RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 BABAM1Q9NWV8 329 aa21.38■■□□□ 1.01
MBD3-206ENST00000589901 NUP98P52948 1817 aa21.38■■□□□ 1.01
MBD3-206ENST00000589901 SNED1Q8TER0 1413 aa21.38■■□□□ 1.01
MBD3-206ENST00000589901 MYBBP1AQ9BQG0 1328 aaKnown RBP21.37■■□□□ 1.01
MBD3-206ENST00000589901 HOXA10P31260 410 aaPredicted RBP21.37■■□□□ 1.01
MBD3-206ENST00000589901 LMOD3Q0VAK6 560 aa21.37■■□□□ 1.01
MBD3-206ENST00000589901 NECTIN2Q92692 538 aa21.37■■□□□ 1.01
MBD3-206ENST00000589901 RIC1Q4ADV7 1423 aa21.37■■□□□ 1.01
MBD3-206ENST00000589901 FZD9O00144 591 aa21.36■■□□□ 1.01
MBD3-206ENST00000589901 PSMD1Q99460 953 aa21.36■■□□□ 1.01
MBD3-206ENST00000589901 KRT24Q2M2I5 525 aa21.35■■□□□ 1.01
MBD3-206ENST00000589901 PARP10Q53GL7 1025 aa21.35■■□□□ 1.01
MBD3-206ENST00000589901 PPP1R42Q7Z4L9 355 aa21.35■■□□□ 1.01
MBD3-206ENST00000589901 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
MBD3-206ENST00000589901 COL13A1Q5TAT6 717 aaPredicted RBP21.34■■□□□ 1.01
MBD3-206ENST00000589901 CC2D2BQ6DHV5 1058 aa21.34■■□□□ 1.01
MBD3-206ENST00000589901 COPS6Q7L5N1 327 aa21.34■■□□□ 1.01
MBD3-206ENST00000589901 LDHDQ86WU2 507 aa21.34■■□□□ 1.01
MBD3-206ENST00000589901 RBM17Q96I25 401 aaKnown RBP21.34■■□□□ 1.01
MBD3-206ENST00000589901 CRAMP1Q96RY5 1269 aa21.34■■□□□ 1.01
MBD3-206ENST00000589901 PPEF1O14829 653 aaPredicted RBP21.33■■□□□ 1.01
MBD3-206ENST00000589901 AIMP1Q12904 312 aaKnown RBP21.33■■□□□ 1.01
MBD3-206ENST00000589901 EAPPQ56P03 285 aaPredicted RBP21.33■■□□□ 1.01
MBD3-206ENST00000589901 UTP14AQ9BVJ6 771 aaKnown RBP21.33■■□□□ 1.01
MBD3-206ENST00000589901 HACL1Q9UJ83 578 aa21.33■■□□□ 1.01
MBD3-206ENST00000589901 TRIM35Q9UPQ4 493 aa21.33■■□□□ 1.01
MBD3-206ENST00000589901 RNF123Q5XPI4 1314 aa21.32■■□□□ 1
MBD3-206ENST00000589901 CHL1O00533 1208 aa21.32■■□□□ 1
MBD3-206ENST00000589901 XAGE3Q8WTP9 111 aa21.32■■□□□ 1
MBD3-206ENST00000589901 JDP2Q8WYK2 163 aa21.32■■□□□ 1
MBD3-206ENST00000589901 RUNDC1Q96C34 613 aa21.32■■□□□ 1
MBD3-206ENST00000589901 NLRP3Q96P20 1036 aa21.32■■□□□ 1
MBD3-206ENST00000589901 CREBZFQ9NS37 354 aa21.32■■□□□ 1
MBD3-206ENST00000589901 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
MBD3-206ENST00000589901 COL4A5P29400 1685 aa21.31■■□□□ 1
MBD3-206ENST00000589901 EPHX2P34913 555 aa21.31■■□□□ 1
MBD3-206ENST00000589901 WDR43Q15061 677 aaKnown RBP eCLIP21.31■■□□□ 1
MBD3-206ENST00000589901 GPC2Q8N158 579 aa21.31■■□□□ 1
MBD3-206ENST00000589901 ADAMTS8Q9UP79 889 aa21.31■■□□□ 1
MBD3-206ENST00000589901 PASKQ96RG2 1323 aa21.3■■□□□ 1
MBD3-206ENST00000589901 SLC10A5Q5PT55 438 aa21.3■■□□□ 1
MBD3-206ENST00000589901 MKRN1Q9UHC7 482 aaKnown RBP21.3■■□□□ 1
MBD3-206ENST00000589901 HSPA1AP0DMV8 641 aaKnown RBP21.29■■□□□ 1
MBD3-206ENST00000589901 HSPA1BP0DMV9 641 aaKnown RBP21.29■■□□□ 1
MBD3-206ENST00000589901 LARGE2Q8N3Y3 721 aa21.29■■□□□ 1
MBD3-206ENST00000589901 DDX21Q9NR30 783 aaKnown RBP eCLIP21.29■■□□□ 1
MBD3-206ENST00000589901 CLEC11AQ9Y240 323 aa21.29■■□□□ 1
MBD3-206ENST00000589901 GJA3Q9Y6H8 435 aa21.29■■□□□ 1
MBD3-206ENST00000589901 SCN4AP35499 1836 aa21.29■■□□□ 1
MBD3-206ENST00000589901 ITGBL1O95965 494 aaPredicted RBP21.28■■□□□ 1
MBD3-206ENST00000589901 GRIPAP1Q4V328 841 aa21.28■■□□□ 1
MBD3-206ENST00000589901 NLRP10Q86W26 655 aa21.28■■□□□ 1
MBD3-206ENST00000589901 HCLS1P14317 486 aaPredicted RBP21.27■■□□□ 1
MBD3-206ENST00000589901 EIF6P56537 245 aaKnown RBP21.27■■□□□ 1
MBD3-206ENST00000589901 TCIRG1Q13488 830 aa21.27■■□□□ 1
MBD3-206ENST00000589901 HSP90AB3PQ58FF7 597 aa21.27■■□□□ 1
MBD3-206ENST00000589901 ZNF428Q96B54 188 aa21.27■■□□□ 1
MBD3-206ENST00000589901 CHPF2Q9P2E5 772 aa21.27■■□□□ 1
MBD3-206ENST00000589901 ABCC4O15439 1325 aa21.27■□□□□ 0.99
MBD3-206ENST00000589901 MAP1SQ66K74 1059 aaPredicted RBP21.26■□□□□ 0.99
MBD3-206ENST00000589901 PNMA8AQ86V59 439 aaPredicted RBP21.26■□□□□ 0.99
MBD3-206ENST00000589901 ATP6V0A2Q9Y487 856 aa21.26■□□□□ 0.99
MBD3-206ENST00000589901 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
MBD3-206ENST00000589901 TRMT112Q9UI30 125 aaKnown RBP21.25■□□□□ 0.99
MBD3-206ENST00000589901 PPIP5K2O43314 1243 aa21.24■□□□□ 0.99
MBD3-206ENST00000589901 AOC3Q16853 763 aa21.24■□□□□ 0.99
MBD3-206ENST00000589901 CNTROBQ8N137 903 aa21.24■□□□□ 0.99
MBD3-206ENST00000589901 TMX4Q9H1E5 349 aaPredicted RBP21.24■□□□□ 0.99
MBD3-206ENST00000589901 TMEM88BA6NKF7 163 aa21.23■□□□□ 0.99
MBD3-206ENST00000589901 SCNN1DP51172 638 aa21.23■□□□□ 0.99
MBD3-206ENST00000589901 NIM1KQ8IY84 436 aa21.23■□□□□ 0.99
MBD3-206ENST00000589901 PRKRIP1Q9H875 184 aaPredicted RBP21.23■□□□□ 0.99
MBD3-206ENST00000589901 SH3TC1Q8TE82 1336 aa21.23■□□□□ 0.99
MBD3-206ENST00000589901 ADAMTSL1Q8N6G6 1762 aa21.23■□□□□ 0.99
MBD3-206ENST00000589901 CNTNAP1P78357 1384 aa21.23■□□□□ 0.99
MBD3-206ENST00000589901 EPS15P42566 896 aa21.22■□□□□ 0.99
MBD3-206ENST00000589901 CFAP44Q96MT7 982 aa21.22■□□□□ 0.99
MBD3-206ENST00000589901 BBOX1O75936 387 aa21.21■□□□□ 0.99
MBD3-206ENST00000589901 HOXB7P09629 217 aa21.21■□□□□ 0.99
MBD3-206ENST00000589901 LMOD1P29536 600 aaPredicted RBP21.21■□□□□ 0.99
MBD3-206ENST00000589901 PLBD2Q8NHP8 589 aa21.21■□□□□ 0.99
MBD3-206ENST00000589901 DBF4Q9UBU7 674 aaPredicted RBP21.21■□□□□ 0.99
MBD3-206ENST00000589901 DUSP27Q5VZP5 1158 aa21.2■□□□□ 0.98
MBD3-206ENST00000589901 DPP8Q6V1X1 898 aaPredicted RBP21.2■□□□□ 0.98
MBD3-206ENST00000589901 ANKRD13DQ6ZTN6 518 aa21.2■□□□□ 0.98
MBD3-206ENST00000589901 DDX46Q7L014 1031 aaKnown RBP21.2■□□□□ 0.98
MBD3-206ENST00000589901 SP8Q8IXZ3 490 aa21.2■□□□□ 0.98
MBD3-206ENST00000589901 TNS4Q8IZW8 715 aa21.2■□□□□ 0.98
MBD3-206ENST00000589901 RTFDC1Q9BY42 306 aaPredicted RBP21.2■□□□□ 0.98
MBD3-206ENST00000589901 MBIPQ9NS73 344 aa21.2■□□□□ 0.98
MBD3-206ENST00000589901 LTBP1Q14766 1721 aa21.2■□□□□ 0.98
MBD3-206ENST00000589901 ATP5J2-PTCD1G3V325 749 aa21.19■□□□□ 0.98
MBD3-206ENST00000589901 VEGFBP49765 207 aa21.19■□□□□ 0.98
MBD3-206ENST00000589901 GRAPQ13588 217 aa21.19■□□□□ 0.98
MBD3-206ENST00000589901 GRAPLQ8TC17 118 aaPredicted RBP21.19■□□□□ 0.98
MBD3-206ENST00000589901 VPS33BQ9H267 617 aa21.19■□□□□ 0.98
MBD3-206ENST00000589901 ANKRD36CQ5JPF3 1778 aa21.18■□□□□ 0.98
MBD3-206ENST00000589901 APAF1O14727 1248 aa21.18■□□□□ 0.98
MBD3-206ENST00000589901 CXCL9Q07325 125 aa21.18■□□□□ 0.98
MBD3-206ENST00000589901 MPNDQ8N594 471 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms