RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 RGS3P49796 1198 aa12.78□□□□□ -0.36
APOC1-205ENST00000589781 DNAAF4Q8WXU2 420 aa12.78□□□□□ -0.36
APOC1-205ENST00000589781 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
APOC1-205ENST00000589781 PDZRN3Q9UPQ7 1066 aa12.78□□□□□ -0.36
APOC1-205ENST00000589781 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
APOC1-205ENST00000589781 UTRNP46939 3433 aa12.78□□□□□ -0.36
APOC1-205ENST00000589781 SCN7AQ01118 1682 aa12.77□□□□□ -0.36
APOC1-205ENST00000589781 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.37
APOC1-205ENST00000589781 SERPINB2P05120 415 aa12.77□□□□□ -0.37
APOC1-205ENST00000589781 AIMP1Q12904 312 aaKnown RBP12.77□□□□□ -0.37
APOC1-205ENST00000589781 BICDL1Q6ZP65 573 aa12.77□□□□□ -0.37
APOC1-205ENST00000589781 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
APOC1-205ENST00000589781 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.37
APOC1-205ENST00000589781 XAGE3Q8WTP9 111 aa12.77□□□□□ -0.37
APOC1-205ENST00000589781 MAP3K2Q9Y2U5 619 aa12.77□□□□□ -0.37
APOC1-205ENST00000589781 GOLGB1Q14789 3259 aaKnown RBP12.76□□□□□ -0.37
APOC1-205ENST00000589781 TGFB2P61812 414 aa12.76□□□□□ -0.37
APOC1-205ENST00000589781 HLFQ16534 295 aa12.76□□□□□ -0.37
APOC1-205ENST00000589781 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
APOC1-205ENST00000589781 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
APOC1-205ENST00000589781 SIRT2Q8IXJ6 389 aa12.76□□□□□ -0.37
APOC1-205ENST00000589781 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
APOC1-205ENST00000589781 ZNF330Q9Y3S2 320 aaPredicted RBP12.76□□□□□ -0.37
APOC1-205ENST00000589781 A0A087WZG4 1122 aa12.75□□□□□ -0.37
APOC1-205ENST00000589781 DDX58O95786 925 aaKnown RBP12.75□□□□□ -0.37
APOC1-205ENST00000589781 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
APOC1-205ENST00000589781 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
APOC1-205ENST00000589781 CEP85Q6P2H3 762 aa12.75□□□□□ -0.37
APOC1-205ENST00000589781 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
APOC1-205ENST00000589781 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
APOC1-205ENST00000589781 BCORQ6W2J9 1755 aa12.74□□□□□ -0.37
APOC1-205ENST00000589781 GNAI3P08754 354 aa12.74□□□□□ -0.37
APOC1-205ENST00000589781 PRR5LQ6MZQ0 368 aa12.74□□□□□ -0.37
APOC1-205ENST00000589781 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
APOC1-205ENST00000589781 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
APOC1-205ENST00000589781 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
APOC1-205ENST00000589781 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
APOC1-205ENST00000589781 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
APOC1-205ENST00000589781 GNAI2P04899 355 aa12.73□□□□□ -0.37
APOC1-205ENST00000589781 ZNF784Q8NCA9 323 aaPredicted RBP12.73□□□□□ -0.37
APOC1-205ENST00000589781 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
APOC1-205ENST00000589781 ANKRD31Q8N7Z5 1873 aa12.72□□□□□ -0.37
APOC1-205ENST00000589781 GRIN3BO60391 1043 aa12.72□□□□□ -0.37
APOC1-205ENST00000589781 UBTFL1P0CB47 393 aaPredicted RBP12.72□□□□□ -0.37
APOC1-205ENST00000589781 PDE4AP27815 886 aa12.72□□□□□ -0.37
APOC1-205ENST00000589781 RIC3Q7Z5B4 369 aa12.72□□□□□ -0.37
APOC1-205ENST00000589781 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
APOC1-205ENST00000589781 ALDH1L1O75891 902 aa12.71□□□□□ -0.37
APOC1-205ENST00000589781 PRELPP51888 382 aa12.71□□□□□ -0.37
APOC1-205ENST00000589781 CWF19L2Q2TBE0 894 aaKnown RBP12.71□□□□□ -0.37
APOC1-205ENST00000589781 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
APOC1-205ENST00000589781 MYD88Q99836 296 aa12.71□□□□□ -0.37
APOC1-205ENST00000589781 BCS1LQ9Y276 419 aa12.71□□□□□ -0.37
APOC1-205ENST00000589781 IGKV5-2P06315 115 aa12.7□□□□□ -0.38
APOC1-205ENST00000589781 NUCB1Q02818 461 aa12.7□□□□□ -0.38
APOC1-205ENST00000589781 CLEC4GQ6UXB4 293 aa12.7□□□□□ -0.38
APOC1-205ENST00000589781 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
APOC1-205ENST00000589781 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
APOC1-205ENST00000589781 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
APOC1-205ENST00000589781 NBPF7P0C2Y1 421 aaPredicted RBP12.69□□□□□ -0.38
APOC1-205ENST00000589781 ANKRD13DQ6ZTN6 518 aa12.69□□□□□ -0.38
APOC1-205ENST00000589781 LINS1Q8NG48 757 aa12.69□□□□□ -0.38
APOC1-205ENST00000589781 LNPKQ9C0E8 428 aa12.69□□□□□ -0.38
APOC1-205ENST00000589781 COL11A2P13942 1736 aaPredicted RBP12.68□□□□□ -0.38
APOC1-205ENST00000589781 MAP3K15Q6ZN16 1313 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 NUP98P52948 1817 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 PNMA6EA0A0J9YXQ4 647 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 NEURL1BA8MQ27 555 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 RGL2O15211 777 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 HMMRO75330 724 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 SETDB2Q96T68 719 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 CHD4Q14839 1912 aa12.68□□□□□ -0.38
APOC1-205ENST00000589781 KLRG2A4D1S0 409 aaPredicted RBP12.67□□□□□ -0.38
APOC1-205ENST00000589781 ERVV-1B6SEH8 477 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 ANKRD45Q5TZF3 282 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 CHD1LQ86WJ1 897 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 C2CD5Q86YS7 1000 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 ZNF34Q8IZ26 560 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 BRIP1Q9BX63 1249 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 C9orf78Q9NZ63 289 aaPredicted RBP12.67□□□□□ -0.38
APOC1-205ENST00000589781 NIP7Q9Y221 180 aaKnown RBP eCLIP12.67□□□□□ -0.38
APOC1-205ENST00000589781 ABCC12Q96J65 1359 aa12.67□□□□□ -0.38
APOC1-205ENST00000589781 FAM177BA6PVY3 158 aa12.66□□□□□ -0.38
APOC1-205ENST00000589781 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
APOC1-205ENST00000589781 APBB1O00213 710 aa12.66□□□□□ -0.38
APOC1-205ENST00000589781 GRM8O00222 908 aa12.66□□□□□ -0.38
APOC1-205ENST00000589781 ATP8B2P98198 1209 aa12.66□□□□□ -0.38
APOC1-205ENST00000589781 DALRD3Q5D0E6 543 aaKnown RBP12.66□□□□□ -0.38
APOC1-205ENST00000589781 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
APOC1-205ENST00000589781 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
APOC1-205ENST00000589781 SUCLG2Q96I99 432 aa12.66□□□□□ -0.38
APOC1-205ENST00000589781 RBM19Q9Y4C8 960 aaKnown RBP12.66□□□□□ -0.38
APOC1-205ENST00000589781 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
APOC1-205ENST00000589781 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms