RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 ALDH1B1P30837 517 aa25.89■■□□□ 1.74
PTBP1-208ENST00000585956 EPHX2P34913 555 aa25.89■■□□□ 1.74
PTBP1-208ENST00000585956 PDIA6Q15084 440 aa25.89■■□□□ 1.74
PTBP1-208ENST00000585956 MAP1SQ66K74 1059 aaPredicted RBP25.89■■□□□ 1.74
PTBP1-208ENST00000585956 ZNF34Q8IZ26 560 aa25.89■■□□□ 1.74
PTBP1-208ENST00000585956 PNISRQ8TF01 805 aaKnown RBP25.89■■□□□ 1.74
PTBP1-208ENST00000585956 HACL1Q9UJ83 578 aa25.89■■□□□ 1.74
PTBP1-208ENST00000585956 TCERG1O14776 1098 aaKnown RBP25.88■■□□□ 1.73
PTBP1-208ENST00000585956 PSMD1Q99460 953 aa25.88■■□□□ 1.73
PTBP1-208ENST00000585956 FOXN1O15353 648 aa25.87■■□□□ 1.73
PTBP1-208ENST00000585956 HOXA10P31260 410 aaPredicted RBP25.87■■□□□ 1.73
PTBP1-208ENST00000585956 VEGFBP49765 207 aa25.87■■□□□ 1.73
PTBP1-208ENST00000585956 FMR1Q06787 632 aaKnown RBP eCLIP25.87■■□□□ 1.73
PTBP1-208ENST00000585956 KIF6Q6ZMV9 814 aa25.87■■□□□ 1.73
PTBP1-208ENST00000585956 IBTKQ9P2D0 1353 aaPredicted RBP25.86■■□□□ 1.73
PTBP1-208ENST00000585956 NYXQ9GZU5 481 aa25.86■■□□□ 1.73
PTBP1-208ENST00000585956 LAMB2P55268 1798 aa25.84■■□□□ 1.73
PTBP1-208ENST00000585956 GIGYF2Q6Y7W6 1299 aaKnown RBP25.84■■□□□ 1.73
PTBP1-208ENST00000585956 CLEC11AQ9Y240 323 aa25.84■■□□□ 1.73
PTBP1-208ENST00000585956 GPC2Q8N158 579 aa25.83■■□□□ 1.73
PTBP1-208ENST00000585956 RPGRQ92834 1020 aaKnown RBP25.83■■□□□ 1.73
PTBP1-208ENST00000585956 GJA3Q9Y6H8 435 aa25.83■■□□□ 1.73
PTBP1-208ENST00000585956 TMEM88BA6NKF7 163 aa25.82■■□□□ 1.72
PTBP1-208ENST00000585956 PPEF1O14829 653 aaPredicted RBP25.82■■□□□ 1.72
PTBP1-208ENST00000585956 SCNN1DP51172 638 aa25.82■■□□□ 1.72
PTBP1-208ENST00000585956 CNTROBQ8N137 903 aa25.82■■□□□ 1.72
PTBP1-208ENST00000585956 TSPYL4Q9UJ04 414 aa25.82■■□□□ 1.72
PTBP1-208ENST00000585956 EIF2S2P20042 333 aaKnown RBP25.81■■□□□ 1.72
PTBP1-208ENST00000585956 EPS15P42566 896 aa25.81■■□□□ 1.72
PTBP1-208ENST00000585956 KRT24Q2M2I5 525 aa25.81■■□□□ 1.72
PTBP1-208ENST00000585956 NECTIN2Q92692 538 aa25.81■■□□□ 1.72
PTBP1-208ENST00000585956 ZNF428Q96B54 188 aa25.81■■□□□ 1.72
PTBP1-208ENST00000585956 TAF1P21675 1872 aa25.81■■□□□ 1.72
PTBP1-208ENST00000585956 CRAMP1Q96RY5 1269 aa25.8■■□□□ 1.72
PTBP1-208ENST00000585956 MAPK8IP3Q9UPT6 1336 aa25.8■■□□□ 1.72
PTBP1-208ENST00000585956 ANKRD36CQ5JPF3 1778 aa25.79■■□□□ 1.72
PTBP1-208ENST00000585956 NEFMP07197 916 aa25.79■■□□□ 1.72
PTBP1-208ENST00000585956 RIPK4P57078 832 aa25.78■■□□□ 1.72
PTBP1-208ENST00000585956 RBM17Q96I25 401 aaKnown RBP25.78■■□□□ 1.72
PTBP1-208ENST00000585956 ABCC4O15439 1325 aa25.78■■□□□ 1.72
PTBP1-208ENST00000585956 ERBB4Q15303 1308 aa25.78■■□□□ 1.72
PTBP1-208ENST00000585956 COL4A1P02462 1669 aa25.77■■□□□ 1.72
PTBP1-208ENST00000585956 AOC3Q16853 763 aa25.77■■□□□ 1.72
PTBP1-208ENST00000585956 LARGE2Q8N3Y3 721 aa25.77■■□□□ 1.72
PTBP1-208ENST00000585956 JDP2Q8WYK2 163 aa25.77■■□□□ 1.72
PTBP1-208ENST00000585956 CC2D2BQ6DHV5 1058 aa25.76■■□□□ 1.71
PTBP1-208ENST00000585956 PNMA8AQ86V59 439 aaPredicted RBP25.76■■□□□ 1.71
PTBP1-208ENST00000585956 RASSF10A6NK89 507 aa25.75■■□□□ 1.71
PTBP1-208ENST00000585956 TMPOP42166 694 aaKnown RBP25.75■■□□□ 1.71
PTBP1-208ENST00000585956 EIF6P56537 245 aaKnown RBP25.75■■□□□ 1.71
PTBP1-208ENST00000585956 TRAF5O00463 557 aa25.74■■□□□ 1.71
PTBP1-208ENST00000585956 HCLS1P14317 486 aaPredicted RBP25.74■■□□□ 1.71
PTBP1-208ENST00000585956 SLC10A5Q5PT55 438 aa25.74■■□□□ 1.71
PTBP1-208ENST00000585956 CCDC146Q8IYE0 955 aa25.74■■□□□ 1.71
PTBP1-208ENST00000585956 XAGE3Q8WTP9 111 aa25.74■■□□□ 1.71
PTBP1-208ENST00000585956 UTP14AQ9BVJ6 771 aaKnown RBP25.74■■□□□ 1.71
PTBP1-208ENST00000585956 WBP1LQ9NX94 342 aa25.74■■□□□ 1.71
PTBP1-208ENST00000585956 AIMP1Q12904 312 aaKnown RBP25.73■■□□□ 1.71
PTBP1-208ENST00000585956 COPS6Q7L5N1 327 aa25.73■■□□□ 1.71
PTBP1-208ENST00000585956 PPP1R42Q7Z4L9 355 aa25.73■■□□□ 1.71
PTBP1-208ENST00000585956 DDX21Q9NR30 783 aaKnown RBP eCLIP25.73■■□□□ 1.71
PTBP1-208ENST00000585956 ATP6V0A2Q9Y487 856 aa25.73■■□□□ 1.71
PTBP1-208ENST00000585956 PPIP5K2O43314 1243 aa25.72■■□□□ 1.71
PTBP1-208ENST00000585956 PARP10Q53GL7 1025 aa25.72■■□□□ 1.71
PTBP1-208ENST00000585956 NLRP10Q86W26 655 aa25.72■■□□□ 1.71
PTBP1-208ENST00000585956 DUOX1Q9NRD9 1551 aa25.72■■□□□ 1.71
PTBP1-208ENST00000585956 NLRP3Q96P20 1036 aa25.71■■□□□ 1.71
PTBP1-208ENST00000585956 DEFB115Q30KQ5 88 aa25.7■■□□□ 1.7
PTBP1-208ENST00000585956 CST9Q5W186 159 aa25.7■■□□□ 1.7
PTBP1-208ENST00000585956 NIM1KQ8IY84 436 aa25.7■■□□□ 1.7
PTBP1-208ENST00000585956 DDX60Q8IY21 1712 aaKnown RBP25.7■■□□□ 1.7
PTBP1-208ENST00000585956 THSD7BQ9C0I4 1608 aa25.7■■□□□ 1.7
PTBP1-208ENST00000585956 WDR33Q9C0J8 1336 aaKnown RBP25.69■■□□□ 1.7
PTBP1-208ENST00000585956 LBX1P52954 281 aa25.69■■□□□ 1.7
PTBP1-208ENST00000585956 CXCL9Q07325 125 aa25.69■■□□□ 1.7
PTBP1-208ENST00000585956 TRIM35Q9UPQ4 493 aa25.69■■□□□ 1.7
PTBP1-208ENST00000585956 TRPM7Q96QT4 1865 aa25.68■■□□□ 1.7
PTBP1-208ENST00000585956 SHTN1A0MZ66 631 aa25.68■■□□□ 1.7
PTBP1-208ENST00000585956 LMOD1P29536 600 aaPredicted RBP25.68■■□□□ 1.7
PTBP1-208ENST00000585956 NEUROD2Q15784 382 aa25.68■■□□□ 1.7
PTBP1-208ENST00000585956 RTFDC1Q9BY42 306 aaPredicted RBP25.68■■□□□ 1.7
PTBP1-208ENST00000585956 PNNQ9H307 717 aaKnown RBP25.68■■□□□ 1.7
PTBP1-208ENST00000585956 PRDM10Q9NQV6 1147 aa25.68■■□□□ 1.7
PTBP1-208ENST00000585956 ABT1Q9ULW3 272 aaKnown RBP25.68■■□□□ 1.7
PTBP1-208ENST00000585956 HSPA8P11142 646 aaKnown RBP25.67■■□□□ 1.7
PTBP1-208ENST00000585956 CTCFP49711 727 aaPredicted RBP25.67■■□□□ 1.7
PTBP1-208ENST00000585956 CHL1O00533 1208 aa25.66■■□□□ 1.7
PTBP1-208ENST00000585956 GMPSP49915 693 aaPredicted RBP25.66■■□□□ 1.7
PTBP1-208ENST00000585956 TCIRG1Q13488 830 aa25.66■■□□□ 1.7
PTBP1-208ENST00000585956 GPRC5DQ9NZD1 345 aa25.66■■□□□ 1.7
PTBP1-208ENST00000585956 CHPF2Q9P2E5 772 aa25.66■■□□□ 1.7
PTBP1-208ENST00000585956 LRRC37AA6NMS7 1700 aa25.66■■□□□ 1.7
PTBP1-208ENST00000585956 GRIPAP1Q4V328 841 aa25.65■■□□□ 1.7
PTBP1-208ENST00000585956 CYP4F22Q6NT55 531 aa25.65■■□□□ 1.7
PTBP1-208ENST00000585956 BABAM1Q9NWV8 329 aa25.65■■□□□ 1.7
PTBP1-208ENST00000585956 YDJCA8MPS7 323 aa25.64■■□□□ 1.7
PTBP1-208ENST00000585956 HIRAP54198 1017 aaPredicted RBP25.64■■□□□ 1.7
PTBP1-208ENST00000585956 USP50Q70EL3 339 aaPredicted RBP25.64■■□□□ 1.7
PTBP1-208ENST00000585956 ZNRF3Q9ULT6 936 aa25.64■■□□□ 1.7
PTBP1-208ENST00000585956 RAD17O75943 681 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms