RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 ERFEQ4G0M1 354 aa20.65■□□□□ 0.9
RETREG3-206ENST00000588423 E9PSI1 815 aa20.64■□□□□ 0.89
RETREG3-206ENST00000588423 TRIM28Q13263 835 aaKnown RBP20.64■□□□□ 0.89
RETREG3-206ENST00000588423 CRY2Q49AN0 593 aa20.64■□□□□ 0.89
RETREG3-206ENST00000588423 ARHGAP27Q6ZUM4 889 aa20.64■□□□□ 0.89
RETREG3-206ENST00000588423 RIC3Q7Z5B4 369 aa20.64■□□□□ 0.89
RETREG3-206ENST00000588423 ISCA1Q9BUE6 129 aa20.64■□□□□ 0.89
RETREG3-206ENST00000588423 SLC10A5Q5PT55 438 aa20.63■□□□□ 0.89
RETREG3-206ENST00000588423 ARFGEF2Q9Y6D5 1785 aa20.62■□□□□ 0.89
RETREG3-206ENST00000588423 TNRC6CQ9HCJ0 1690 aaKnown RBP20.62■□□□□ 0.89
RETREG3-206ENST00000588423 ADCY9O60503 1353 aa20.61■□□□□ 0.89
RETREG3-206ENST00000588423 SLC4A2P04920 1241 aa20.61■□□□□ 0.89
RETREG3-206ENST00000588423 SH3TC1Q8TE82 1336 aa20.6■□□□□ 0.89
RETREG3-206ENST00000588423 ALDH1B1P30837 517 aa20.6■□□□□ 0.89
RETREG3-206ENST00000588423 PRPF40BQ6NWY9 871 aaKnown RBP20.6■□□□□ 0.89
RETREG3-206ENST00000588423 TRMT112Q9UI30 125 aaKnown RBP20.6■□□□□ 0.89
RETREG3-206ENST00000588423 HOXA10P31260 410 aaPredicted RBP20.59■□□□□ 0.89
RETREG3-206ENST00000588423 SLFN5Q08AF3 891 aa20.59■□□□□ 0.89
RETREG3-206ENST00000588423 SOGA3Q5TF21 947 aa20.59■□□□□ 0.89
RETREG3-206ENST00000588423 KSR2Q6VAB6 950 aa20.59■□□□□ 0.89
RETREG3-206ENST00000588423 ZNF784Q8NCA9 323 aaPredicted RBP20.59■□□□□ 0.89
RETREG3-206ENST00000588423 NLRP3Q96P20 1036 aa20.59■□□□□ 0.89
RETREG3-206ENST00000588423 METTL22Q9BUU2 404 aaPredicted RBP20.59■□□□□ 0.89
RETREG3-206ENST00000588423 ATP5J2-PTCD1G3V325 749 aa20.58■□□□□ 0.89
RETREG3-206ENST00000588423 TCERG1O14776 1098 aaKnown RBP20.58■□□□□ 0.89
RETREG3-206ENST00000588423 PI4KAP2A4QPH2 592 aa20.57■□□□□ 0.88
RETREG3-206ENST00000588423 C21orf2O43822 256 aa20.57■□□□□ 0.88
RETREG3-206ENST00000588423 FLIIQ13045 1269 aa20.57■□□□□ 0.88
RETREG3-206ENST00000588423 PI4KAP1Q8N8J0 262 aa20.57■□□□□ 0.88
RETREG3-206ENST00000588423 CCDC191Q8NCU4 936 aa20.57■□□□□ 0.88
RETREG3-206ENST00000588423 RPGRQ92834 1020 aaKnown RBP20.57■□□□□ 0.88
RETREG3-206ENST00000588423 MYD88Q99836 296 aa20.57■□□□□ 0.88
RETREG3-206ENST00000588423 MAP3K2Q9Y2U5 619 aa20.57■□□□□ 0.88
RETREG3-206ENST00000588423 G2E3Q7L622 706 aa20.56■□□□□ 0.88
RETREG3-206ENST00000588423 C7orf43Q8WVR3 580 aa20.56■□□□□ 0.88
RETREG3-206ENST00000588423 SLX4Q8IY92 1834 aa20.55■□□□□ 0.88
RETREG3-206ENST00000588423 TRMT2AQ8IZ69 625 aaKnown RBP20.55■□□□□ 0.88
RETREG3-206ENST00000588423 ZBTB38Q8NAP3 1195 aaPredicted RBP20.55■□□□□ 0.88
RETREG3-206ENST00000588423 RBM17Q96I25 401 aaKnown RBP20.55■□□□□ 0.88
RETREG3-206ENST00000588423 CRAMP1Q96RY5 1269 aa20.55■□□□□ 0.88
RETREG3-206ENST00000588423 CACNA1FO60840 1977 aa20.55■□□□□ 0.88
RETREG3-206ENST00000588423 LTBP3Q9NS15 1303 aa20.54■□□□□ 0.88
RETREG3-206ENST00000588423 NEXNQ0ZGT2 675 aa20.54■□□□□ 0.88
RETREG3-206ENST00000588423 C3orf67Q6ZVT6 689 aa20.54■□□□□ 0.88
RETREG3-206ENST00000588423 SYNE4Q8N205 404 aa20.54■□□□□ 0.88
RETREG3-206ENST00000588423 FAM89AQ96GI7 184 aa20.54■□□□□ 0.88
RETREG3-206ENST00000588423 NFKBIEO00221 500 aa20.53■□□□□ 0.88
RETREG3-206ENST00000588423 HCLS1P14317 486 aaPredicted RBP20.53■□□□□ 0.88
RETREG3-206ENST00000588423 HSP90B1P14625 803 aaKnown RBP20.53■□□□□ 0.88
RETREG3-206ENST00000588423 FKBP5Q13451 457 aaPredicted RBP20.53■□□□□ 0.88
RETREG3-206ENST00000588423 C9orf131Q5VYM1 1079 aa20.53■□□□□ 0.88
RETREG3-206ENST00000588423 ZNF428Q96B54 188 aa20.53■□□□□ 0.88
RETREG3-206ENST00000588423 CWC25Q9NXE8 425 aaPredicted RBP20.53■□□□□ 0.88
RETREG3-206ENST00000588423 PCCAP05165 728 aaPredicted RBP20.52■□□□□ 0.88
RETREG3-206ENST00000588423 IGKV5-2P06315 115 aa20.52■□□□□ 0.88
RETREG3-206ENST00000588423 LMNB1P20700 586 aa20.52■□□□□ 0.88
RETREG3-206ENST00000588423 RASSF7Q02833 373 aa20.52■□□□□ 0.88
RETREG3-206ENST00000588423 CCDC93Q567U6 631 aa20.52■□□□□ 0.88
RETREG3-206ENST00000588423 CDCA7LQ96GN5 454 aa20.52■□□□□ 0.88
RETREG3-206ENST00000588423 ZNF219Q9P2Y4 722 aaPredicted RBP20.52■□□□□ 0.88
RETREG3-206ENST00000588423 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
RETREG3-206ENST00000588423 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
RETREG3-206ENST00000588423 CACNA1SQ13698 1873 aa20.51■□□□□ 0.87
RETREG3-206ENST00000588423 FER1L6Q2WGJ9 1857 aa20.51■□□□□ 0.87
RETREG3-206ENST00000588423 ZC3H4Q9UPT8 1303 aaKnown RBP20.51■□□□□ 0.87
RETREG3-206ENST00000588423 DDX60Q8IY21 1712 aaKnown RBP20.5■□□□□ 0.87
RETREG3-206ENST00000588423 IRS4O14654 1257 aaPredicted RBP20.5■□□□□ 0.87
RETREG3-206ENST00000588423 SF3B3Q15393 1217 aaKnown RBP20.5■□□□□ 0.87
RETREG3-206ENST00000588423 GRIPAP1Q4V328 841 aa20.5■□□□□ 0.87
RETREG3-206ENST00000588423 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
RETREG3-206ENST00000588423 DNAAF4Q8WXU2 420 aa20.5■□□□□ 0.87
RETREG3-206ENST00000588423 TAOK3Q9H2K8 898 aa20.5■□□□□ 0.87
RETREG3-206ENST00000588423 LAMB2P55268 1798 aa20.49■□□□□ 0.87
RETREG3-206ENST00000588423 NEURL1BA8MQ27 555 aa20.49■□□□□ 0.87
RETREG3-206ENST00000588423 CT47B1P0C2W7 299 aaPredicted RBP20.49■□□□□ 0.87
RETREG3-206ENST00000588423 SBF1O95248 1867 aa20.49■□□□□ 0.87
RETREG3-206ENST00000588423 ABCC4O15439 1325 aa20.49■□□□□ 0.87
RETREG3-206ENST00000588423 CDHR2Q9BYE9 1310 aa20.49■□□□□ 0.87
RETREG3-206ENST00000588423 SNED1Q8TER0 1413 aa20.48■□□□□ 0.87
RETREG3-206ENST00000588423 PRELPP51888 382 aa20.48■□□□□ 0.87
RETREG3-206ENST00000588423 DDX46Q7L014 1031 aaKnown RBP20.48■□□□□ 0.87
RETREG3-206ENST00000588423 PPEF1O14829 653 aaPredicted RBP20.47■□□□□ 0.87
RETREG3-206ENST00000588423 BBOX1O75936 387 aa20.47■□□□□ 0.87
RETREG3-206ENST00000588423 FKBP4Q02790 459 aaKnown RBP eCLIP20.47■□□□□ 0.87
RETREG3-206ENST00000588423 GRAPQ13588 217 aa20.47■□□□□ 0.87
RETREG3-206ENST00000588423 RTL5Q5HYW3 569 aaPredicted RBP20.47■□□□□ 0.87
RETREG3-206ENST00000588423 LINS1Q8NG48 757 aa20.47■□□□□ 0.87
RETREG3-206ENST00000588423 GRAPLQ8TC17 118 aaPredicted RBP20.47■□□□□ 0.87
RETREG3-206ENST00000588423 PDE8AO60658 829 aa20.46■□□□□ 0.87
RETREG3-206ENST00000588423 CWF19L2Q2TBE0 894 aaKnown RBP20.46■□□□□ 0.87
RETREG3-206ENST00000588423 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
RETREG3-206ENST00000588423 TMC4Q7Z404 712 aa20.45■□□□□ 0.86
RETREG3-206ENST00000588423 MRPL50Q8N5N7 158 aaKnown RBP20.45■□□□□ 0.86
RETREG3-206ENST00000588423 PSMD1Q99460 953 aa20.45■□□□□ 0.86
RETREG3-206ENST00000588423 GPBP1L1Q9HC44 474 aaPredicted RBP20.45■□□□□ 0.86
RETREG3-206ENST00000588423 ATP6V0A2Q9Y487 856 aa20.45■□□□□ 0.86
RETREG3-206ENST00000588423 H7C1W4 665 aa20.44■□□□□ 0.86
RETREG3-206ENST00000588423 HNRNPUQ00839 825 aaKnown RBP eCLIP20.44■□□□□ 0.86
RETREG3-206ENST00000588423 GCKRQ14397 625 aa20.44■□□□□ 0.86
RETREG3-206ENST00000588423 OLFM4Q6UX06 510 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms