RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SLC10A5Q5PT55 438 aa12.97□□□□□ -0.33
TPM4-207ENST00000588032 ARHGAP27Q6ZUM4 889 aa12.97□□□□□ -0.33
TPM4-207ENST00000588032 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
TPM4-207ENST00000588032 KCNA4P22459 653 aa12.96□□□□□ -0.33
TPM4-207ENST00000588032 ALDH1B1P30837 517 aa12.96□□□□□ -0.33
TPM4-207ENST00000588032 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
TPM4-207ENST00000588032 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.33
TPM4-207ENST00000588032 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.33
TPM4-207ENST00000588032 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.34
TPM4-207ENST00000588032 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
TPM4-207ENST00000588032 CRY2Q49AN0 593 aa12.95□□□□□ -0.34
TPM4-207ENST00000588032 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
TPM4-207ENST00000588032 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
TPM4-207ENST00000588032 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
TPM4-207ENST00000588032 TRMT112Q9UI30 125 aaKnown RBP12.95□□□□□ -0.34
TPM4-207ENST00000588032 SH3TC1Q8TE82 1336 aa12.94□□□□□ -0.34
TPM4-207ENST00000588032 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
TPM4-207ENST00000588032 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
TPM4-207ENST00000588032 METTL22Q9BUU2 404 aaPredicted RBP12.94□□□□□ -0.34
TPM4-207ENST00000588032 BRCA1P38398 1863 aaKnown RBP12.93□□□□□ -0.34
TPM4-207ENST00000588032 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
TPM4-207ENST00000588032 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
TPM4-207ENST00000588032 TCERG1O14776 1098 aaKnown RBP12.93□□□□□ -0.34
TPM4-207ENST00000588032 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
TPM4-207ENST00000588032 NEXNQ0ZGT2 675 aa12.93□□□□□ -0.34
TPM4-207ENST00000588032 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
TPM4-207ENST00000588032 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
TPM4-207ENST00000588032 RPGRQ92834 1020 aaKnown RBP12.93□□□□□ -0.34
TPM4-207ENST00000588032 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
TPM4-207ENST00000588032 CHD4Q14839 1912 aa12.93□□□□□ -0.34
TPM4-207ENST00000588032 ANKRD31Q8N7Z5 1873 aa12.93□□□□□ -0.34
TPM4-207ENST00000588032 DLEC1Q9Y238 1755 aa12.92□□□□□ -0.34
TPM4-207ENST00000588032 FLIIQ13045 1269 aa12.92□□□□□ -0.34
TPM4-207ENST00000588032 PRPF40BQ6NWY9 871 aaKnown RBP12.92□□□□□ -0.34
TPM4-207ENST00000588032 TRMT2AQ8IZ69 625 aaKnown RBP12.92□□□□□ -0.34
TPM4-207ENST00000588032 RBM17Q96I25 401 aaKnown RBP12.92□□□□□ -0.34
TPM4-207ENST00000588032 CRAMP1Q96RY5 1269 aa12.92□□□□□ -0.34
TPM4-207ENST00000588032 MYD88Q99836 296 aa12.92□□□□□ -0.34
TPM4-207ENST00000588032 ARFGEF1Q9Y6D6 1849 aa12.92□□□□□ -0.34
TPM4-207ENST00000588032 ABCC12Q96J65 1359 aa12.92□□□□□ -0.34
TPM4-207ENST00000588032 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
TPM4-207ENST00000588032 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
TPM4-207ENST00000588032 G2E3Q7L622 706 aa12.91□□□□□ -0.34
TPM4-207ENST00000588032 ZBTB38Q8NAP3 1195 aaPredicted RBP12.91□□□□□ -0.34
TPM4-207ENST00000588032 CWC25Q9NXE8 425 aaPredicted RBP12.91□□□□□ -0.34
TPM4-207ENST00000588032 ANKRD36CQ5JPF3 1778 aa12.9□□□□□ -0.34
TPM4-207ENST00000588032 C21orf2O43822 256 aa12.9□□□□□ -0.34
TPM4-207ENST00000588032 GRIPAP1Q4V328 841 aa12.9□□□□□ -0.34
TPM4-207ENST00000588032 CC2D2BQ6DHV5 1058 aa12.9□□□□□ -0.34
TPM4-207ENST00000588032 C7orf43Q8WVR3 580 aa12.9□□□□□ -0.34
TPM4-207ENST00000588032 CDCA7LQ96GN5 454 aa12.9□□□□□ -0.34
TPM4-207ENST00000588032 PCCAP05165 728 aaPredicted RBP12.89□□□□□ -0.35
TPM4-207ENST00000588032 HCLS1P14317 486 aaPredicted RBP12.89□□□□□ -0.35
TPM4-207ENST00000588032 RTKN2Q8IZC4 609 aa12.89□□□□□ -0.35
TPM4-207ENST00000588032 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
TPM4-207ENST00000588032 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
TPM4-207ENST00000588032 FAM89AQ96GI7 184 aa12.89□□□□□ -0.35
TPM4-207ENST00000588032 ADCY9O60503 1353 aa12.89□□□□□ -0.35
TPM4-207ENST00000588032 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
TPM4-207ENST00000588032 IRS4O14654 1257 aaPredicted RBP12.88□□□□□ -0.35
TPM4-207ENST00000588032 BBOX1O75936 387 aa12.88□□□□□ -0.35
TPM4-207ENST00000588032 LMNB1P20700 586 aa12.88□□□□□ -0.35
TPM4-207ENST00000588032 SF3B3Q15393 1217 aaKnown RBP12.88□□□□□ -0.35
TPM4-207ENST00000588032 ALDH1L2Q3SY69 923 aa12.88□□□□□ -0.35
TPM4-207ENST00000588032 CCDC93Q567U6 631 aa12.88□□□□□ -0.35
TPM4-207ENST00000588032 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
TPM4-207ENST00000588032 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
TPM4-207ENST00000588032 LINS1Q8NG48 757 aa12.88□□□□□ -0.35
TPM4-207ENST00000588032 TMX4Q9H1E5 349 aaPredicted RBP12.88□□□□□ -0.35
TPM4-207ENST00000588032 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
TPM4-207ENST00000588032 CACNA1FO60840 1977 aa12.88□□□□□ -0.35
TPM4-207ENST00000588032 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
TPM4-207ENST00000588032 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
TPM4-207ENST00000588032 NEURL1BA8MQ27 555 aa12.87□□□□□ -0.35
TPM4-207ENST00000588032 IGKV5-2P06315 115 aa12.87□□□□□ -0.35
TPM4-207ENST00000588032 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
TPM4-207ENST00000588032 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
TPM4-207ENST00000588032 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
TPM4-207ENST00000588032 TAOK3Q9H2K8 898 aa12.87□□□□□ -0.35
TPM4-207ENST00000588032 CDHR2Q9BYE9 1310 aa12.87□□□□□ -0.35
TPM4-207ENST00000588032 ZC3H4Q9UPT8 1303 aaKnown RBP12.87□□□□□ -0.35
TPM4-207ENST00000588032 NFKBIEO00221 500 aa12.86□□□□□ -0.35
TPM4-207ENST00000588032 PDE8AO60658 829 aa12.86□□□□□ -0.35
TPM4-207ENST00000588032 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
TPM4-207ENST00000588032 RNF181Q9P0P0 153 aa12.86□□□□□ -0.35
TPM4-207ENST00000588032 H7C1W4 665 aa12.85□□□□□ -0.35
TPM4-207ENST00000588032 PPEF1O14829 653 aaPredicted RBP12.85□□□□□ -0.35
TPM4-207ENST00000588032 RASSF7Q02833 373 aa12.85□□□□□ -0.35
TPM4-207ENST00000588032 GRAPQ13588 217 aa12.85□□□□□ -0.35
TPM4-207ENST00000588032 GCKRQ14397 625 aa12.85□□□□□ -0.35
TPM4-207ENST00000588032 CWF19L2Q2TBE0 894 aaKnown RBP12.85□□□□□ -0.35
TPM4-207ENST00000588032 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
TPM4-207ENST00000588032 MRPL50Q8N5N7 158 aaKnown RBP12.85□□□□□ -0.35
TPM4-207ENST00000588032 GRAPLQ8TC17 118 aaPredicted RBP12.85□□□□□ -0.35
TPM4-207ENST00000588032 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
TPM4-207ENST00000588032 ATP6V0A2Q9Y487 856 aa12.85□□□□□ -0.35
TPM4-207ENST00000588032 TNRC6CQ9HCJ0 1690 aaKnown RBP12.85□□□□□ -0.35
TPM4-207ENST00000588032 SLX4Q8IY92 1834 aa12.85□□□□□ -0.35
TPM4-207ENST00000588032 PTPRCP08575 1304 aa12.85□□□□□ -0.35
TPM4-207ENST00000588032 FKBP4Q02790 459 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms