RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 JARID2Q92833 1246 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-236ENST00000584991 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-236ENST00000584991 HDAC5Q9UQL6 1122 aa18.41■□□□□ 0.54
CDK5RAP3-236ENST00000584991 CNTNAP4Q9C0A0 1308 aa18.41■□□□□ 0.54
CDK5RAP3-236ENST00000584991 A0A087WZG4 1122 aa18.4■□□□□ 0.54
CDK5RAP3-236ENST00000584991 MCM4P33991 863 aa18.4■□□□□ 0.54
CDK5RAP3-236ENST00000584991 CCDC191Q8NCU4 936 aa18.4■□□□□ 0.54
CDK5RAP3-236ENST00000584991 IL27Q8NEV9 243 aa18.4■□□□□ 0.54
CDK5RAP3-236ENST00000584991 SUCLG2Q96I99 432 aa18.4■□□□□ 0.54
CDK5RAP3-236ENST00000584991 ISCA1Q9BUE6 129 aa18.4■□□□□ 0.54
CDK5RAP3-236ENST00000584991 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
CDK5RAP3-236ENST00000584991 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.54
CDK5RAP3-236ENST00000584991 RC3H1Q5TC82 1133 aaKnown RBP18.39■□□□□ 0.54
CDK5RAP3-236ENST00000584991 PPP1R42Q7Z4L9 355 aa18.39■□□□□ 0.54
CDK5RAP3-236ENST00000584991 COL15A1P39059 1388 aa18.39■□□□□ 0.53
CDK5RAP3-236ENST00000584991 PTMSP20962 102 aa18.39■□□□□ 0.53
CDK5RAP3-236ENST00000584991 UBE3BQ7Z3V4 1068 aa18.39■□□□□ 0.53
CDK5RAP3-236ENST00000584991 KAZALD1Q96I82 304 aa18.39■□□□□ 0.53
CDK5RAP3-236ENST00000584991 HSP90AB3PQ58FF7 597 aa18.38■□□□□ 0.53
CDK5RAP3-236ENST00000584991 DDIT3P35638 169 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 BICC1Q9H694 974 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 LRRC4BQ9NT99 713 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 DDX11L8A8MPP1 907 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 H7C1W4 665 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 SRGAP3O43295 1099 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 GPTP24298 496 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 CASP7P55210 303 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 TRIM28Q13263 835 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 C4BP0C0L5 1744 aa18.37■□□□□ 0.53
CDK5RAP3-236ENST00000584991 CAMTA2O94983 1202 aa18.36■□□□□ 0.53
CDK5RAP3-236ENST00000584991 GNPATO15228 680 aa18.35■□□□□ 0.53
CDK5RAP3-236ENST00000584991 RPS6KA4O75676 772 aa18.35■□□□□ 0.53
CDK5RAP3-236ENST00000584991 MTX1Q13505 466 aa18.35■□□□□ 0.53
CDK5RAP3-236ENST00000584991 POLA2Q14181 598 aa18.35■□□□□ 0.53
CDK5RAP3-236ENST00000584991 SMIM5Q71RC9 77 aa18.35■□□□□ 0.53
CDK5RAP3-236ENST00000584991 CDC45O75419 566 aa18.35■□□□□ 0.53
CDK5RAP3-236ENST00000584991 EPHA10Q5JZY3 1008 aa18.35■□□□□ 0.53
CDK5RAP3-236ENST00000584991 EXOC6BQ9Y2D4 811 aa18.35■□□□□ 0.53
CDK5RAP3-236ENST00000584991 APBB1O00213 710 aa18.34■□□□□ 0.53
CDK5RAP3-236ENST00000584991 SLC27A3Q5K4L6 730 aa18.34■□□□□ 0.53
CDK5RAP3-236ENST00000584991 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
CDK5RAP3-236ENST00000584991 BRPF3Q9ULD4 1205 aa18.34■□□□□ 0.53
CDK5RAP3-236ENST00000584991 BCORQ6W2J9 1755 aa18.34■□□□□ 0.53
CDK5RAP3-236ENST00000584991 APBA3O96018 575 aa18.33■□□□□ 0.53
CDK5RAP3-236ENST00000584991 ZNF34Q8IZ26 560 aa18.33■□□□□ 0.53
CDK5RAP3-236ENST00000584991 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.53
CDK5RAP3-236ENST00000584991 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
CDK5RAP3-236ENST00000584991 TBC1D9Q6ZT07 1266 aa18.32■□□□□ 0.52
CDK5RAP3-236ENST00000584991 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
CDK5RAP3-236ENST00000584991 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
CDK5RAP3-236ENST00000584991 AK7Q96M32 723 aa18.32■□□□□ 0.52
CDK5RAP3-236ENST00000584991 UBN2Q6ZU65 1347 aa18.32■□□□□ 0.52
CDK5RAP3-236ENST00000584991 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 PCCAP05165 728 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 PROM2Q8N271 834 aa18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 ZBTB38Q8NAP3 1195 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 PLSCR1O15162 318 aa18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 KIF2CQ99661 725 aa18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 TNS1Q9HBL0 1735 aaKnown RBP18.31■□□□□ 0.52
CDK5RAP3-236ENST00000584991 FSD2A1L4K1 749 aa18.3■□□□□ 0.52
CDK5RAP3-236ENST00000584991 FOXO4P98177 505 aa18.3■□□□□ 0.52
CDK5RAP3-236ENST00000584991 SKOR2Q2VWA4 1001 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-236ENST00000584991 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-236ENST00000584991 PLEKHM2Q8IWE5 1019 aa18.3■□□□□ 0.52
CDK5RAP3-236ENST00000584991 ZNF652Q9Y2D9 606 aa18.3■□□□□ 0.52
CDK5RAP3-236ENST00000584991 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 PHF14O94880 888 aa18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 ARHGEF1Q92888 912 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 GBP4Q96PP9 640 aa18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 NARFQ9UHQ1 456 aa18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 TRMT112Q9UI30 125 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 PA2G4Q9UQ80 394 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 NIP7Q9Y221 180 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDK5RAP3-236ENST00000584991 UBR3Q6ZT12 1888 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 GOLGA6L3A6NEY3 463 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 K7ELQ4 463 aaPredicted RBP18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 TRAK2O60296 914 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 ZPR1O75312 459 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 TRAPPC3LQ5T215 181 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 TTC22Q5TAA0 569 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 SUSD4Q5VX71 490 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 USPL1Q5W0Q7 1092 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 LRRCC1Q9C099 1032 aa18.28■□□□□ 0.52
CDK5RAP3-236ENST00000584991 C4AP0C0L4 1744 aa18.27■□□□□ 0.52
CDK5RAP3-236ENST00000584991 FAM177BA6PVY3 158 aa18.27■□□□□ 0.52
CDK5RAP3-236ENST00000584991 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
CDK5RAP3-236ENST00000584991 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.52
CDK5RAP3-236ENST00000584991 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
CDK5RAP3-236ENST00000584991 CDHR2Q9BYE9 1310 aa18.27■□□□□ 0.52
CDK5RAP3-236ENST00000584991 RAB11FIP3O75154 756 aa18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RAB3GAP1Q15042 981 aa18.26■□□□□ 0.51
CDK5RAP3-236ENST00000584991 RABEP1Q15276 862 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms