RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 GPR162Q16538 588 aa13.5□□□□□ -0.25
SDF2-208ENST00000589788 TMEM92Q6UXU6 159 aa13.5□□□□□ -0.25
SDF2-208ENST00000589788 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
SDF2-208ENST00000589788 DPYSL4O14531 572 aa13.49□□□□□ -0.25
SDF2-208ENST00000589788 DZIP3Q86Y13 1208 aaKnown RBP13.49□□□□□ -0.25
SDF2-208ENST00000589788 SCN7AQ01118 1682 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 NBPF26B4DH59 902 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 TM4SF1P30408 202 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 DDR1Q08345 913 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 NFIXQ14938 502 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
SDF2-208ENST00000589788 BICDL1Q6ZP65 573 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 NBPF15Q8N660 670 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 BCL2L12Q9HB09 334 aa13.48□□□□□ -0.25
SDF2-208ENST00000589788 SENP3-EIF4A1A0A087X0R7 540 aa13.47□□□□□ -0.25
SDF2-208ENST00000589788 POLRMTO00411 1230 aaKnown RBP13.47□□□□□ -0.25
SDF2-208ENST00000589788 EIF2S2P20042 333 aaKnown RBP13.47□□□□□ -0.25
SDF2-208ENST00000589788 MLLT3P42568 568 aaPredicted RBP13.47□□□□□ -0.25
SDF2-208ENST00000589788 GNAI1P63096 354 aa13.47□□□□□ -0.25
SDF2-208ENST00000589788 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
SDF2-208ENST00000589788 DCBLD2Q96PD2 775 aa13.47□□□□□ -0.25
SDF2-208ENST00000589788 C10orf71Q711Q0 1435 aa13.47□□□□□ -0.25
SDF2-208ENST00000589788 KIF13BQ9NQT8 1826 aa13.47□□□□□ -0.25
SDF2-208ENST00000589788 BCORQ6W2J9 1755 aa13.46□□□□□ -0.25
SDF2-208ENST00000589788 ERBB4Q15303 1308 aa13.46□□□□□ -0.25
SDF2-208ENST00000589788 CAMTA2O94983 1202 aa13.46□□□□□ -0.25
SDF2-208ENST00000589788 PDIA6Q15084 440 aa13.46□□□□□ -0.25
SDF2-208ENST00000589788 NGEFQ8N5V2 710 aa13.46□□□□□ -0.25
SDF2-208ENST00000589788 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
SDF2-208ENST00000589788 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
SDF2-208ENST00000589788 POTEIP0CG38 1075 aa13.45□□□□□ -0.26
SDF2-208ENST00000589788 MYL6BP14649 208 aa13.45□□□□□ -0.26
SDF2-208ENST00000589788 TGFB2P61812 414 aa13.45□□□□□ -0.26
SDF2-208ENST00000589788 TBC1D9BQ66K14 1250 aa13.45□□□□□ -0.26
SDF2-208ENST00000589788 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
SDF2-208ENST00000589788 MBIPQ9NS73 344 aa13.45□□□□□ -0.26
SDF2-208ENST00000589788 AFDNP55196 1824 aaKnown RBP13.45□□□□□ -0.26
SDF2-208ENST00000589788 NPHP1O15259 732 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 SERPINB2P05120 415 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 CCDC27Q2M243 656 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 SLC39A7Q92504 469 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 SETDB2Q96T68 719 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
SDF2-208ENST00000589788 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
SDF2-208ENST00000589788 PXDNLA1KZ92 1463 aa13.43□□□□□ -0.26
SDF2-208ENST00000589788 G3V3G9 751 aa13.43□□□□□ -0.26
SDF2-208ENST00000589788 HOXB7P09629 217 aa13.43□□□□□ -0.26
SDF2-208ENST00000589788 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
SDF2-208ENST00000589788 WWC1Q8IX03 1113 aa13.43□□□□□ -0.26
SDF2-208ENST00000589788 WWC3Q9ULE0 1092 aa13.43□□□□□ -0.26
SDF2-208ENST00000589788 SALL2Q9Y467 1007 aaPredicted RBP13.43□□□□□ -0.26
SDF2-208ENST00000589788 A0A0G2JLW4 131 aa13.42□□□□□ -0.26
SDF2-208ENST00000589788 GRIN3BO60391 1043 aa13.42□□□□□ -0.26
SDF2-208ENST00000589788 SEC24BO95487 1268 aa13.42□□□□□ -0.26
SDF2-208ENST00000589788 HDGFL1Q5TGJ6 251 aa13.42□□□□□ -0.26
SDF2-208ENST00000589788 DUSP27Q5VZP5 1158 aa13.42□□□□□ -0.26
SDF2-208ENST00000589788 SMYD5Q6GMV2 418 aa13.42□□□□□ -0.26
SDF2-208ENST00000589788 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
SDF2-208ENST00000589788 ERVV-1B6SEH8 477 aa13.41□□□□□ -0.26
SDF2-208ENST00000589788 DPEP1P16444 411 aa13.41□□□□□ -0.26
SDF2-208ENST00000589788 YBX3P16989 372 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■□□□□ 8.7
SDF2-208ENST00000589788 KIAA1551Q9HCM1 1747 aa13.41□□□□□ -0.26
SDF2-208ENST00000589788 MAP3K15Q6ZN16 1313 aa13.41□□□□□ -0.26
SDF2-208ENST00000589788 ANXA1P04083 346 aa13.4□□□□□ -0.26
SDF2-208ENST00000589788 PROSER3Q2NL68 480 aa13.4□□□□□ -0.26
SDF2-208ENST00000589788 TTLL7Q6ZT98 887 aa13.4□□□□□ -0.26
SDF2-208ENST00000589788 NBPF5PQ86XG9 351 aaPredicted RBP13.4□□□□□ -0.26
SDF2-208ENST00000589788 CNBD1Q8NA66 436 aa13.4□□□□□ -0.26
SDF2-208ENST00000589788 ZBTB3Q9H5J0 574 aa13.4□□□□□ -0.26
SDF2-208ENST00000589788 DDX21Q9NR30 783 aaKnown RBP eCLIP13.4□□□□□ -0.26
SDF2-208ENST00000589788 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
SDF2-208ENST00000589788 CHD4Q14839 1912 aa13.4□□□□□ -0.26
SDF2-208ENST00000589788 IL16Q14005 1332 aa13.4□□□□□ -0.26
SDF2-208ENST00000589788 NUP98P52948 1817 aa13.4□□□□□ -0.26
SDF2-208ENST00000589788 SPDYE16A6NNV3 312 aaPredicted RBP13.39□□□□□ -0.27
SDF2-208ENST00000589788 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 ELL2O00472 640 aaPredicted RBP13.39□□□□□ -0.27
SDF2-208ENST00000589788 YY1P25490 414 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 ST5P78524 1137 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 HLFQ16534 295 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 TSR2Q969E8 191 aaKnown RBP13.39□□□□□ -0.27
SDF2-208ENST00000589788 CHPF2Q9P2E5 772 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 DBF4Q9UBU7 674 aaPredicted RBP13.39□□□□□ -0.27
SDF2-208ENST00000589788 BCS1LQ9Y276 419 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 C7P10643 843 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 CHRNA5P30532 468 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
SDF2-208ENST00000589788 RBM26Q5T8P6 1007 aaKnown RBP13.39□□□□□ -0.27
SDF2-208ENST00000589788 PRR5LQ6MZQ0 368 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 WDR63Q8IWG1 891 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 CHMP4AQ9BY43 222 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 PIM2Q9P1W9 311 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
SDF2-208ENST00000589788 FAM177BA6PVY3 158 aa13.38□□□□□ -0.27
SDF2-208ENST00000589788 H0YIN7 160 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms