RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 FKBP4Q02790 459 aaKnown RBP eCLIP23.62■■□□□ 1.37
HMG20B-216ENST00000585900 UTP14AQ9BVJ6 771 aaKnown RBP23.62■■□□□ 1.37
HMG20B-216ENST00000585900 CHPF2Q9P2E5 772 aa23.62■■□□□ 1.37
HMG20B-216ENST00000585900 CCDC88AQ3V6T2 1871 aa23.62■■□□□ 1.37
HMG20B-216ENST00000585900 RNF123Q5XPI4 1314 aa23.61■■□□□ 1.37
HMG20B-216ENST00000585900 IFT57Q9NWB7 429 aa23.61■■□□□ 1.37
HMG20B-216ENST00000585900 CEP350Q5VT06 3117 aa23.6■■□□□ 1.37
HMG20B-216ENST00000585900 GNAI1P63096 354 aa23.6■■□□□ 1.37
HMG20B-216ENST00000585900 SMC1BQ8NDV3 1235 aa23.6■■□□□ 1.37
HMG20B-216ENST00000585900 MBIPQ9NS73 344 aa23.6■■□□□ 1.37
HMG20B-216ENST00000585900 DBF4Q9UBU7 674 aaPredicted RBP23.6■■□□□ 1.37
HMG20B-216ENST00000585900 DUSP27Q5VZP5 1158 aa23.59■■□□□ 1.37
HMG20B-216ENST00000585900 RBM17Q96I25 401 aaKnown RBP23.59■■□□□ 1.37
HMG20B-216ENST00000585900 NLRP3Q96P20 1036 aa23.59■■□□□ 1.37
HMG20B-216ENST00000585900 DICER1Q9UPY3 1922 aaKnown RBP23.59■■□□□ 1.37
HMG20B-216ENST00000585900 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
HMG20B-216ENST00000585900 CC2D2BQ6DHV5 1058 aa23.58■■□□□ 1.37
HMG20B-216ENST00000585900 ZNF316A6NFI3 1004 aaPredicted RBP23.57■■□□□ 1.36
HMG20B-216ENST00000585900 ZNF277Q9NRM2 450 aaPredicted RBP23.57■■□□□ 1.36
HMG20B-216ENST00000585900 HYPKQ9NX55 129 aa23.57■■□□□ 1.36
HMG20B-216ENST00000585900 ZNF853P0CG23 659 aa23.56■■□□□ 1.36
HMG20B-216ENST00000585900 TCIRG1Q13488 830 aa23.56■■□□□ 1.36
HMG20B-216ENST00000585900 OLFM4Q6UX06 510 aa23.56■■□□□ 1.36
HMG20B-216ENST00000585900 NLRP10Q86W26 655 aa23.56■■□□□ 1.36
HMG20B-216ENST00000585900 CRAMP1Q96RY5 1269 aa23.56■■□□□ 1.36
HMG20B-216ENST00000585900 TMX4Q9H1E5 349 aaPredicted RBP23.56■■□□□ 1.36
HMG20B-216ENST00000585900 ANKRD36CQ5JPF3 1778 aa23.55■■□□□ 1.36
HMG20B-216ENST00000585900 ANP32CO43423 234 aa23.55■■□□□ 1.36
HMG20B-216ENST00000585900 GRIPAP1Q4V328 841 aa23.55■■□□□ 1.36
HMG20B-216ENST00000585900 PLBD2Q8NHP8 589 aa23.55■■□□□ 1.36
HMG20B-216ENST00000585900 WDR90Q96KV7 1748 aa23.55■■□□□ 1.36
HMG20B-216ENST00000585900 PPEF1O14829 653 aaPredicted RBP23.54■■□□□ 1.36
HMG20B-216ENST00000585900 PSMD1Q99460 953 aa23.54■■□□□ 1.36
HMG20B-216ENST00000585900 TRMT112Q9UI30 125 aaKnown RBP23.54■■□□□ 1.36
HMG20B-216ENST00000585900 IARSP41252 1262 aaKnown RBP23.53■■□□□ 1.36
HMG20B-216ENST00000585900 SLC10A5Q5PT55 438 aa23.53■■□□□ 1.36
HMG20B-216ENST00000585900 ANKRD13DQ6ZTN6 518 aa23.53■■□□□ 1.36
HMG20B-216ENST00000585900 SYNE4Q8N205 404 aa23.53■■□□□ 1.36
HMG20B-216ENST00000585900 CHMP4AQ9BY43 222 aa23.53■■□□□ 1.36
HMG20B-216ENST00000585900 SH3TC1Q8TE82 1336 aa23.53■■□□□ 1.36
HMG20B-216ENST00000585900 DDNO94850 711 aaPredicted RBP23.52■■□□□ 1.36
HMG20B-216ENST00000585900 IQCA1LA6NCM1 817 aa23.51■■□□□ 1.35
HMG20B-216ENST00000585900 GOLGA2Q08379 1002 aa23.51■■□□□ 1.35
HMG20B-216ENST00000585900 C3orf67Q6ZVT6 689 aa23.51■■□□□ 1.35
HMG20B-216ENST00000585900 JDP2Q8WYK2 163 aa23.51■■□□□ 1.35
HMG20B-216ENST00000585900 MRS2Q9HD23 443 aa23.51■■□□□ 1.35
HMG20B-216ENST00000585900 CCDC184Q52MB2 194 aa23.5■■□□□ 1.35
HMG20B-216ENST00000585900 ELL2O00472 640 aaPredicted RBP23.49■■□□□ 1.35
HMG20B-216ENST00000585900 TCERG1O14776 1098 aaKnown RBP23.49■■□□□ 1.35
HMG20B-216ENST00000585900 HCLS1P14317 486 aaPredicted RBP23.49■■□□□ 1.35
HMG20B-216ENST00000585900 SNED1Q8TER0 1413 aa23.49■■□□□ 1.35
HMG20B-216ENST00000585900 POTECB2RU33 542 aa23.48■■□□□ 1.35
HMG20B-216ENST00000585900 DDX46Q7L014 1031 aaKnown RBP23.48■■□□□ 1.35
HMG20B-216ENST00000585900 ABCC4O15439 1325 aa23.48■■□□□ 1.35
HMG20B-216ENST00000585900 CCDC27Q2M243 656 aa23.47■■□□□ 1.35
HMG20B-216ENST00000585900 RIC3Q7Z5B4 369 aa23.47■■□□□ 1.35
HMG20B-216ENST00000585900 L3MBTL3Q96JM7 780 aaPredicted RBP23.47■■□□□ 1.35
HMG20B-216ENST00000585900 ZNF541Q9H0D2 1346 aa23.47■■□□□ 1.35
HMG20B-216ENST00000585900 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
HMG20B-216ENST00000585900 ISCA1Q9BUE6 129 aa23.46■■□□□ 1.35
HMG20B-216ENST00000585900 ATP6V0A2Q9Y487 856 aa23.46■■□□□ 1.35
HMG20B-216ENST00000585900 ATP5J2-PTCD1G3V325 749 aa23.45■■□□□ 1.34
HMG20B-216ENST00000585900 BBOX1O75936 387 aa23.45■■□□□ 1.34
HMG20B-216ENST00000585900 EIF6P56537 245 aaKnown RBP23.45■■□□□ 1.34
HMG20B-216ENST00000585900 LARGE2Q8N3Y3 721 aa23.45■■□□□ 1.34
HMG20B-216ENST00000585900 C8orf58Q8NAV2 365 aa23.45■■□□□ 1.34
HMG20B-216ENST00000585900 FZD9O00144 591 aa23.44■■□□□ 1.34
HMG20B-216ENST00000585900 DDX58O95786 925 aaKnown RBP23.44■■□□□ 1.34
HMG20B-216ENST00000585900 SUPT20HQ8NEM7 779 aa23.44■■□□□ 1.34
HMG20B-216ENST00000585900 GRAPQ13588 217 aa23.43■■□□□ 1.34
HMG20B-216ENST00000585900 CHADLQ6NUI6 762 aa23.43■■□□□ 1.34
HMG20B-216ENST00000585900 WWC1Q8IX03 1113 aa23.43■■□□□ 1.34
HMG20B-216ENST00000585900 GPC2Q8N158 579 aa23.43■■□□□ 1.34
HMG20B-216ENST00000585900 GRAPLQ8TC17 118 aaPredicted RBP23.43■■□□□ 1.34
HMG20B-216ENST00000585900 ZNF428Q96B54 188 aa23.43■■□□□ 1.34
HMG20B-216ENST00000585900 FAM89AQ96GI7 184 aa23.43■■□□□ 1.34
HMG20B-216ENST00000585900 TRIM28Q13263 835 aaKnown RBP23.42■■□□□ 1.34
HMG20B-216ENST00000585900 NIM1KQ8IY84 436 aa23.42■■□□□ 1.34
HMG20B-216ENST00000585900 TSR2Q969E8 191 aaKnown RBP23.42■■□□□ 1.34
HMG20B-216ENST00000585900 TAF1DQ9H5J8 278 aaPredicted RBP23.42■■□□□ 1.34
HMG20B-216ENST00000585900 PHAXQ9H814 394 aaKnown RBP23.42■■□□□ 1.34
HMG20B-216ENST00000585900 HACL1Q9UJ83 578 aa23.42■■□□□ 1.34
HMG20B-216ENST00000585900 SCN4AP35499 1836 aa23.41■■□□□ 1.34
HMG20B-216ENST00000585900 PPIP5K2O43314 1243 aa23.41■■□□□ 1.34
HMG20B-216ENST00000585900 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
HMG20B-216ENST00000585900 HTRA3P83110 453 aa23.41■■□□□ 1.34
HMG20B-216ENST00000585900 NCBP3Q53F19 620 aaKnown RBP23.41■■□□□ 1.34
HMG20B-216ENST00000585900 DPP8Q6V1X1 898 aaPredicted RBP23.41■■□□□ 1.34
HMG20B-216ENST00000585900 TMC4Q7Z404 712 aa23.41■■□□□ 1.34
HMG20B-216ENST00000585900 SP8Q8IXZ3 490 aa23.41■■□□□ 1.34
HMG20B-216ENST00000585900 DNAJC5GQ8N7S2 189 aa23.41■■□□□ 1.34
HMG20B-216ENST00000585900 STK31Q9BXU1 1019 aa23.41■■□□□ 1.34
HMG20B-216ENST00000585900 VPS33BQ9H267 617 aa23.41■■□□□ 1.34
HMG20B-216ENST00000585900 LAMB2P55268 1798 aa23.4■■□□□ 1.34
HMG20B-216ENST00000585900 IL16Q14005 1332 aa23.4■■□□□ 1.34
HMG20B-216ENST00000585900 LDHDQ86WU2 507 aa23.4■■□□□ 1.34
HMG20B-216ENST00000585900 EAPPQ56P03 285 aaPredicted RBP23.39■■□□□ 1.33
HMG20B-216ENST00000585900 RTL5Q5HYW3 569 aaPredicted RBP23.39■■□□□ 1.33
HMG20B-216ENST00000585900 SLC51AQ86UW1 340 aa23.39■■□□□ 1.33
HMG20B-216ENST00000585900 MPNDQ8N594 471 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms