RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 ANKRD36CQ5JPF3 1778 aa25.58■■□□□ 1.69
LINC00654-202ENST00000589201 VAMP4O75379 141 aa25.57■■□□□ 1.68
LINC00654-202ENST00000589201 ZNF428Q96B54 188 aa25.57■■□□□ 1.68
LINC00654-202ENST00000589201 STK31Q9BXU1 1019 aa25.57■■□□□ 1.68
LINC00654-202ENST00000589201 ATP5J2-PTCD1G3V325 749 aa25.56■■□□□ 1.68
LINC00654-202ENST00000589201 C21orf2O43822 256 aa25.56■■□□□ 1.68
LINC00654-202ENST00000589201 ISCA1Q9BUE6 129 aa25.56■■□□□ 1.68
LINC00654-202ENST00000589201 TNRC6CQ9HCJ0 1690 aaKnown RBP25.55■■□□□ 1.68
LINC00654-202ENST00000589201 SLC4A2P04920 1241 aa25.55■■□□□ 1.68
LINC00654-202ENST00000589201 SLC10A5Q5PT55 438 aa25.55■■□□□ 1.68
LINC00654-202ENST00000589201 PRPF40BQ6NWY9 871 aaKnown RBP25.55■■□□□ 1.68
LINC00654-202ENST00000589201 SYNE4Q8N205 404 aa25.55■■□□□ 1.68
LINC00654-202ENST00000589201 TRMT112Q9UI30 125 aaKnown RBP25.55■■□□□ 1.68
LINC00654-202ENST00000589201 SLX4Q8IY92 1834 aa25.55■■□□□ 1.68
LINC00654-202ENST00000589201 CRY2Q49AN0 593 aa25.54■■□□□ 1.68
LINC00654-202ENST00000589201 C3orf67Q6ZVT6 689 aa25.54■■□□□ 1.68
LINC00654-202ENST00000589201 G2E3Q7L622 706 aa25.53■■□□□ 1.68
LINC00654-202ENST00000589201 ARFGEF2Q9Y6D5 1785 aa25.53■■□□□ 1.68
LINC00654-202ENST00000589201 CACNA1SQ13698 1873 aa25.53■■□□□ 1.68
LINC00654-202ENST00000589201 RIC1Q4ADV7 1423 aa25.53■■□□□ 1.68
LINC00654-202ENST00000589201 DDX58O95786 925 aaKnown RBP25.52■■□□□ 1.68
LINC00654-202ENST00000589201 RASSF7Q02833 373 aa25.52■■□□□ 1.68
LINC00654-202ENST00000589201 TRIM28Q13263 835 aaKnown RBP25.52■■□□□ 1.68
LINC00654-202ENST00000589201 RNF123Q5XPI4 1314 aa25.52■■□□□ 1.68
LINC00654-202ENST00000589201 ADCY9O60503 1353 aa25.52■■□□□ 1.68
LINC00654-202ENST00000589201 C9orf131Q5VYM1 1079 aa25.51■■□□□ 1.67
LINC00654-202ENST00000589201 C7orf43Q8WVR3 580 aa25.51■■□□□ 1.67
LINC00654-202ENST00000589201 NLRP3Q96P20 1036 aa25.51■■□□□ 1.67
LINC00654-202ENST00000589201 MYD88Q99836 296 aa25.51■■□□□ 1.67
LINC00654-202ENST00000589201 HCLS1P14317 486 aaPredicted RBP25.5■■□□□ 1.67
LINC00654-202ENST00000589201 ALDH1B1P30837 517 aa25.5■■□□□ 1.67
LINC00654-202ENST00000589201 SH3TC1Q8TE82 1336 aa25.5■■□□□ 1.67
LINC00654-202ENST00000589201 RPGRQ92834 1020 aaKnown RBP25.5■■□□□ 1.67
LINC00654-202ENST00000589201 PI4KAP2A4QPH2 592 aa25.49■■□□□ 1.67
LINC00654-202ENST00000589201 NFKBIEO00221 500 aa25.49■■□□□ 1.67
LINC00654-202ENST00000589201 HOXA10P31260 410 aaPredicted RBP25.49■■□□□ 1.67
LINC00654-202ENST00000589201 KSR2Q6VAB6 950 aa25.49■■□□□ 1.67
LINC00654-202ENST00000589201 PI4KAP1Q8N8J0 262 aa25.49■■□□□ 1.67
LINC00654-202ENST00000589201 MAP3K2Q9Y2U5 619 aa25.49■■□□□ 1.67
LINC00654-202ENST00000589201 PRELPP51888 382 aa25.48■■□□□ 1.67
LINC00654-202ENST00000589201 FAM89AQ96GI7 184 aa25.48■■□□□ 1.67
LINC00654-202ENST00000589201 METTL22Q9BUU2 404 aaPredicted RBP25.48■■□□□ 1.67
LINC00654-202ENST00000589201 RNF181Q9P0P0 153 aa25.48■■□□□ 1.67
LINC00654-202ENST00000589201 SBF1O95248 1867 aa25.48■■□□□ 1.67
LINC00654-202ENST00000589201 E9PSI1 815 aa25.47■■□□□ 1.67
LINC00654-202ENST00000589201 RBM17Q96I25 401 aaKnown RBP25.47■■□□□ 1.67
LINC00654-202ENST00000589201 SLFN5Q08AF3 891 aa25.46■■□□□ 1.67
LINC00654-202ENST00000589201 FLIIQ13045 1269 aa25.46■■□□□ 1.67
LINC00654-202ENST00000589201 RTL5Q5HYW3 569 aaPredicted RBP25.46■■□□□ 1.67
LINC00654-202ENST00000589201 SOGA3Q5TF21 947 aa25.46■■□□□ 1.67
LINC00654-202ENST00000589201 OLFM4Q6UX06 510 aa25.46■■□□□ 1.67
LINC00654-202ENST00000589201 ZNF526Q8TF50 670 aaPredicted RBP25.46■■□□□ 1.67
LINC00654-202ENST00000589201 CDCA7LQ96GN5 454 aa25.46■■□□□ 1.67
LINC00654-202ENST00000589201 LMNB1P20700 586 aa25.45■■□□□ 1.66
LINC00654-202ENST00000589201 CRAMP1Q96RY5 1269 aa25.45■■□□□ 1.66
LINC00654-202ENST00000589201 CCDC191Q8NCU4 936 aa25.44■■□□□ 1.66
LINC00654-202ENST00000589201 FER1L6Q2WGJ9 1857 aa25.44■■□□□ 1.66
LINC00654-202ENST00000589201 CACNA1FO60840 1977 aa25.44■■□□□ 1.66
LINC00654-202ENST00000589201 CCDC93Q567U6 631 aa25.43■■□□□ 1.66
LINC00654-202ENST00000589201 CWC25Q9NXE8 425 aaPredicted RBP25.43■■□□□ 1.66
LINC00654-202ENST00000589201 IGKV5-2P06315 115 aa25.42■■□□□ 1.66
LINC00654-202ENST00000589201 FKBP5Q13451 457 aaPredicted RBP25.42■■□□□ 1.66
LINC00654-202ENST00000589201 ZBTB38Q8NAP3 1195 aaPredicted RBP25.42■■□□□ 1.66
LINC00654-202ENST00000589201 CCDC88AQ3V6T2 1871 aa25.42■■□□□ 1.66
LINC00654-202ENST00000589201 LAMB2P55268 1798 aa25.41■■□□□ 1.66
LINC00654-202ENST00000589201 IRS4O14654 1257 aaPredicted RBP25.41■■□□□ 1.66
LINC00654-202ENST00000589201 JARID2Q92833 1246 aaPredicted RBP25.41■■□□□ 1.66
LINC00654-202ENST00000589201 TAOK3Q9H2K8 898 aa25.41■■□□□ 1.66
LINC00654-202ENST00000589201 GPBP1L1Q9HC44 474 aaPredicted RBP25.41■■□□□ 1.66
LINC00654-202ENST00000589201 LTBP3Q9NS15 1303 aa25.4■■□□□ 1.66
LINC00654-202ENST00000589201 NEXNQ0ZGT2 675 aa25.4■■□□□ 1.66
LINC00654-202ENST00000589201 DDX60Q8IY21 1712 aaKnown RBP25.4■■□□□ 1.66
LINC00654-202ENST00000589201 TRMT2AQ8IZ69 625 aaKnown RBP25.39■■□□□ 1.66
LINC00654-202ENST00000589201 ABCC4O15439 1325 aa25.38■■□□□ 1.65
LINC00654-202ENST00000589201 PPEF1O14829 653 aaPredicted RBP25.38■■□□□ 1.65
LINC00654-202ENST00000589201 PCCAP05165 728 aaPredicted RBP25.38■■□□□ 1.65
LINC00654-202ENST00000589201 CWF19L2Q2TBE0 894 aaKnown RBP25.38■■□□□ 1.65
LINC00654-202ENST00000589201 DDX46Q7L014 1031 aaKnown RBP25.38■■□□□ 1.65
LINC00654-202ENST00000589201 SLC51AQ86UW1 340 aa25.38■■□□□ 1.65
LINC00654-202ENST00000589201 RTKN2Q8IZC4 609 aa25.38■■□□□ 1.65
LINC00654-202ENST00000589201 DNAAF4Q8WXU2 420 aa25.38■■□□□ 1.65
LINC00654-202ENST00000589201 NEURL1BA8MQ27 555 aa25.37■■□□□ 1.65
LINC00654-202ENST00000589201 SF3B3Q15393 1217 aaKnown RBP25.37■■□□□ 1.65
LINC00654-202ENST00000589201 FKBP4Q02790 459 aaKnown RBP eCLIP25.36■■□□□ 1.65
LINC00654-202ENST00000589201 CC2D2BQ6DHV5 1058 aa25.36■■□□□ 1.65
LINC00654-202ENST00000589201 F6X3S4 739 aa25.35■■□□□ 1.65
LINC00654-202ENST00000589201 BBOX1O75936 387 aa25.35■■□□□ 1.65
LINC00654-202ENST00000589201 GRAPQ13588 217 aa25.34■■□□□ 1.65
LINC00654-202ENST00000589201 GRAPLQ8TC17 118 aaPredicted RBP25.34■■□□□ 1.65
LINC00654-202ENST00000589201 ZNF277Q9NRM2 450 aaPredicted RBP25.34■■□□□ 1.65
LINC00654-202ENST00000589201 ATP6V0A2Q9Y487 856 aa25.34■■□□□ 1.65
LINC00654-202ENST00000589201 TAF1P21675 1872 aa25.34■■□□□ 1.65
LINC00654-202ENST00000589201 HSP90B1P14625 803 aaKnown RBP25.33■■□□□ 1.65
LINC00654-202ENST00000589201 MRPL50Q8N5N7 158 aaKnown RBP25.33■■□□□ 1.65
LINC00654-202ENST00000589201 SNED1Q8TER0 1413 aa25.33■■□□□ 1.65
LINC00654-202ENST00000589201 ZC3H4Q9UPT8 1303 aaKnown RBP25.33■■□□□ 1.64
LINC00654-202ENST00000589201 PDE8AO60658 829 aa25.32■■□□□ 1.64
LINC00654-202ENST00000589201 LINS1Q8NG48 757 aa25.32■■□□□ 1.64
LINC00654-202ENST00000589201 DICER1Q9UPY3 1922 aaKnown RBP25.31■■□□□ 1.64
LINC00654-202ENST00000589201 GCKRQ14397 625 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms