RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 RXRBP28702 533 aa14.12□□□□□ -0.15
SMAD4-205ENST00000588745 KCNQ4P56696 695 aa14.12□□□□□ -0.15
SMAD4-205ENST00000588745 NLRP10Q86W26 655 aa14.12□□□□□ -0.15
SMAD4-205ENST00000588745 CDHR2Q9BYE9 1310 aa14.12□□□□□ -0.15
SMAD4-205ENST00000588745 GPTP24298 496 aa14.11□□□□□ -0.15
SMAD4-205ENST00000588745 PLEKHM2Q8IWE5 1019 aa14.11□□□□□ -0.15
SMAD4-205ENST00000588745 KIF1BPQ96EK5 621 aa14.11□□□□□ -0.15
SMAD4-205ENST00000588745 C4AP0C0L4 1744 aa14.11□□□□□ -0.15
SMAD4-205ENST00000588745 FOXO4P98177 505 aa14.1□□□□□ -0.15
SMAD4-205ENST00000588745 BMP2KLQ5H9B9 411 aa14.1□□□□□ -0.15
SMAD4-205ENST00000588745 C16orf71Q8IYS4 520 aaPredicted RBP14.1□□□□□ -0.15
SMAD4-205ENST00000588745 ZNF34Q8IZ26 560 aa14.1□□□□□ -0.15
SMAD4-205ENST00000588745 ZBTB38Q8NAP3 1195 aaPredicted RBP14.1□□□□□ -0.15
SMAD4-205ENST00000588745 RHPN1Q8TCX5 695 aa14.1□□□□□ -0.15
SMAD4-205ENST00000588745 PA2G4Q9UQ80 394 aaKnown RBP14.1□□□□□ -0.15
SMAD4-205ENST00000588745 LAMB2P55268 1798 aa14.1□□□□□ -0.15
SMAD4-205ENST00000588745 UBN2Q6ZU65 1347 aa14.1□□□□□ -0.15
SMAD4-205ENST00000588745 RGL2O15211 777 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 RPS6KA4O75676 772 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 TRIM37O94972 964 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 RFX5P48382 616 aaPredicted RBP14.09□□□□□ -0.15
SMAD4-205ENST00000588745 OS9Q13438 667 aaPredicted RBP14.09□□□□□ -0.15
SMAD4-205ENST00000588745 RTL5Q5HYW3 569 aaPredicted RBP14.09□□□□□ -0.15
SMAD4-205ENST00000588745 ERC1Q8IUD2 1116 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 OTUD7AQ8TE49 926 aaPredicted RBP14.09□□□□□ -0.15
SMAD4-205ENST00000588745 PLA2G12BQ9BX93 195 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 RGS17Q9UGC6 210 aaPredicted RBP14.09□□□□□ -0.15
SMAD4-205ENST00000588745 ZNF652Q9Y2D9 606 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 SALL3Q9BXA9 1300 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 MYH3P11055 1940 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 GNPATO15228 680 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 LMBR1LQ6UX01 489 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 COPRSQ9NQ92 184 aa14.09□□□□□ -0.15
SMAD4-205ENST00000588745 TNS1Q9HBL0 1735 aaKnown RBP14.08□□□□□ -0.15
SMAD4-205ENST00000588745 TUBGCP6Q96RT7 1819 aa14.08□□□□□ -0.15
SMAD4-205ENST00000588745 PARP10Q53GL7 1025 aa14.08□□□□□ -0.16
SMAD4-205ENST00000588745 SLC27A3Q5K4L6 730 aa14.08□□□□□ -0.16
SMAD4-205ENST00000588745 TTC22Q5TAA0 569 aa14.08□□□□□ -0.16
SMAD4-205ENST00000588745 CLEC4GQ6UXB4 293 aa14.08□□□□□ -0.16
SMAD4-205ENST00000588745 FAM89AQ96GI7 184 aa14.08□□□□□ -0.16
SMAD4-205ENST00000588745 BCL11AQ9H165 835 aa14.08□□□□□ -0.16
SMAD4-205ENST00000588745 OSBPL3Q9H4L5 887 aa14.08□□□□□ -0.16
SMAD4-205ENST00000588745 IL1RAPL2Q9NP60 686 aa14.08□□□□□ -0.16
SMAD4-205ENST00000588745 UBR3Q6ZT12 1888 aa14.07□□□□□ -0.16
SMAD4-205ENST00000588745 COL24A1Q17RW2 1714 aa14.07□□□□□ -0.16
SMAD4-205ENST00000588745 RGPD3A6NKT7 1758 aaPredicted RBP14.07□□□□□ -0.16
SMAD4-205ENST00000588745 RGPD4Q7Z3J3 1758 aa14.07□□□□□ -0.16
SMAD4-205ENST00000588745 MX1P20591 662 aa14.07□□□□□ -0.16
SMAD4-205ENST00000588745 PTPN12Q05209 780 aaKnown RBP14.07□□□□□ -0.16
SMAD4-205ENST00000588745 G3BP1Q13283 466 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMAD4-205ENST00000588745 POTEAQ6S8J7 498 aa14.07□□□□□ -0.16
SMAD4-205ENST00000588745 LRRC4BQ9NT99 713 aa14.07□□□□□ -0.16
SMAD4-205ENST00000588745 TRMT112Q9UI30 125 aaKnown RBP14.07□□□□□ -0.16
SMAD4-205ENST00000588745 RTCBQ9Y3I0 505 aaKnown RBP14.07□□□□□ -0.16
SMAD4-205ENST00000588745 DDX60Q8IY21 1712 aaKnown RBP14.06□□□□□ -0.16
SMAD4-205ENST00000588745 GSPT1P15170 499 aaKnown RBP14.06□□□□□ -0.16
SMAD4-205ENST00000588745 PDE1AP54750 535 aa14.06□□□□□ -0.16
SMAD4-205ENST00000588745 KLHDC4Q8TBB5 520 aa14.06□□□□□ -0.16
SMAD4-205ENST00000588745 AK7Q96M32 723 aa14.06□□□□□ -0.16
SMAD4-205ENST00000588745 NARFQ9UHQ1 456 aa14.06□□□□□ -0.16
SMAD4-205ENST00000588745 CHMP3Q9Y3E7 222 aa14.06□□□□□ -0.16
SMAD4-205ENST00000588745 AOX1Q06278 1338 aa14.05□□□□□ -0.16
SMAD4-205ENST00000588745 SUSD4Q5VX71 490 aa14.05□□□□□ -0.16
SMAD4-205ENST00000588745 SIL1Q9H173 461 aa14.05□□□□□ -0.16
SMAD4-205ENST00000588745 STAP2Q9UGK3 403 aa14.05□□□□□ -0.16
SMAD4-205ENST00000588745 NIP7Q9Y221 180 aaKnown RBP eCLIP14.05□□□□□ -0.16
SMAD4-205ENST00000588745 SH3TC1Q8TE82 1336 aa14.04□□□□□ -0.16
SMAD4-205ENST00000588745 LRP5O75197 1615 aa14.04□□□□□ -0.16
SMAD4-205ENST00000588745 IRS4O14654 1257 aaPredicted RBP14.04□□□□□ -0.16
SMAD4-205ENST00000588745 SASH1O94885 1247 aa14.04□□□□□ -0.16
SMAD4-205ENST00000588745 NTSR2O95665 410 aa14.04□□□□□ -0.16
SMAD4-205ENST00000588745 CSF1RP07333 972 aa14.04□□□□□ -0.16
SMAD4-205ENST00000588745 CLASRPQ8N2M8 674 aaKnown RBP14.04□□□□□ -0.16
SMAD4-205ENST00000588745 UTP14AQ9BVJ6 771 aaKnown RBP14.04□□□□□ -0.16
SMAD4-205ENST00000588745 BCL2L12Q9HB09 334 aa14.04□□□□□ -0.16
SMAD4-205ENST00000588745 EP400Q96L91 3159 aa14.03□□□□□ -0.16
SMAD4-205ENST00000588745 PDE8AO60658 829 aa14.03□□□□□ -0.16
SMAD4-205ENST00000588745 ADRA2BP18089 450 aa14.03□□□□□ -0.16
SMAD4-205ENST00000588745 HMGB2P26583 209 aaKnown RBP14.03□□□□□ -0.16
SMAD4-205ENST00000588745 CTSWP56202 376 aa14.03□□□□□ -0.16
SMAD4-205ENST00000588745 USPL1Q5W0Q7 1092 aa14.03□□□□□ -0.16
SMAD4-205ENST00000588745 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
SMAD4-205ENST00000588745 NUTM1Q86Y26 1132 aa14.03□□□□□ -0.16
SMAD4-205ENST00000588745 SYNE4Q8N205 404 aa14.03□□□□□ -0.16
SMAD4-205ENST00000588745 SRP68Q9UHB9 627 aaKnown RBP14.03□□□□□ -0.16
SMAD4-205ENST00000588745 USP42Q9H9J4 1324 aaKnown RBP14.03□□□□□ -0.16
SMAD4-205ENST00000588745 PLSCR1O15162 318 aa14.02□□□□□ -0.17
SMAD4-205ENST00000588745 ZPR1O75312 459 aa14.02□□□□□ -0.17
SMAD4-205ENST00000588745 TXNRD1Q16881 649 aa14.02□□□□□ -0.17
SMAD4-205ENST00000588745 CCDC57Q2TAC2 916 aa14.02□□□□□ -0.17
SMAD4-205ENST00000588745 SMIM5Q71RC9 77 aa14.02□□□□□ -0.17
SMAD4-205ENST00000588745 ARHGEF1Q92888 912 aaKnown RBP14.02□□□□□ -0.17
SMAD4-205ENST00000588745 CDC45O75419 566 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 CIAO1O76071 339 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 PHF14O94880 888 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 HSP90B1P14625 803 aaKnown RBP14.01□□□□□ -0.17
SMAD4-205ENST00000588745 TRAPPC3LQ5T215 181 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 TSHZ3Q63HK5 1081 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 AACSQ86V21 672 aa14.01□□□□□ -0.17
SMAD4-205ENST00000588745 TTLL11Q8NHH1 800 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms