RNA–Protein interactions for RNA: ENST00000589381.5

ERCC1-210, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-210ENST00000589381 H0YIN7 160 aa23.49■■□□□ 1.35
ERCC1-210ENST00000589381 NTSR2O95665 410 aa23.49■■□□□ 1.35
ERCC1-210ENST00000589381 CHRNA5P30532 468 aa23.49■■□□□ 1.35
ERCC1-210ENST00000589381 GPR162Q16538 588 aa23.49■■□□□ 1.35
ERCC1-210ENST00000589381 C2CD5Q86YS7 1000 aa23.49■■□□□ 1.35
ERCC1-210ENST00000589381 SMC4Q9NTJ3 1288 aa23.49■■□□□ 1.35
ERCC1-210ENST00000589381 TRMT112Q9UI30 125 aaKnown RBP23.49■■□□□ 1.35
ERCC1-210ENST00000589381 COL11A2P13942 1736 aaPredicted RBP23.49■■□□□ 1.35
ERCC1-210ENST00000589381 RNF123Q5XPI4 1314 aa23.49■■□□□ 1.35
ERCC1-210ENST00000589381 TRIM28Q13263 835 aaKnown RBP23.48■■□□□ 1.35
ERCC1-210ENST00000589381 ERFEQ4G0M1 354 aa23.48■■□□□ 1.35
ERCC1-210ENST00000589381 MRPL50Q8N5N7 158 aaKnown RBP23.48■■□□□ 1.35
ERCC1-210ENST00000589381 BCL2L13Q9BXK5 485 aa23.48■■□□□ 1.35
ERCC1-210ENST00000589381 WWC3Q9ULE0 1092 aa23.48■■□□□ 1.35
ERCC1-210ENST00000589381 ARFGEF1Q9Y6D6 1849 aa23.47■■□□□ 1.35
ERCC1-210ENST00000589381 DNAAF4Q8WXU2 420 aa23.47■■□□□ 1.35
ERCC1-210ENST00000589381 CCDC191Q8NCU4 936 aa23.46■■□□□ 1.35
ERCC1-210ENST00000589381 ABCC12Q96J65 1359 aa23.46■■□□□ 1.35
ERCC1-210ENST00000589381 TNRC6CQ9HCJ0 1690 aaKnown RBP23.46■■□□□ 1.35
ERCC1-210ENST00000589381 PIM2Q9P1W9 311 aa23.46■■□□□ 1.35
ERCC1-210ENST00000589381 GOLGB1Q14789 3259 aaKnown RBP23.46■■□□□ 1.35
ERCC1-210ENST00000589381 SH3TC1Q8TE82 1336 aa23.45■■□□□ 1.34
ERCC1-210ENST00000589381 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
ERCC1-210ENST00000589381 LAMB2P55268 1798 aa23.45■■□□□ 1.34
ERCC1-210ENST00000589381 RIC1Q4ADV7 1423 aa23.44■■□□□ 1.34
ERCC1-210ENST00000589381 CHD4Q14839 1912 aa23.44■■□□□ 1.34
ERCC1-210ENST00000589381 KCNA3P22001 575 aa23.44■■□□□ 1.34
ERCC1-210ENST00000589381 PTPRCP08575 1304 aa23.43■■□□□ 1.34
ERCC1-210ENST00000589381 DDX60Q8IY21 1712 aaKnown RBP23.43■■□□□ 1.34
ERCC1-210ENST00000589381 RARSP54136 660 aaKnown RBP23.43■■□□□ 1.34
ERCC1-210ENST00000589381 ZNF622Q969S3 477 aaKnown RBP eCLIP23.43■■□□□ 1.34
ERCC1-210ENST00000589381 BCS1LQ9Y276 419 aa23.43■■□□□ 1.34
ERCC1-210ENST00000589381 MYH3P11055 1940 aa23.43■■□□□ 1.34
ERCC1-210ENST00000589381 F6X3S4 739 aa23.42■■□□□ 1.34
ERCC1-210ENST00000589381 DALRD3Q5D0E6 543 aaKnown RBP23.42■■□□□ 1.34
ERCC1-210ENST00000589381 YTHDC1Q96MU7 727 aaKnown RBP23.42■■□□□ 1.34
ERCC1-210ENST00000589381 KLRG2A4D1S0 409 aaPredicted RBP23.41■■□□□ 1.34
ERCC1-210ENST00000589381 IGKV5-2P06315 115 aa23.41■■□□□ 1.34
ERCC1-210ENST00000589381 SRGNP10124 158 aa23.41■■□□□ 1.34
ERCC1-210ENST00000589381 SLC10A5Q5PT55 438 aa23.41■■□□□ 1.34
ERCC1-210ENST00000589381 ZBTB38Q8NAP3 1195 aaPredicted RBP23.41■■□□□ 1.34
ERCC1-210ENST00000589381 LINS1Q8NG48 757 aa23.41■■□□□ 1.34
ERCC1-210ENST00000589381 FAM89AQ96GI7 184 aa23.41■■□□□ 1.34
ERCC1-210ENST00000589381 MASTLQ96GX5 879 aa23.41■■□□□ 1.34
ERCC1-210ENST00000589381 NLRP3Q96P20 1036 aa23.41■■□□□ 1.34
ERCC1-210ENST00000589381 NEURL1BA8MQ27 555 aa23.4■■□□□ 1.34
ERCC1-210ENST00000589381 GRIN3BO60391 1043 aa23.4■■□□□ 1.34
ERCC1-210ENST00000589381 NPR1P16066 1061 aa23.4■■□□□ 1.34
ERCC1-210ENST00000589381 YBX3P16989 372 aaKnown RBP eCLIP23.4■■□□□ 1.343e-8■□□□□ 9.1
ERCC1-210ENST00000589381 CWF19L2Q2TBE0 894 aaKnown RBP23.4■■□□□ 1.34
ERCC1-210ENST00000589381 RTL5Q5HYW3 569 aaPredicted RBP23.4■■□□□ 1.34
ERCC1-210ENST00000589381 STYK1Q6J9G0 422 aa23.4■■□□□ 1.34
ERCC1-210ENST00000589381 SLC4A10Q6U841 1118 aa23.4■■□□□ 1.34
ERCC1-210ENST00000589381 TTLL6Q8N841 843 aa23.4■■□□□ 1.34
ERCC1-210ENST00000589381 SLX4Q8IY92 1834 aa23.39■■□□□ 1.33
ERCC1-210ENST00000589381 HCLS1P14317 486 aaPredicted RBP23.39■■□□□ 1.33
ERCC1-210ENST00000589381 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.33
ERCC1-210ENST00000589381 SYNE4Q8N205 404 aa23.39■■□□□ 1.33
ERCC1-210ENST00000589381 RPGRQ92834 1020 aaKnown RBP23.39■■□□□ 1.33
ERCC1-210ENST00000589381 CNKSR1Q969H4 720 aa23.39■■□□□ 1.33
ERCC1-210ENST00000589381 KIF16BQ96L93 1317 aa23.38■■□□□ 1.33
ERCC1-210ENST00000589381 PCCAP05165 728 aaPredicted RBP23.38■■□□□ 1.33
ERCC1-210ENST00000589381 BRPF1P55201 1214 aaPredicted RBP23.38■■□□□ 1.33
ERCC1-210ENST00000589381 UTRNP46939 3433 aa23.37■■□□□ 1.33
ERCC1-210ENST00000589381 IRS4O14654 1257 aaPredicted RBP23.37■■□□□ 1.33
ERCC1-210ENST00000589381 CRY2Q49AN0 593 aa23.37■■□□□ 1.33
ERCC1-210ENST00000589381 BEND3Q5T5X7 828 aa23.36■■□□□ 1.33
ERCC1-210ENST00000589381 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
ERCC1-210ENST00000589381 ALDH1B1P30837 517 aa23.35■■□□□ 1.33
ERCC1-210ENST00000589381 GCKRQ14397 625 aa23.35■■□□□ 1.33
ERCC1-210ENST00000589381 SRCIN1Q9C0H9 1055 aa23.35■■□□□ 1.33
ERCC1-210ENST00000589381 TAF1P21675 1872 aa23.34■■□□□ 1.33
ERCC1-210ENST00000589381 C3orf67Q6ZVT6 689 aa23.34■■□□□ 1.33
ERCC1-210ENST00000589381 JARID2Q92833 1246 aaPredicted RBP23.34■■□□□ 1.33
ERCC1-210ENST00000589381 RBM17Q96I25 401 aaKnown RBP23.34■■□□□ 1.33
ERCC1-210ENST00000589381 API5Q9BZZ5 524 aaKnown RBP23.34■■□□□ 1.33
ERCC1-210ENST00000589381 IPO8O15397 1037 aaKnown RBP23.33■■□□□ 1.33
ERCC1-210ENST00000589381 BCAR3O75815 825 aa23.33■■□□□ 1.33
ERCC1-210ENST00000589381 ALDH1L1O75891 902 aa23.33■■□□□ 1.33
ERCC1-210ENST00000589381 UBE3BQ7Z3V4 1068 aa23.33■■□□□ 1.33
ERCC1-210ENST00000589381 CDHR2Q9BYE9 1310 aa23.33■■□□□ 1.32
ERCC1-210ENST00000589381 HOXA10P31260 410 aaPredicted RBP23.32■■□□□ 1.32
ERCC1-210ENST00000589381 PRPF40BQ6NWY9 871 aaKnown RBP23.32■■□□□ 1.32
ERCC1-210ENST00000589381 CCDC88AQ3V6T2 1871 aa23.31■■□□□ 1.32
ERCC1-210ENST00000589381 H7C1W4 665 aa23.31■■□□□ 1.32
ERCC1-210ENST00000589381 ARHGAP45Q92619 1136 aa23.31■■□□□ 1.32
ERCC1-210ENST00000589381 FRAT1Q92837 279 aaPredicted RBP23.31■■□□□ 1.32
ERCC1-210ENST00000589381 C9orf78Q9NZ63 289 aaPredicted RBP23.31■■□□□ 1.32
ERCC1-210ENST00000589381 PDE8AO60658 829 aa23.3■■□□□ 1.32
ERCC1-210ENST00000589381 DDX46Q7L014 1031 aaKnown RBP23.3■■□□□ 1.32
ERCC1-210ENST00000589381 CRAMP1Q96RY5 1269 aa23.3■■□□□ 1.32
ERCC1-210ENST00000589381 ZNF219Q9P2Y4 722 aaPredicted RBP23.3■■□□□ 1.32
ERCC1-210ENST00000589381 SF3B3Q15393 1217 aaKnown RBP23.29■■□□□ 1.32
ERCC1-210ENST00000589381 FER1L6Q2WGJ9 1857 aa23.29■■□□□ 1.32
ERCC1-210ENST00000589381 ARHGAP27Q6ZUM4 889 aa23.29■■□□□ 1.32
ERCC1-210ENST00000589381 SBF1O95248 1867 aa23.28■■□□□ 1.32
ERCC1-210ENST00000589381 GRM8O00222 908 aa23.28■■□□□ 1.32
ERCC1-210ENST00000589381 C21orf2O43822 256 aa23.28■■□□□ 1.32
ERCC1-210ENST00000589381 SOGA3Q5TF21 947 aa23.28■■□□□ 1.32
ERCC1-210ENST00000589381 CCT4P50991 539 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms