RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 PROSER3Q2NL68 480 aa19.07■□□□□ 0.64
DNMT1-217ENST00000589091 CC2D2BQ6DHV5 1058 aa19.07■□□□□ 0.64
DNMT1-217ENST00000589091 CFAP44Q96MT7 982 aa19.07■□□□□ 0.64
DNMT1-217ENST00000589091 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
DNMT1-217ENST00000589091 TAF1P21675 1872 aa19.06■□□□□ 0.64
DNMT1-217ENST00000589091 ANXA1P04083 346 aa19.06■□□□□ 0.64
DNMT1-217ENST00000589091 HOXA10P31260 410 aaPredicted RBP19.06■□□□□ 0.64
DNMT1-217ENST00000589091 GRIPAP1Q4V328 841 aa19.06■□□□□ 0.64
DNMT1-217ENST00000589091 RBM17Q96I25 401 aaKnown RBP19.06■□□□□ 0.64
DNMT1-217ENST00000589091 CALD1Q05682 793 aaKnown RBP19.05■□□□□ 0.64
DNMT1-217ENST00000589091 COPS6Q7L5N1 327 aa19.05■□□□□ 0.64
DNMT1-217ENST00000589091 XAGE3Q8WTP9 111 aa19.05■□□□□ 0.64
DNMT1-217ENST00000589091 NECTIN2Q92692 538 aa19.05■□□□□ 0.64
DNMT1-217ENST00000589091 NLRP3Q96P20 1036 aa19.05■□□□□ 0.64
DNMT1-217ENST00000589091 CRAMP1Q96RY5 1269 aa19.05■□□□□ 0.64
DNMT1-217ENST00000589091 UTP14AQ9BVJ6 771 aaKnown RBP19.05■□□□□ 0.64
DNMT1-217ENST00000589091 CEP350Q5VT06 3117 aa19.05■□□□□ 0.64
DNMT1-217ENST00000589091 AIMP1Q12904 312 aaKnown RBP19.04■□□□□ 0.64
DNMT1-217ENST00000589091 HDGFL1Q5TGJ6 251 aa19.04■□□□□ 0.64
DNMT1-217ENST00000589091 SNED1Q8TER0 1413 aa19.04■□□□□ 0.64
DNMT1-217ENST00000589091 PSMD1Q99460 953 aa19.04■□□□□ 0.64
DNMT1-217ENST00000589091 POTECB2RU33 542 aa19.03■□□□□ 0.64
DNMT1-217ENST00000589091 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
DNMT1-217ENST00000589091 SLC10A5Q5PT55 438 aa19.03■□□□□ 0.64
DNMT1-217ENST00000589091 DBF4Q9UBU7 674 aaPredicted RBP19.03■□□□□ 0.64
DNMT1-217ENST00000589091 IQCA1LA6NCM1 817 aa19.02■□□□□ 0.64
DNMT1-217ENST00000589091 IARSP41252 1262 aaKnown RBP19.02■□□□□ 0.64
DNMT1-217ENST00000589091 GNAI1P63096 354 aa19.02■□□□□ 0.64
DNMT1-217ENST00000589091 TCIRG1Q13488 830 aa19.02■□□□□ 0.64
DNMT1-217ENST00000589091 ZNF277Q9NRM2 450 aaPredicted RBP19.02■□□□□ 0.64
DNMT1-217ENST00000589091 CHPF2Q9P2E5 772 aa19.02■□□□□ 0.64
DNMT1-217ENST00000589091 APAF1O14727 1248 aa19.01■□□□□ 0.63
DNMT1-217ENST00000589091 DDNO94850 711 aaPredicted RBP19.01■□□□□ 0.63
DNMT1-217ENST00000589091 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
DNMT1-217ENST00000589091 SYNE4Q8N205 404 aa19.01■□□□□ 0.63
DNMT1-217ENST00000589091 L3MBTL3Q96JM7 780 aaPredicted RBP19.01■□□□□ 0.63
DNMT1-217ENST00000589091 MBIPQ9NS73 344 aa19.01■□□□□ 0.63
DNMT1-217ENST00000589091 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
DNMT1-217ENST00000589091 LRRC37AA6NMS7 1700 aa19■□□□□ 0.63
DNMT1-217ENST00000589091 MYH3P11055 1940 aa19■□□□□ 0.63
DNMT1-217ENST00000589091 PPEF1O14829 653 aaPredicted RBP19■□□□□ 0.63
DNMT1-217ENST00000589091 ZNF853P0CG23 659 aa19■□□□□ 0.63
DNMT1-217ENST00000589091 DUSP27Q5VZP5 1158 aa19■□□□□ 0.63
DNMT1-217ENST00000589091 NLRP10Q86W26 655 aa19■□□□□ 0.63
DNMT1-217ENST00000589091 DNAJC5GQ8N7S2 189 aa19■□□□□ 0.63
DNMT1-217ENST00000589091 PLBD2Q8NHP8 589 aa19■□□□□ 0.63
DNMT1-217ENST00000589091 TMX4Q9H1E5 349 aaPredicted RBP19■□□□□ 0.63
DNMT1-217ENST00000589091 HYPKQ9NX55 129 aa19■□□□□ 0.63
DNMT1-217ENST00000589091 JDP2Q8WYK2 163 aa18.99■□□□□ 0.63
DNMT1-217ENST00000589091 SH3TC1Q8TE82 1336 aa18.99■□□□□ 0.63
DNMT1-217ENST00000589091 ADAMTSL1Q8N6G6 1762 aa18.98■□□□□ 0.63
DNMT1-217ENST00000589091 FZD9O00144 591 aa18.98■□□□□ 0.63
DNMT1-217ENST00000589091 ANKRD13DQ6ZTN6 518 aa18.98■□□□□ 0.63
DNMT1-217ENST00000589091 KLRG1Q96E93 195 aa18.98■□□□□ 0.63
DNMT1-217ENST00000589091 CHMP4AQ9BY43 222 aa18.98■□□□□ 0.63
DNMT1-217ENST00000589091 TRMT112Q9UI30 125 aaKnown RBP18.98■□□□□ 0.63
DNMT1-217ENST00000589091 C3orf67Q6ZVT6 689 aa18.97■□□□□ 0.63
DNMT1-217ENST00000589091 ZNF541Q9H0D2 1346 aa18.97■□□□□ 0.63
DNMT1-217ENST00000589091 CHADLQ6NUI6 762 aa18.96■□□□□ 0.63
DNMT1-217ENST00000589091 ABCC4O15439 1325 aa18.96■□□□□ 0.63
DNMT1-217ENST00000589091 TRPM7Q96QT4 1865 aa18.95■□□□□ 0.62
DNMT1-217ENST00000589091 GPC2Q8N158 579 aa18.95■□□□□ 0.62
DNMT1-217ENST00000589091 VPS33BQ9H267 617 aa18.95■□□□□ 0.62
DNMT1-217ENST00000589091 HACL1Q9UJ83 578 aa18.95■□□□□ 0.62
DNMT1-217ENST00000589091 ATP6V0A2Q9Y487 856 aa18.95■□□□□ 0.62
DNMT1-217ENST00000589091 COL4A5P29400 1685 aa18.95■□□□□ 0.62
DNMT1-217ENST00000589091 BBOX1O75936 387 aa18.94■□□□□ 0.62
DNMT1-217ENST00000589091 EIF6P56537 245 aaKnown RBP18.94■□□□□ 0.62
DNMT1-217ENST00000589091 DDX46Q7L014 1031 aaKnown RBP18.94■□□□□ 0.62
DNMT1-217ENST00000589091 LDHDQ86WU2 507 aa18.94■□□□□ 0.62
DNMT1-217ENST00000589091 SUPT20HQ8NEM7 779 aa18.94■□□□□ 0.62
DNMT1-217ENST00000589091 ISCA1Q9BUE6 129 aa18.94■□□□□ 0.62
DNMT1-217ENST00000589091 TAF1DQ9H5J8 278 aaPredicted RBP18.94■□□□□ 0.62
DNMT1-217ENST00000589091 HCLS1P14317 486 aaPredicted RBP18.93■□□□□ 0.62
DNMT1-217ENST00000589091 HTRA3P83110 453 aa18.93■□□□□ 0.62
DNMT1-217ENST00000589091 TMC4Q7Z404 712 aa18.93■□□□□ 0.62
DNMT1-217ENST00000589091 LARGE2Q8N3Y3 721 aa18.93■□□□□ 0.62
DNMT1-217ENST00000589091 LTBP1Q14766 1721 aa18.92■□□□□ 0.62
DNMT1-217ENST00000589091 TCERG1O14776 1098 aaKnown RBP18.92■□□□□ 0.62
DNMT1-217ENST00000589091 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
DNMT1-217ENST00000589091 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
DNMT1-217ENST00000589091 PNMA8AQ86V59 439 aaPredicted RBP18.92■□□□□ 0.62
DNMT1-217ENST00000589091 SP8Q8IXZ3 490 aa18.92■□□□□ 0.62
DNMT1-217ENST00000589091 JMYQ8N9B5 988 aa18.92■□□□□ 0.62
DNMT1-217ENST00000589091 TRIM28Q13263 835 aaKnown RBP18.91■□□□□ 0.62
DNMT1-217ENST00000589091 GRAPQ13588 217 aa18.91■□□□□ 0.62
DNMT1-217ENST00000589091 RIC3Q7Z5B4 369 aa18.91■□□□□ 0.62
DNMT1-217ENST00000589091 NIM1KQ8IY84 436 aa18.91■□□□□ 0.62
DNMT1-217ENST00000589091 GRAPLQ8TC17 118 aaPredicted RBP18.91■□□□□ 0.62
DNMT1-217ENST00000589091 ZNF316A6NFI3 1004 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-217ENST00000589091 PPIP5K2O43314 1243 aa18.9■□□□□ 0.62
DNMT1-217ENST00000589091 POTEIP0CG38 1075 aa18.9■□□□□ 0.62
DNMT1-217ENST00000589091 POTEJP0CG39 1038 aa18.9■□□□□ 0.62
DNMT1-217ENST00000589091 HSP90B1P14625 803 aaKnown RBP18.9■□□□□ 0.62
DNMT1-217ENST00000589091 EPHX2P34913 555 aa18.9■□□□□ 0.62
DNMT1-217ENST00000589091 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
DNMT1-217ENST00000589091 CCDC30Q5VVM6 783 aa18.9■□□□□ 0.62
DNMT1-217ENST00000589091 RTFDC1Q9BY42 306 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-217ENST00000589091 SPEF2Q9C093 1822 aa18.89■□□□□ 0.61
DNMT1-217ENST00000589091 ATP5J2-PTCD1G3V325 749 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms