RNA–Protein interactions for RNA: ENST00000588390.1

ATP5A1-207, Transcript of ATP synthase subunit alpha, mitochondrial, humanhuman

TSL 1 (best)

Gene ATP5A1, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5A1-207ENST00000588390 PPP1R42Q7Z4L9 355 aa25.32■■□□□ 1.64
ATP5A1-207ENST00000588390 RRAGCQ9HB90 399 aa25.32■■□□□ 1.64
ATP5A1-207ENST00000588390 GNAI1P63096 354 aa25.31■■□□□ 1.64
ATP5A1-207ENST00000588390 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
ATP5A1-207ENST00000588390 GLTPD2A6NH11 291 aa25.3■■□□□ 1.64
ATP5A1-207ENST00000588390 HSPA6P17066 643 aa25.3■■□□□ 1.64
ATP5A1-207ENST00000588390 C16orf71Q8IYS4 520 aaPredicted RBP25.3■■□□□ 1.64
ATP5A1-207ENST00000588390 RPGRQ92834 1020 aaKnown RBP25.3■■□□□ 1.64
ATP5A1-207ENST00000588390 ALDH1B1P30837 517 aa25.29■■□□□ 1.64
ATP5A1-207ENST00000588390 HSP90AB3PQ58FF7 597 aa25.29■■□□□ 1.64
ATP5A1-207ENST00000588390 C3orf67Q6ZVT6 689 aa25.29■■□□□ 1.64
ATP5A1-207ENST00000588390 UTP14AQ9BVJ6 771 aaKnown RBP25.29■■□□□ 1.64
ATP5A1-207ENST00000588390 DBF4Q9UBU7 674 aaPredicted RBP25.29■■□□□ 1.64
ATP5A1-207ENST00000588390 WDR90Q96KV7 1748 aa25.28■■□□□ 1.64
ATP5A1-207ENST00000588390 NLRP10Q86W26 655 aa25.27■■□□□ 1.64
ATP5A1-207ENST00000588390 ELL2O00472 640 aaPredicted RBP25.26■■□□□ 1.63
ATP5A1-207ENST00000588390 FKBP4Q02790 459 aaKnown RBP eCLIP25.26■■□□□ 1.63
ATP5A1-207ENST00000588390 TCIRG1Q13488 830 aa25.26■■□□□ 1.63
ATP5A1-207ENST00000588390 ZNF428Q96B54 188 aa25.26■■□□□ 1.63
ATP5A1-207ENST00000588390 DDX60Q8IY21 1712 aaKnown RBP25.26■■□□□ 1.63
ATP5A1-207ENST00000588390 RBM46Q8TBY0 533 aaKnown RBP25.25■■□□□ 1.63
ATP5A1-207ENST00000588390 SNED1Q8TER0 1413 aa25.25■■□□□ 1.63
ATP5A1-207ENST00000588390 RNF123Q5XPI4 1314 aa25.24■■□□□ 1.63
ATP5A1-207ENST00000588390 HOXA10P31260 410 aaPredicted RBP25.24■■□□□ 1.63
ATP5A1-207ENST00000588390 SLC51AQ86UW1 340 aa25.24■■□□□ 1.63
ATP5A1-207ENST00000588390 PLBD2Q8NHP8 589 aa25.24■■□□□ 1.63
ATP5A1-207ENST00000588390 RBM17Q96I25 401 aaKnown RBP25.24■■□□□ 1.63
ATP5A1-207ENST00000588390 ZNF277Q9NRM2 450 aaPredicted RBP25.24■■□□□ 1.63
ATP5A1-207ENST00000588390 HYPKQ9NX55 129 aa25.24■■□□□ 1.63
ATP5A1-207ENST00000588390 ANKRD13DQ6ZTN6 518 aa25.23■■□□□ 1.63
ATP5A1-207ENST00000588390 RTKN2Q8IZC4 609 aa25.23■■□□□ 1.63
ATP5A1-207ENST00000588390 C8orf58Q8NAV2 365 aa25.23■■□□□ 1.63
ATP5A1-207ENST00000588390 NLRP3Q96P20 1036 aa25.23■■□□□ 1.63
ATP5A1-207ENST00000588390 PPEF1O14829 653 aaPredicted RBP25.22■■□□□ 1.63
ATP5A1-207ENST00000588390 DPY19L2Q6NUT2 758 aa25.22■■□□□ 1.63
ATP5A1-207ENST00000588390 SYNE4Q8N205 404 aa25.22■■□□□ 1.63
ATP5A1-207ENST00000588390 TSR2Q969E8 191 aaKnown RBP25.22■■□□□ 1.63
ATP5A1-207ENST00000588390 TRMT112Q9UI30 125 aaKnown RBP25.22■■□□□ 1.63
ATP5A1-207ENST00000588390 HCLS1P14317 486 aaPredicted RBP25.21■■□□□ 1.63
ATP5A1-207ENST00000588390 VEGFAP15692 232 aaPredicted RBP25.21■■□□□ 1.63
ATP5A1-207ENST00000588390 SLC10A5Q5PT55 438 aa25.21■■□□□ 1.63
ATP5A1-207ENST00000588390 CRAMP1Q96RY5 1269 aa25.21■■□□□ 1.63
ATP5A1-207ENST00000588390 TAF1P21675 1872 aa25.21■■□□□ 1.63
ATP5A1-207ENST00000588390 SH3TC1Q8TE82 1336 aa25.2■■□□□ 1.62
ATP5A1-207ENST00000588390 ATP5J2-PTCD1G3V325 749 aa25.2■■□□□ 1.62
ATP5A1-207ENST00000588390 TCERG1O14776 1098 aaKnown RBP25.2■■□□□ 1.62
ATP5A1-207ENST00000588390 CCDC27Q2M243 656 aa25.2■■□□□ 1.62
ATP5A1-207ENST00000588390 WWC1Q8IX03 1113 aa25.2■■□□□ 1.62
ATP5A1-207ENST00000588390 PHAXQ9H814 394 aaKnown RBP25.19■■□□□ 1.62
ATP5A1-207ENST00000588390 ABCC4O15439 1325 aa25.18■■□□□ 1.62
ATP5A1-207ENST00000588390 POTECB2RU33 542 aa25.18■■□□□ 1.62
ATP5A1-207ENST00000588390 DDNO94850 711 aaPredicted RBP25.18■■□□□ 1.62
ATP5A1-207ENST00000588390 GOLGA2Q08379 1002 aa25.18■■□□□ 1.62
ATP5A1-207ENST00000588390 TSPYL6Q8N831 410 aa25.18■■□□□ 1.62
ATP5A1-207ENST00000588390 ISCA1Q9BUE6 129 aa25.18■■□□□ 1.62
ATP5A1-207ENST00000588390 IARSP41252 1262 aaKnown RBP25.17■■□□□ 1.62
ATP5A1-207ENST00000588390 FSTL1Q12841 308 aa25.17■■□□□ 1.62
ATP5A1-207ENST00000588390 CC2D2BQ6DHV5 1058 aa25.17■■□□□ 1.62
ATP5A1-207ENST00000588390 PSMD1Q99460 953 aa25.17■■□□□ 1.62
ATP5A1-207ENST00000588390 COL4A5P29400 1685 aa25.17■■□□□ 1.62
ATP5A1-207ENST00000588390 ZNF541Q9H0D2 1346 aa25.16■■□□□ 1.62
ATP5A1-207ENST00000588390 RIC3Q7Z5B4 369 aa25.16■■□□□ 1.62
ATP5A1-207ENST00000588390 SMC1BQ8NDV3 1235 aa25.16■■□□□ 1.62
ATP5A1-207ENST00000588390 APLP1P51693 650 aa25.15■■□□□ 1.62
ATP5A1-207ENST00000588390 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
ATP5A1-207ENST00000588390 SCN4AP35499 1836 aa25.14■■□□□ 1.62
ATP5A1-207ENST00000588390 CCDC30Q5VVM6 783 aa25.14■■□□□ 1.62
ATP5A1-207ENST00000588390 FAM89AQ96GI7 184 aa25.14■■□□□ 1.62
ATP5A1-207ENST00000588390 IL16Q14005 1332 aa25.12■■□□□ 1.61
ATP5A1-207ENST00000588390 RTL5Q5HYW3 569 aaPredicted RBP25.12■■□□□ 1.61
ATP5A1-207ENST00000588390 MYD88Q99836 296 aa25.12■■□□□ 1.61
ATP5A1-207ENST00000588390 ATP6V0A2Q9Y487 856 aa25.12■■□□□ 1.61
ATP5A1-207ENST00000588390 LRRC37AA6NMS7 1700 aa25.12■■□□□ 1.61
ATP5A1-207ENST00000588390 DDX46Q7L014 1031 aaKnown RBP25.11■■□□□ 1.61
ATP5A1-207ENST00000588390 COL4A1P02462 1669 aa25.1■■□□□ 1.61
ATP5A1-207ENST00000588390 TWISTNBQ3B726 338 aaPredicted RBP25.1■■□□□ 1.61
ATP5A1-207ENST00000588390 GRIPAP1Q4V328 841 aa25.1■■□□□ 1.61
ATP5A1-207ENST00000588390 NCBP3Q53F19 620 aaKnown RBP25.1■■□□□ 1.61
ATP5A1-207ENST00000588390 FAM9BQ8IZU0 186 aa25.1■■□□□ 1.61
ATP5A1-207ENST00000588390 TMX4Q9H1E5 349 aaPredicted RBP25.1■■□□□ 1.61
ATP5A1-207ENST00000588390 FANCIQ9NVI1 1328 aa25.1■■□□□ 1.61
ATP5A1-207ENST00000588390 FZD9O00144 591 aa25.09■■□□□ 1.61
ATP5A1-207ENST00000588390 HTRA3P83110 453 aa25.09■■□□□ 1.61
ATP5A1-207ENST00000588390 TRIM28Q13263 835 aaKnown RBP25.09■■□□□ 1.61
ATP5A1-207ENST00000588390 GRAPQ13588 217 aa25.09■■□□□ 1.61
ATP5A1-207ENST00000588390 GRAPLQ8TC17 118 aaPredicted RBP25.09■■□□□ 1.61
ATP5A1-207ENST00000588390 JDP2Q8WYK2 163 aa25.09■■□□□ 1.61
ATP5A1-207ENST00000588390 CHMP4AQ9BY43 222 aa25.09■■□□□ 1.61
ATP5A1-207ENST00000588390 DDX58O95786 925 aaKnown RBP25.08■■□□□ 1.61
ATP5A1-207ENST00000588390 L3MBTL3Q96JM7 780 aaPredicted RBP25.08■■□□□ 1.61
ATP5A1-207ENST00000588390 STK31Q9BXU1 1019 aa25.08■■□□□ 1.61
ATP5A1-207ENST00000588390 IRS4O14654 1257 aaPredicted RBP25.07■■□□□ 1.6
ATP5A1-207ENST00000588390 BBOX1O75936 387 aa25.07■■□□□ 1.6
ATP5A1-207ENST00000588390 LARGE2Q8N3Y3 721 aa25.07■■□□□ 1.6
ATP5A1-207ENST00000588390 IQCA1LA6NCM1 817 aa25.06■■□□□ 1.6
ATP5A1-207ENST00000588390 POTEIP0CG38 1075 aa25.06■■□□□ 1.6
ATP5A1-207ENST00000588390 POTEJP0CG39 1038 aa25.06■■□□□ 1.6
ATP5A1-207ENST00000588390 DUOX1Q9NRD9 1551 aa25.05■■□□□ 1.6
ATP5A1-207ENST00000588390 PPIP5K2O43314 1243 aa25.05■■□□□ 1.6
ATP5A1-207ENST00000588390 AOC3Q16853 763 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms