RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ARID4AP29374 1257 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-203ENST00000585448 MAP2K3P46734 347 aa8.36□□□□□ -1.07
SMAD4-203ENST00000585448 TXNDC2Q86VQ3 553 aa8.36□□□□□ -1.07
SMAD4-203ENST00000585448 BRD7Q9NPI1 651 aa8.36□□□□□ -1.07
SMAD4-203ENST00000585448 MARK1Q9P0L2 795 aa8.36□□□□□ -1.07
SMAD4-203ENST00000585448 KHNYNO15037 678 aaKnown RBP8.35□□□□□ -1.07
SMAD4-203ENST00000585448 INPP5BP32019 993 aa8.35□□□□□ -1.07
SMAD4-203ENST00000585448 ABTB2Q8N961 1025 aa8.35□□□□□ -1.07
SMAD4-203ENST00000585448 IFT43Q96FT9 208 aa8.35□□□□□ -1.07
SMAD4-203ENST00000585448 KLK14Q9P0G3 267 aa8.35□□□□□ -1.07
SMAD4-203ENST00000585448 STIM2Q9P246 746 aa8.35□□□□□ -1.07
SMAD4-203ENST00000585448 SEPT3Q9UH03 358 aa8.35□□□□□ -1.07
SMAD4-203ENST00000585448 GNEQ9Y223 722 aaKnown RBP8.35□□□□□ -1.07
SMAD4-203ENST00000585448 DCDC2BA2VCK2 349 aa8.34□□□□□ -1.07
SMAD4-203ENST00000585448 EPB42P16452 691 aa8.34□□□□□ -1.07
SMAD4-203ENST00000585448 ARSDP51689 593 aa8.34□□□□□ -1.07
SMAD4-203ENST00000585448 CEP63Q96MT8 703 aa8.34□□□□□ -1.07
SMAD4-203ENST00000585448 CNTNAP3BQ96NU0 1288 aa8.34□□□□□ -1.07
SMAD4-203ENST00000585448 CNTNAP3Q9BZ76 1288 aa8.34□□□□□ -1.07
SMAD4-203ENST00000585448 IGF1RP08069 1367 aa8.34□□□□□ -1.07
SMAD4-203ENST00000585448 MICAL2O94851 1124 aa8.33□□□□□ -1.08
SMAD4-203ENST00000585448 IDH3AP50213 366 aa8.33□□□□□ -1.08
SMAD4-203ENST00000585448 INSM1Q01101 510 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-203ENST00000585448 SF3B2Q13435 895 aaKnown RBP8.33□□□□□ -1.08
SMAD4-203ENST00000585448 AAMPQ13685 434 aa8.33□□□□□ -1.08
SMAD4-203ENST00000585448 NAA30Q147X3 362 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-203ENST00000585448 ETFBKMTQ8IXQ9 262 aa8.33□□□□□ -1.08
SMAD4-203ENST00000585448 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
SMAD4-203ENST00000585448 ADAMTS2O95450 1211 aa8.32□□□□□ -1.08
SMAD4-203ENST00000585448 ARAFP10398 606 aa8.32□□□□□ -1.08
SMAD4-203ENST00000585448 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-203ENST00000585448 CTBSQ01459 385 aa8.32□□□□□ -1.08
SMAD4-203ENST00000585448 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
SMAD4-203ENST00000585448 TREML1Q86YW5 311 aa8.32□□□□□ -1.08
SMAD4-203ENST00000585448 GTF3C2Q8WUA4 911 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-203ENST00000585448 STRN4Q9NRL3 753 aa8.32□□□□□ -1.08
SMAD4-203ENST00000585448 FAM13BQ9NYF5 915 aa8.32□□□□□ -1.08
SMAD4-203ENST00000585448 KCNH4Q9UQ05 1017 aa8.32□□□□□ -1.08
SMAD4-203ENST00000585448 C2CD2LO14523 706 aa8.31□□□□□ -1.08
SMAD4-203ENST00000585448 EGFRP00533 1210 aa8.31□□□□□ -1.08
SMAD4-203ENST00000585448 GDF2Q9UK05 429 aaPredicted RBP8.31□□□□□ -1.08
SMAD4-203ENST00000585448 OPLAHO14841 1288 aa8.3□□□□□ -1.08
SMAD4-203ENST00000585448 BMP4P12644 408 aa8.3□□□□□ -1.08
SMAD4-203ENST00000585448 CD33P20138 364 aa8.3□□□□□ -1.08
SMAD4-203ENST00000585448 GRNP28799 593 aaKnown RBP8.3□□□□□ -1.08
SMAD4-203ENST00000585448 SCNN1AP37088 669 aa8.3□□□□□ -1.08
SMAD4-203ENST00000585448 FKBP4Q02790 459 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMAD4-203ENST00000585448 KCNA1Q09470 495 aa8.3□□□□□ -1.08
SMAD4-203ENST00000585448 SFSWAPQ12872 951 aaKnown RBP8.3□□□□□ -1.08
SMAD4-203ENST00000585448 ZNF468Q5VIY5 522 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-203ENST00000585448 DNMT3AQ9Y6K1 912 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-203ENST00000585448 ALKBH2Q6NS38 261 aa8.29□□□□□ -1.08
SMAD4-203ENST00000585448 OXCT2Q9BYC2 517 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-203ENST00000585448 LOC105371045A0A1W2PR82 267 aa8.28□□□□□ -1.08
SMAD4-203ENST00000585448 ICMTO60725 284 aa8.28□□□□□ -1.08
SMAD4-203ENST00000585448 SIN3BO75182 1162 aa8.28□□□□□ -1.08
SMAD4-203ENST00000585448 FAM13AO94988 1023 aa8.28□□□□□ -1.08
SMAD4-203ENST00000585448 RBM10P98175 930 aaKnown RBP8.28□□□□□ -1.08
SMAD4-203ENST00000585448 FAM26DQ5JW98 314 aa8.28□□□□□ -1.08
SMAD4-203ENST00000585448 SLCO4C1Q6ZQN7 724 aa8.28□□□□□ -1.08
SMAD4-203ENST00000585448 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
SMAD4-203ENST00000585448 MDFIQ99750 246 aa8.28□□□□□ -1.08
SMAD4-203ENST00000585448 ZAP70P43403 619 aa8.27□□□□□ -1.09
SMAD4-203ENST00000585448 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
SMAD4-203ENST00000585448 ZSCAN1Q8NBB4 408 aa8.27□□□□□ -1.09
SMAD4-203ENST00000585448 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
SMAD4-203ENST00000585448 GSX2Q9BZM3 304 aa8.27□□□□□ -1.09
SMAD4-203ENST00000585448 RPLP1P05386 114 aaKnown RBP8.26□□□□□ -1.09
SMAD4-203ENST00000585448 ADH6P28332 368 aa8.26□□□□□ -1.09
SMAD4-203ENST00000585448 CCINQ13939 588 aa8.26□□□□□ -1.09
SMAD4-203ENST00000585448 NOM1Q5C9Z4 860 aaKnown RBP8.26□□□□□ -1.09
SMAD4-203ENST00000585448 ZNF385CQ66K41 422 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-203ENST00000585448 HOMEZQ8IX15 550 aa8.26□□□□□ -1.09
SMAD4-203ENST00000585448 ACDQ96AP0 544 aa8.26□□□□□ -1.09
SMAD4-203ENST00000585448 CDK11AQ9UQ88 783 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-203ENST00000585448 RTCBQ9Y3I0 505 aaKnown RBP8.26□□□□□ -1.09
SMAD4-203ENST00000585448 KCNMB2Q9Y691 235 aa8.26□□□□□ -1.09
SMAD4-203ENST00000585448 ZBTB39O15060 712 aa8.25□□□□□ -1.09
SMAD4-203ENST00000585448 BCRP11274 1271 aa8.25□□□□□ -1.09
SMAD4-203ENST00000585448 MPSTP25325 297 aa8.25□□□□□ -1.09
SMAD4-203ENST00000585448 EIF1AXP47813 144 aaKnown RBP8.25□□□□□ -1.09
SMAD4-203ENST00000585448 SERPINB4P48594 390 aa8.25□□□□□ -1.09
SMAD4-203ENST00000585448 KCTD17Q8N5Z5 321 aa8.25□□□□□ -1.09
SMAD4-203ENST00000585448 PIK3R5Q8WYR1 880 aa8.25□□□□□ -1.09
SMAD4-203ENST00000585448 SLC30A3Q99726 388 aa8.25□□□□□ -1.09
SMAD4-203ENST00000585448 ADARB2-AS1A8MUL3 147 aa8.24□□□□□ -1.09
SMAD4-203ENST00000585448 OIP5O43482 229 aa8.24□□□□□ -1.09
SMAD4-203ENST00000585448 MAP3K6O95382 1288 aa8.24□□□□□ -1.09
SMAD4-203ENST00000585448 CELA2BP08218 269 aaPredicted RBP8.24□□□□□ -1.09
SMAD4-203ENST00000585448 ECM1Q16610 540 aa8.24□□□□□ -1.09
SMAD4-203ENST00000585448 USP35Q9P2H5 1018 aa8.24□□□□□ -1.09
SMAD4-203ENST00000585448 KLF15Q9UIH9 416 aa8.24□□□□□ -1.09
SMAD4-203ENST00000585448 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
SMAD4-203ENST00000585448 NOP58Q9Y2X3 529 aaKnown RBP8.24□□□□□ -1.09
SMAD4-203ENST00000585448 ARHGEF15O94989 841 aa8.23□□□□□ -1.09
SMAD4-203ENST00000585448 HOXD8P13378 290 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-203ENST00000585448 MZF1P28698 734 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-203ENST00000585448 LYPD4Q6UWN0 246 aa8.23□□□□□ -1.09
SMAD4-203ENST00000585448 GGA1Q9UJY5 639 aa8.23□□□□□ -1.09
SMAD4-203ENST00000585448 RRP9O43818 475 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms