RNA–Protein interactions for RNA: ENST00000588879.5

RANBP3-215, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-215ENST00000588879 SLC10A5Q5PT55 438 aa23.84■■□□□ 1.41
RANBP3-215ENST00000588879 ANKRD13DQ6ZTN6 518 aa23.84■■□□□ 1.41
RANBP3-215ENST00000588879 NLRP10Q86W26 655 aa23.84■■□□□ 1.41
RANBP3-215ENST00000588879 ZNF526Q8TF50 670 aaPredicted RBP23.84■■□□□ 1.41
RANBP3-215ENST00000588879 UTP14AQ9BVJ6 771 aaKnown RBP23.84■■□□□ 1.41
RANBP3-215ENST00000588879 ELL2O00472 640 aaPredicted RBP23.83■■□□□ 1.41
RANBP3-215ENST00000588879 ALDH1B1P30837 517 aa23.83■■□□□ 1.41
RANBP3-215ENST00000588879 WDR63Q8IWG1 891 aa23.83■■□□□ 1.41
RANBP3-215ENST00000588879 CCDC88AQ3V6T2 1871 aa23.82■■□□□ 1.4
RANBP3-215ENST00000588879 SENP3-EIF4A1A0A087X0R7 540 aa23.82■■□□□ 1.4
RANBP3-215ENST00000588879 HOXA10P31260 410 aaPredicted RBP23.82■■□□□ 1.4
RANBP3-215ENST00000588879 TSR2Q969E8 191 aaKnown RBP23.82■■□□□ 1.4
RANBP3-215ENST00000588879 TSPYL6Q8N831 410 aa23.81■■□□□ 1.4
RANBP3-215ENST00000588879 ZNF219Q9P2Y4 722 aaPredicted RBP23.81■■□□□ 1.4
RANBP3-215ENST00000588879 CCDC30Q5VVM6 783 aa23.8■■□□□ 1.4
RANBP3-215ENST00000588879 FAM9BQ8IZU0 186 aa23.8■■□□□ 1.4
RANBP3-215ENST00000588879 ISCA1Q9BUE6 129 aa23.8■■□□□ 1.4
RANBP3-215ENST00000588879 DICER1Q9UPY3 1922 aaKnown RBP23.8■■□□□ 1.4
RANBP3-215ENST00000588879 KIF3CO14782 793 aa23.79■■□□□ 1.4
RANBP3-215ENST00000588879 TAOK3Q9H2K8 898 aa23.79■■□□□ 1.4
RANBP3-215ENST00000588879 TIAM2Q8IVF5 1701 aa23.79■■□□□ 1.4
RANBP3-215ENST00000588879 TRIM28Q13263 835 aaKnown RBP23.78■■□□□ 1.4
RANBP3-215ENST00000588879 CCDC93Q567U6 631 aa23.78■■□□□ 1.4
RANBP3-215ENST00000588879 PHAXQ9H814 394 aaKnown RBP23.78■■□□□ 1.4
RANBP3-215ENST00000588879 C3orf67Q6ZVT6 689 aa23.77■■□□□ 1.4
RANBP3-215ENST00000588879 RPGRQ92834 1020 aaKnown RBP23.77■■□□□ 1.4
RANBP3-215ENST00000588879 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
RANBP3-215ENST00000588879 CRAMP1Q96RY5 1269 aa23.77■■□□□ 1.4
RANBP3-215ENST00000588879 SNED1Q8TER0 1413 aa23.76■■□□□ 1.39
RANBP3-215ENST00000588879 RBM17Q96I25 401 aaKnown RBP23.76■■□□□ 1.39
RANBP3-215ENST00000588879 TRMT112Q9UI30 125 aaKnown RBP23.76■■□□□ 1.39
RANBP3-215ENST00000588879 KDM2BQ8NHM5 1336 aa23.76■■□□□ 1.39
RANBP3-215ENST00000588879 SH3TC1Q8TE82 1336 aa23.76■■□□□ 1.39
RANBP3-215ENST00000588879 FANCIQ9NVI1 1328 aa23.76■■□□□ 1.39
RANBP3-215ENST00000588879 LAMB2P55268 1798 aa23.75■■□□□ 1.39
RANBP3-215ENST00000588879 GOLGA2Q08379 1002 aa23.75■■□□□ 1.39
RANBP3-215ENST00000588879 TWISTNBQ3B726 338 aaPredicted RBP23.75■■□□□ 1.39
RANBP3-215ENST00000588879 RTKN2Q8IZC4 609 aa23.75■■□□□ 1.39
RANBP3-215ENST00000588879 SALL2Q9Y467 1007 aaPredicted RBP23.74■■□□□ 1.39
RANBP3-215ENST00000588879 FKBP4Q02790 459 aaKnown RBP eCLIP23.73■■□□□ 1.397e-6■□□□□ 9.9
RANBP3-215ENST00000588879 CC2D2BQ6DHV5 1058 aa23.73■■□□□ 1.39
RANBP3-215ENST00000588879 RIC3Q7Z5B4 369 aa23.73■■□□□ 1.39
RANBP3-215ENST00000588879 SYNE4Q8N205 404 aa23.73■■□□□ 1.39
RANBP3-215ENST00000588879 NMRK2Q9NPI5 230 aa23.73■■□□□ 1.39
RANBP3-215ENST00000588879 DDX60Q8IY21 1712 aaKnown RBP23.73■■□□□ 1.39
RANBP3-215ENST00000588879 GLTPD2A6NH11 291 aa23.72■■□□□ 1.39
RANBP3-215ENST00000588879 ATP5J2-PTCD1G3V325 749 aa23.72■■□□□ 1.39
RANBP3-215ENST00000588879 OLFM4Q6UX06 510 aa23.72■■□□□ 1.39
RANBP3-215ENST00000588879 DDX58O95786 925 aaKnown RBP23.71■■□□□ 1.39
RANBP3-215ENST00000588879 HCLS1P14317 486 aaPredicted RBP23.71■■□□□ 1.39
RANBP3-215ENST00000588879 GRIPAP1Q4V328 841 aa23.71■■□□□ 1.39
RANBP3-215ENST00000588879 STK31Q9BXU1 1019 aa23.71■■□□□ 1.39
RANBP3-215ENST00000588879 ZNF521Q96K83 1311 aa23.7■■□□□ 1.38
RANBP3-215ENST00000588879 PSMD1Q99460 953 aa23.7■■□□□ 1.38
RANBP3-215ENST00000588879 SPINK5Q9NQ38 1064 aaPredicted RBP23.7■■□□□ 1.38
RANBP3-215ENST00000588879 METTL22Q9BUU2 404 aaPredicted RBP23.69■■□□□ 1.38
RANBP3-215ENST00000588879 CACNA1FO60840 1977 aa23.69■■□□□ 1.38
RANBP3-215ENST00000588879 ABCC4O15439 1325 aa23.68■■□□□ 1.38
RANBP3-215ENST00000588879 PPEF1O14829 653 aaPredicted RBP23.68■■□□□ 1.38
RANBP3-215ENST00000588879 VAMP4O75379 141 aa23.68■■□□□ 1.38
RANBP3-215ENST00000588879 FAM89AQ96GI7 184 aa23.68■■□□□ 1.38
RANBP3-215ENST00000588879 CCER2I3L3R5 266 aa23.67■■□□□ 1.38
RANBP3-215ENST00000588879 TOMM70O94826 608 aa23.67■■□□□ 1.38
RANBP3-215ENST00000588879 EXOSC9Q06265 439 aaKnown RBP23.67■■□□□ 1.38
RANBP3-215ENST00000588879 KSR2Q6VAB6 950 aa23.67■■□□□ 1.38
RANBP3-215ENST00000588879 CCDC191Q8NCU4 936 aa23.67■■□□□ 1.38
RANBP3-215ENST00000588879 MYD88Q99836 296 aa23.67■■□□□ 1.38
RANBP3-215ENST00000588879 MYH16Q9H6N6 1097 aa23.67■■□□□ 1.38
RANBP3-215ENST00000588879 WDR90Q96KV7 1748 aa23.67■■□□□ 1.38
RANBP3-215ENST00000588879 BBOX1O75936 387 aa23.66■■□□□ 1.38
RANBP3-215ENST00000588879 SLC4A2P04920 1241 aa23.66■■□□□ 1.38
RANBP3-215ENST00000588879 SF3B3Q15393 1217 aaKnown RBP23.66■■□□□ 1.38
RANBP3-215ENST00000588879 ZBTB38Q8NAP3 1195 aaPredicted RBP23.66■■□□□ 1.38
RANBP3-215ENST00000588879 RRAGCQ9HB90 399 aa23.66■■□□□ 1.38
RANBP3-215ENST00000588879 ZNF277Q9NRM2 450 aaPredicted RBP23.66■■□□□ 1.38
RANBP3-215ENST00000588879 MAP3K2Q9Y2U5 619 aa23.66■■□□□ 1.38
RANBP3-215ENST00000588879 ATP6V0A2Q9Y487 856 aa23.66■■□□□ 1.38
RANBP3-215ENST00000588879 DPY19L2Q6NUT2 758 aa23.65■■□□□ 1.38
RANBP3-215ENST00000588879 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
RANBP3-215ENST00000588879 PI4KAP2A4QPH2 592 aa23.64■■□□□ 1.37
RANBP3-215ENST00000588879 TCERG1O14776 1098 aaKnown RBP23.64■■□□□ 1.37
RANBP3-215ENST00000588879 G2E3Q7L622 706 aa23.64■■□□□ 1.37
RANBP3-215ENST00000588879 PI4KAP1Q8N8J0 262 aa23.64■■□□□ 1.37
RANBP3-215ENST00000588879 ZNF428Q96B54 188 aa23.64■■□□□ 1.37
RANBP3-215ENST00000588879 IRS4O14654 1257 aaPredicted RBP23.63■■□□□ 1.37
RANBP3-215ENST00000588879 PCCAP05165 728 aaPredicted RBP23.63■■□□□ 1.37
RANBP3-215ENST00000588879 IARSP41252 1262 aaKnown RBP23.63■■□□□ 1.37
RANBP3-215ENST00000588879 GRAPQ13588 217 aa23.63■■□□□ 1.37
RANBP3-215ENST00000588879 RBM46Q8TBY0 533 aaKnown RBP23.63■■□□□ 1.37
RANBP3-215ENST00000588879 GRAPLQ8TC17 118 aaPredicted RBP23.63■■□□□ 1.37
RANBP3-215ENST00000588879 CWC25Q9NXE8 425 aaPredicted RBP23.63■■□□□ 1.37
RANBP3-215ENST00000588879 HSP90B1P14625 803 aaKnown RBP23.62■■□□□ 1.37
RANBP3-215ENST00000588879 VEGFAP15692 232 aaPredicted RBP23.62■■□□□ 1.37
RANBP3-215ENST00000588879 TMC4Q7Z404 712 aa23.62■■□□□ 1.37
RANBP3-215ENST00000588879 SP8Q8IXZ3 490 aa23.62■■□□□ 1.37
RANBP3-215ENST00000588879 POTECB2RU33 542 aa23.61■■□□□ 1.37
RANBP3-215ENST00000588879 IGKV5-2P06315 115 aa23.61■■□□□ 1.37
RANBP3-215ENST00000588879 FLIIQ13045 1269 aa23.61■■□□□ 1.37
RANBP3-215ENST00000588879 SLC51AQ86UW1 340 aa23.61■■□□□ 1.37
RANBP3-215ENST00000588879 TAF1P21675 1872 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms