RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 KRT24Q2M2I5 525 aa17.48■□□□□ 0.39
PRKCSH-201ENST00000585325 OLFM4Q6UX06 510 aa17.48■□□□□ 0.39
PRKCSH-201ENST00000585325 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
PRKCSH-201ENST00000585325 ZNF34Q8IZ26 560 aa17.48■□□□□ 0.39
PRKCSH-201ENST00000585325 PRDM10Q9NQV6 1147 aa17.48■□□□□ 0.39
PRKCSH-201ENST00000585325 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
PRKCSH-201ENST00000585325 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-201ENST00000585325 CRY2Q49AN0 593 aa17.47■□□□□ 0.39
PRKCSH-201ENST00000585325 CHADLQ6NUI6 762 aa17.47■□□□□ 0.39
PRKCSH-201ENST00000585325 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
PRKCSH-201ENST00000585325 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
PRKCSH-201ENST00000585325 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
PRKCSH-201ENST00000585325 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
PRKCSH-201ENST00000585325 NTSR2O95665 410 aa17.46■□□□□ 0.39
PRKCSH-201ENST00000585325 POTEIP0CG38 1075 aa17.46■□□□□ 0.39
PRKCSH-201ENST00000585325 POTEJP0CG39 1038 aa17.46■□□□□ 0.39
PRKCSH-201ENST00000585325 PARP10Q53GL7 1025 aa17.46■□□□□ 0.39
PRKCSH-201ENST00000585325 RTKN2Q8IZC4 609 aa17.46■□□□□ 0.39
PRKCSH-201ENST00000585325 COPS6Q7L5N1 327 aa17.45■□□□□ 0.38
PRKCSH-201ENST00000585325 XAGE3Q8WTP9 111 aa17.45■□□□□ 0.38
PRKCSH-201ENST00000585325 ZNF277Q9NRM2 450 aaPredicted RBP17.45■□□□□ 0.38
PRKCSH-201ENST00000585325 ANKRD36CQ5JPF3 1778 aa17.45■□□□□ 0.38
PRKCSH-201ENST00000585325 DDNO94850 711 aaPredicted RBP17.44■□□□□ 0.38
PRKCSH-201ENST00000585325 UTP14AQ9BVJ6 771 aaKnown RBP17.44■□□□□ 0.38
PRKCSH-201ENST00000585325 DDX21Q9NR30 783 aaKnown RBP eCLIP17.44■□□□□ 0.38
PRKCSH-201ENST00000585325 CTCFP49711 727 aaPredicted RBP17.43■□□□□ 0.38
PRKCSH-201ENST00000585325 HSP90AB3PQ58FF7 597 aa17.43■□□□□ 0.38
PRKCSH-201ENST00000585325 HDGFL1Q5TGJ6 251 aa17.43■□□□□ 0.38
PRKCSH-201ENST00000585325 AIDAQ96BJ3 306 aa17.43■□□□□ 0.38
PRKCSH-201ENST00000585325 RBM17Q96I25 401 aaKnown RBP17.43■□□□□ 0.38
PRKCSH-201ENST00000585325 CHPF2Q9P2E5 772 aa17.43■□□□□ 0.38
PRKCSH-201ENST00000585325 APAF1O14727 1248 aa17.42■□□□□ 0.38
PRKCSH-201ENST00000585325 HOXA10P31260 410 aaPredicted RBP17.42■□□□□ 0.38
PRKCSH-201ENST00000585325 SYNE4Q8N205 404 aa17.42■□□□□ 0.38
PRKCSH-201ENST00000585325 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
PRKCSH-201ENST00000585325 NLRP3Q96P20 1036 aa17.42■□□□□ 0.38
PRKCSH-201ENST00000585325 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-201ENST00000585325 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-201ENST00000585325 C3orf67Q6ZVT6 689 aa17.41■□□□□ 0.38
PRKCSH-201ENST00000585325 PPEF1O14829 653 aaPredicted RBP17.4■□□□□ 0.38
PRKCSH-201ENST00000585325 HOXB7P09629 217 aa17.4■□□□□ 0.38
PRKCSH-201ENST00000585325 CC2D2BQ6DHV5 1058 aa17.4■□□□□ 0.38
PRKCSH-201ENST00000585325 CRAMP1Q96RY5 1269 aa17.4■□□□□ 0.38
PRKCSH-201ENST00000585325 MBIPQ9NS73 344 aa17.4■□□□□ 0.38
PRKCSH-201ENST00000585325 PASKQ96RG2 1323 aa17.4■□□□□ 0.38
PRKCSH-201ENST00000585325 ZNF541Q9H0D2 1346 aa17.4■□□□□ 0.38
PRKCSH-201ENST00000585325 SNED1Q8TER0 1413 aa17.39■□□□□ 0.38
PRKCSH-201ENST00000585325 VEGFBP49765 207 aa17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 LBX1P52954 281 aa17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 FAM161AQ3B820 660 aa17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 DUSP27Q5VZP5 1158 aa17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 NLRP10Q86W26 655 aa17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 PSMD1Q99460 953 aa17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 RNF123Q5XPI4 1314 aa17.39■□□□□ 0.37
PRKCSH-201ENST00000585325 IQCA1LA6NCM1 817 aa17.38■□□□□ 0.37
PRKCSH-201ENST00000585325 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-201ENST00000585325 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-201ENST00000585325 SLC10A5Q5PT55 438 aa17.38■□□□□ 0.37
PRKCSH-201ENST00000585325 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-201ENST00000585325 WBP1LQ9NX94 342 aa17.38■□□□□ 0.37
PRKCSH-201ENST00000585325 TRMT112Q9UI30 125 aaKnown RBP17.38■□□□□ 0.37
PRKCSH-201ENST00000585325 LAMB2P55268 1798 aa17.38■□□□□ 0.37
PRKCSH-201ENST00000585325 SCN4AP35499 1836 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 HCLS1P14317 486 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 GRIPAP1Q4V328 841 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 SLC51AQ86UW1 340 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 LDHDQ86WU2 507 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 ABHD8Q96I13 439 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 L3MBTL3Q96JM7 780 aaPredicted RBP17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 IFT57Q9NWB7 429 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 SH3TC1Q8TE82 1336 aa17.37■□□□□ 0.37
PRKCSH-201ENST00000585325 TMEM88BA6NKF7 163 aa17.36■□□□□ 0.37
PRKCSH-201ENST00000585325 FZD9O00144 591 aa17.36■□□□□ 0.37
PRKCSH-201ENST00000585325 ZNF853P0CG23 659 aa17.36■□□□□ 0.37
PRKCSH-201ENST00000585325 GNAI1P63096 354 aa17.36■□□□□ 0.37
PRKCSH-201ENST00000585325 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
PRKCSH-201ENST00000585325 HYPKQ9NX55 129 aa17.36■□□□□ 0.37
PRKCSH-201ENST00000585325 ABCC4O15439 1325 aa17.36■□□□□ 0.37
PRKCSH-201ENST00000585325 TAF1DQ9H5J8 278 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-201ENST00000585325 ELL2O00472 640 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-201ENST00000585325 HSPA8P11142 646 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-201ENST00000585325 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
PRKCSH-201ENST00000585325 LARGE2Q8N3Y3 721 aa17.34■□□□□ 0.37
PRKCSH-201ENST00000585325 HACL1Q9UJ83 578 aa17.34■□□□□ 0.37
PRKCSH-201ENST00000585325 COL4A5P29400 1685 aa17.33■□□□□ 0.37
PRKCSH-201ENST00000585325 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
PRKCSH-201ENST00000585325 ITGBL1O95965 494 aaPredicted RBP17.33■□□□□ 0.36
PRKCSH-201ENST00000585325 EIF6P56537 245 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-201ENST00000585325 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
PRKCSH-201ENST00000585325 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-201ENST00000585325 GPC2Q8N158 579 aa17.33■□□□□ 0.36
PRKCSH-201ENST00000585325 ATP6V0A2Q9Y487 856 aa17.33■□□□□ 0.36
PRKCSH-201ENST00000585325 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-201ENST00000585325 RIC3Q7Z5B4 369 aa17.32■□□□□ 0.36
PRKCSH-201ENST00000585325 ISCA1Q9BUE6 129 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms