□□ 0.3
AC006116.2-201ENST00000589958 HSP90AB3PQ58FF7 597 aa16.94■□□□□ 0.3
AC006116.2-201ENST00000589958 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
AC006116.2-201ENST00000589958 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
AC006116.2-201ENST00000589958 CAPN15O75808 1086 aa16.93■□□□□ 0.3
AC006116.2-201ENST00000589958 EPS15P42566 896 aa16.93■□□□□ 0.3
AC006116.2-201ENST00000589958 CNTROBQ8N137 903 aa16.93■□□□□ 0.3
AC006116.2-201ENST00000589958 CNTNAP1P78357 1384 aa16.92■□□□□ 0.3
AC006116.2-201ENST00000589958 TMEM88BA6NKF7 163 aa16.92■□□□□ 0.3
AC006116.2-201ENST00000589958 SCNN1DP51172 638 aa16.92■□□□□ 0.3
AC006116.2-201ENST00000589958 FMR1Q06787 632 aaKnown RBP eCLIP16.92■□□□□ 0.3
AC006116.2-201ENST00000589958 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
AC006116.2-201ENST00000589958 PNMA8AQ86V59 439 aaPredicted RBP16.92■□□□□ 0.3
AC006116.2-201ENST00000589958 NIM1KQ8IY84 436 aa16.92■□□□□ 0.3
AC006116.2-201ENST00000589958 DDX60Q8IY21 1712 aaKnown RBP16.91■□□□□ 0.3
AC006116.2-201ENST00000589958 LMOD1P29536 600 aaPredicted RBP16.91■□□□□ 0.3
AC006116.2-201ENST00000589958 VEGFBP49765 207 aa16.91■□□□□ 0.3
AC006116.2-201ENST00000589958 GRIPAP1Q4V328 841 aa16.91■□□□□ 0.3
AC006116.2-201ENST00000589958 TNS4Q8IZW8 715 aa16.91■□□□□ 0.3
AC006116.2-201ENST00000589958 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
AC006116.2-201ENST00000589958 PRKRIP1Q9H875 184 aaPredicted RBP16.91■□□□□ 0.3
AC006116.2-201ENST00000589958 SH3TC1Q8TE82 1336 aa16.91■□□□□ 0.3
AC006116.2-201ENST00000589958 ATP5J2-PTCD1G3V325 749 aa16.9■□□□□ 0.3
AC006116.2-201ENST00000589958 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
AC006116.2-201ENST00000589958 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
AC006116.2-201ENST00000589958 RTL5Q5HYW3 569 aaPredicted RBP16.89■□□□□ 0.29
AC006116.2-201ENST00000589958 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.29
AC006116.2-201ENST00000589958 DPP8Q6V1X1 898 aaPredicted RBP16.89■□□□□ 0.29
AC006116.2-201ENST00000589958 ANKRD13DQ6ZTN6 518 aa16.89■□□□□ 0.29
AC006116.2-201ENST00000589958 SP8Q8IXZ3 490 aa16.89■□□□□ 0.29
AC006116.2-201ENST00000589958 CFAP44Q96MT7 982 aa16.89■□□□□ 0.29
AC006116.2-201ENST00000589958 COL4A1P02462 1669 aa16.88■□□□□ 0.29
AC006116.2-201ENST00000589958 APAF1O14727 1248 aa16.88■□□□□ 0.29
AC006116.2-201ENST00000589958 BBOX1O75936 387 aa16.88■□□□□ 0.29
AC006116.2-201ENST00000589958 CXCL9Q07325 125 aa16.88■□□□□ 0.29
AC006116.2-201ENST00000589958 GRAPQ13588 217 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms