RNA–Protein interactions for RNA: ENST00000585101.5

ATPAF2-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 4 BASIC

Gene ATPAF2, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-213ENST00000585101 HOXB7P09629 217 aa22.8■■□□□ 1.24
ATPAF2-213ENST00000585101 PPP1R42Q7Z4L9 355 aa22.8■■□□□ 1.24
ATPAF2-213ENST00000585101 UTP14AQ9BVJ6 771 aaKnown RBP22.79■■□□□ 1.24
ATPAF2-213ENST00000585101 ATP5J2-PTCD1G3V325 749 aa22.78■■□□□ 1.24
ATPAF2-213ENST00000585101 TCIRG1Q13488 830 aa22.78■■□□□ 1.24
ATPAF2-213ENST00000585101 PARP10Q53GL7 1025 aa22.78■■□□□ 1.24
ATPAF2-213ENST00000585101 NLRP10Q86W26 655 aa22.78■■□□□ 1.24
ATPAF2-213ENST00000585101 C7orf43Q8WVR3 580 aa22.78■■□□□ 1.24
ATPAF2-213ENST00000585101 DICER1Q9UPY3 1922 aaKnown RBP22.78■■□□□ 1.24
ATPAF2-213ENST00000585101 LAMB2P55268 1798 aa22.78■■□□□ 1.24
ATPAF2-213ENST00000585101 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
ATPAF2-213ENST00000585101 ANKRD13DQ6ZTN6 518 aa22.77■■□□□ 1.24
ATPAF2-213ENST00000585101 RPGRQ92834 1020 aaKnown RBP22.77■■□□□ 1.24
ATPAF2-213ENST00000585101 RRAGCQ9HB90 399 aa22.77■■□□□ 1.24
ATPAF2-213ENST00000585101 IBTKQ9P2D0 1353 aaPredicted RBP22.76■■□□□ 1.23
ATPAF2-213ENST00000585101 CCDC27Q2M243 656 aa22.76■■□□□ 1.23
ATPAF2-213ENST00000585101 CRY2Q49AN0 593 aa22.76■■□□□ 1.23
ATPAF2-213ENST00000585101 PLBD2Q8NHP8 589 aa22.76■■□□□ 1.23
ATPAF2-213ENST00000585101 TAOK3Q9H2K8 898 aa22.76■■□□□ 1.23
ATPAF2-213ENST00000585101 HYPKQ9NX55 129 aa22.76■■□□□ 1.23
ATPAF2-213ENST00000585101 TAF1P21675 1872 aa22.76■■□□□ 1.23
ATPAF2-213ENST00000585101 HSP90AB3PQ58FF7 597 aa22.75■■□□□ 1.23
ATPAF2-213ENST00000585101 RTL5Q5HYW3 569 aaPredicted RBP22.75■■□□□ 1.23
ATPAF2-213ENST00000585101 TRMT112Q9UI30 125 aaKnown RBP22.75■■□□□ 1.23
ATPAF2-213ENST00000585101 ALDH1B1P30837 517 aa22.74■■□□□ 1.23
ATPAF2-213ENST00000585101 CCDC93Q567U6 631 aa22.74■■□□□ 1.23
ATPAF2-213ENST00000585101 ZNF277Q9NRM2 450 aaPredicted RBP22.73■■□□□ 1.23
ATPAF2-213ENST00000585101 RIC3Q7Z5B4 369 aa22.72■■□□□ 1.23
ATPAF2-213ENST00000585101 NLRP3Q96P20 1036 aa22.72■■□□□ 1.23
ATPAF2-213ENST00000585101 KDM2BQ8NHM5 1336 aa22.72■■□□□ 1.23
ATPAF2-213ENST00000585101 SOGA3Q5TF21 947 aa22.71■■□□□ 1.23
ATPAF2-213ENST00000585101 FAM89AQ96GI7 184 aa22.71■■□□□ 1.23
ATPAF2-213ENST00000585101 RBM17Q96I25 401 aaKnown RBP22.71■■□□□ 1.23
ATPAF2-213ENST00000585101 ISCA1Q9BUE6 129 aa22.71■■□□□ 1.23
ATPAF2-213ENST00000585101 RIC1Q4ADV7 1423 aa22.71■■□□□ 1.23
ATPAF2-213ENST00000585101 DDX60Q8IY21 1712 aaKnown RBP22.71■■□□□ 1.23
ATPAF2-213ENST00000585101 GOLGA2Q08379 1002 aa22.7■■□□□ 1.22
ATPAF2-213ENST00000585101 SLC10A5Q5PT55 438 aa22.7■■□□□ 1.22
ATPAF2-213ENST00000585101 CCDC30Q5VVM6 783 aa22.7■■□□□ 1.22
ATPAF2-213ENST00000585101 JARID2Q92833 1246 aaPredicted RBP22.7■■□□□ 1.22
ATPAF2-213ENST00000585101 MYD88Q99836 296 aa22.7■■□□□ 1.22
ATPAF2-213ENST00000585101 SPINK5Q9NQ38 1064 aaPredicted RBP22.7■■□□□ 1.22
ATPAF2-213ENST00000585101 SH3TC1Q8TE82 1336 aa22.69■■□□□ 1.22
ATPAF2-213ENST00000585101 LTBP3Q9NS15 1303 aa22.69■■□□□ 1.22
ATPAF2-213ENST00000585101 FANCIQ9NVI1 1328 aa22.69■■□□□ 1.22
ATPAF2-213ENST00000585101 GLTPD2A6NH11 291 aa22.69■■□□□ 1.22
ATPAF2-213ENST00000585101 HOXA10P31260 410 aaPredicted RBP22.69■■□□□ 1.22
ATPAF2-213ENST00000585101 FKBP4Q02790 459 aaKnown RBP eCLIP22.69■■□□□ 1.22
ATPAF2-213ENST00000585101 TWISTNBQ3B726 338 aaPredicted RBP22.69■■□□□ 1.22
ATPAF2-213ENST00000585101 PPEF1O14829 653 aaPredicted RBP22.68■■□□□ 1.22
ATPAF2-213ENST00000585101 ABCC4O15439 1325 aa22.67■■□□□ 1.22
ATPAF2-213ENST00000585101 IL16Q14005 1332 aa22.67■■□□□ 1.22
ATPAF2-213ENST00000585101 G2E3Q7L622 706 aa22.67■■□□□ 1.22
ATPAF2-213ENST00000585101 C16orf71Q8IYS4 520 aaPredicted RBP22.67■■□□□ 1.22
ATPAF2-213ENST00000585101 CRAMP1Q96RY5 1269 aa22.67■■□□□ 1.22
ATPAF2-213ENST00000585101 EXOSC9Q06265 439 aaKnown RBP22.66■■□□□ 1.22
ATPAF2-213ENST00000585101 RTKN2Q8IZC4 609 aa22.66■■□□□ 1.22
ATPAF2-213ENST00000585101 ZC3H4Q9UPT8 1303 aaKnown RBP22.65■■□□□ 1.22
ATPAF2-213ENST00000585101 TOMM70O94826 608 aa22.65■■□□□ 1.22
ATPAF2-213ENST00000585101 DDNO94850 711 aaPredicted RBP22.65■■□□□ 1.22
ATPAF2-213ENST00000585101 SNED1Q8TER0 1413 aa22.65■■□□□ 1.22
ATPAF2-213ENST00000585101 COL4A1P02462 1669 aa22.65■■□□□ 1.22
ATPAF2-213ENST00000585101 WDR63Q8IWG1 891 aa22.64■■□□□ 1.21
ATPAF2-213ENST00000585101 STK31Q9BXU1 1019 aa22.64■■□□□ 1.21
ATPAF2-213ENST00000585101 MAP3K2Q9Y2U5 619 aa22.64■■□□□ 1.21
ATPAF2-213ENST00000585101 RNF123Q5XPI4 1314 aa22.63■■□□□ 1.21
ATPAF2-213ENST00000585101 COL4A5P29400 1685 aa22.63■■□□□ 1.21
ATPAF2-213ENST00000585101 POTECB2RU33 542 aa22.63■■□□□ 1.21
ATPAF2-213ENST00000585101 SLC4A2P04920 1241 aa22.63■■□□□ 1.21
ATPAF2-213ENST00000585101 IARSP41252 1262 aaKnown RBP22.63■■□□□ 1.21
ATPAF2-213ENST00000585101 DPY19L2Q6NUT2 758 aa22.63■■□□□ 1.21
ATPAF2-213ENST00000585101 ZNF541Q9H0D2 1346 aa22.62■■□□□ 1.21
ATPAF2-213ENST00000585101 PI4KAP2A4QPH2 592 aa22.62■■□□□ 1.21
ATPAF2-213ENST00000585101 PI4KAP1Q8N8J0 262 aa22.62■■□□□ 1.21
ATPAF2-213ENST00000585101 IRS4O14654 1257 aaPredicted RBP22.61■■□□□ 1.21
ATPAF2-213ENST00000585101 HSPA6P17066 643 aa22.61■■□□□ 1.21
ATPAF2-213ENST00000585101 NCBP3Q53F19 620 aaKnown RBP22.61■■□□□ 1.21
ATPAF2-213ENST00000585101 DDX46Q7L014 1031 aaKnown RBP22.61■■□□□ 1.21
ATPAF2-213ENST00000585101 WDR90Q96KV7 1748 aa22.61■■□□□ 1.21
ATPAF2-213ENST00000585101 METTL22Q9BUU2 404 aaPredicted RBP22.61■■□□□ 1.21
ATPAF2-213ENST00000585101 VAMP4O75379 141 aa22.6■■□□□ 1.21
ATPAF2-213ENST00000585101 DDX58O95786 925 aaKnown RBP22.6■■□□□ 1.21
ATPAF2-213ENST00000585101 VEGFAP15692 232 aaPredicted RBP22.6■■□□□ 1.21
ATPAF2-213ENST00000585101 CCDC85AQ96PX6 553 aaPredicted RBP22.6■■□□□ 1.21
ATPAF2-213ENST00000585101 CEP350Q5VT06 3117 aa22.6■■□□□ 1.21
ATPAF2-213ENST00000585101 TRIM28Q13263 835 aaKnown RBP22.59■■□□□ 1.21
ATPAF2-213ENST00000585101 KSR2Q6VAB6 950 aa22.59■■□□□ 1.21
ATPAF2-213ENST00000585101 RBM46Q8TBY0 533 aaKnown RBP22.59■■□□□ 1.21
ATPAF2-213ENST00000585101 PSMD1Q99460 953 aa22.59■■□□□ 1.21
ATPAF2-213ENST00000585101 ATP6V0A2Q9Y487 856 aa22.59■■□□□ 1.21
ATPAF2-213ENST00000585101 GRAPQ13588 217 aa22.58■■□□□ 1.21
ATPAF2-213ENST00000585101 GRAPLQ8TC17 118 aaPredicted RBP22.58■■□□□ 1.21
ATPAF2-213ENST00000585101 CELF1Q92879 486 aaKnown RBP22.58■■□□□ 1.21
ATPAF2-213ENST00000585101 CWC25Q9NXE8 425 aaPredicted RBP22.58■■□□□ 1.21
ATPAF2-213ENST00000585101 IGKV5-2P06315 115 aa22.57■■□□□ 1.2
ATPAF2-213ENST00000585101 CWF19L2Q2TBE0 894 aaKnown RBP22.57■■□□□ 1.2
ATPAF2-213ENST00000585101 CC2D2BQ6DHV5 1058 aa22.57■■□□□ 1.2
ATPAF2-213ENST00000585101 ZBTB38Q8NAP3 1195 aaPredicted RBP22.57■■□□□ 1.2
ATPAF2-213ENST00000585101 HTRA3P83110 453 aa22.56■■□□□ 1.2
ATPAF2-213ENST00000585101 AOC3Q16853 763 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms