RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CCDC93Q567U6 631 aa23.4■■□□□ 1.34
SRSF1-208ENST00000584773 C8orf58Q8NAV2 365 aa23.4■■□□□ 1.34
SRSF1-208ENST00000584773 RIC1Q4ADV7 1423 aa23.4■■□□□ 1.34
SRSF1-208ENST00000584773 LTBP3Q9NS15 1303 aa23.4■■□□□ 1.34
SRSF1-208ENST00000584773 CALD1Q05682 793 aaKnown RBP23.39■■□□□ 1.34
SRSF1-208ENST00000584773 NLRP10Q86W26 655 aa23.39■■□□□ 1.34
SRSF1-208ENST00000584773 TSR2Q969E8 191 aaKnown RBP23.39■■□□□ 1.34
SRSF1-208ENST00000584773 UTP14AQ9BVJ6 771 aaKnown RBP23.39■■□□□ 1.34
SRSF1-208ENST00000584773 DBF4Q9UBU7 674 aaPredicted RBP23.39■■□□□ 1.34
SRSF1-208ENST00000584773 LAMB2P55268 1798 aa23.39■■□□□ 1.33
SRSF1-208ENST00000584773 ZC3H4Q9UPT8 1303 aaKnown RBP23.39■■□□□ 1.33
SRSF1-208ENST00000584773 TCIRG1Q13488 830 aa23.38■■□□□ 1.33
SRSF1-208ENST00000584773 SOGA3Q5TF21 947 aa23.38■■□□□ 1.33
SRSF1-208ENST00000584773 GLTPD2A6NH11 291 aa23.37■■□□□ 1.33
SRSF1-208ENST00000584773 TSPYL6Q8N831 410 aa23.37■■□□□ 1.33
SRSF1-208ENST00000584773 RPGRQ92834 1020 aaKnown RBP23.37■■□□□ 1.33
SRSF1-208ENST00000584773 SALL2Q9Y467 1007 aaPredicted RBP23.37■■□□□ 1.33
SRSF1-208ENST00000584773 CEP350Q5VT06 3117 aa23.36■■□□□ 1.33
SRSF1-208ENST00000584773 TCERG1O14776 1098 aaKnown RBP23.36■■□□□ 1.33
SRSF1-208ENST00000584773 TOMM70O94826 608 aa23.36■■□□□ 1.33
SRSF1-208ENST00000584773 ALDH1B1P30837 517 aa23.36■■□□□ 1.33
SRSF1-208ENST00000584773 HSP90AB3PQ58FF7 597 aa23.36■■□□□ 1.33
SRSF1-208ENST00000584773 WWC1Q8IX03 1113 aa23.36■■□□□ 1.33
SRSF1-208ENST00000584773 PLBD2Q8NHP8 589 aa23.36■■□□□ 1.33
SRSF1-208ENST00000584773 PHAXQ9H814 394 aaKnown RBP23.36■■□□□ 1.33
SRSF1-208ENST00000584773 ZNF277Q9NRM2 450 aaPredicted RBP23.36■■□□□ 1.33
SRSF1-208ENST00000584773 SNED1Q8TER0 1413 aa23.36■■□□□ 1.33
SRSF1-208ENST00000584773 ATP5J2-PTCD1G3V325 749 aa23.35■■□□□ 1.33
SRSF1-208ENST00000584773 HCLS1P14317 486 aaPredicted RBP23.35■■□□□ 1.33
SRSF1-208ENST00000584773 HSPA6P17066 643 aa23.35■■□□□ 1.33
SRSF1-208ENST00000584773 ANKRD13DQ6ZTN6 518 aa23.35■■□□□ 1.33
SRSF1-208ENST00000584773 HYPKQ9NX55 129 aa23.35■■□□□ 1.33
SRSF1-208ENST00000584773 HOXA10P31260 410 aaPredicted RBP23.34■■□□□ 1.33
SRSF1-208ENST00000584773 FKBP4Q02790 459 aaKnown RBP eCLIP23.34■■□□□ 1.33
SRSF1-208ENST00000584773 CCDC27Q2M243 656 aa23.33■■□□□ 1.33
SRSF1-208ENST00000584773 SLC10A5Q5PT55 438 aa23.33■■□□□ 1.33
SRSF1-208ENST00000584773 C16orf71Q8IYS4 520 aaPredicted RBP23.33■■□□□ 1.33
SRSF1-208ENST00000584773 NLRP3Q96P20 1036 aa23.33■■□□□ 1.33
SRSF1-208ENST00000584773 TRMT112Q9UI30 125 aaKnown RBP23.33■■□□□ 1.33
SRSF1-208ENST00000584773 DDX60Q8IY21 1712 aaKnown RBP23.33■■□□□ 1.33
SRSF1-208ENST00000584773 TAF1P21675 1872 aa23.33■■□□□ 1.32
SRSF1-208ENST00000584773 RBM17Q96I25 401 aaKnown RBP23.33■■□□□ 1.32
SRSF1-208ENST00000584773 ISCA1Q9BUE6 129 aa23.33■■□□□ 1.32
SRSF1-208ENST00000584773 POTECB2RU33 542 aa23.32■■□□□ 1.32
SRSF1-208ENST00000584773 PPEF1O14829 653 aaPredicted RBP23.32■■□□□ 1.32
SRSF1-208ENST00000584773 CRAMP1Q96RY5 1269 aa23.32■■□□□ 1.32
SRSF1-208ENST00000584773 WDR90Q96KV7 1748 aa23.31■■□□□ 1.32
SRSF1-208ENST00000584773 ABCC4O15439 1325 aa23.31■■□□□ 1.32
SRSF1-208ENST00000584773 SH3TC1Q8TE82 1336 aa23.31■■□□□ 1.32
SRSF1-208ENST00000584773 DDNO94850 711 aaPredicted RBP23.31■■□□□ 1.32
SRSF1-208ENST00000584773 RTKN2Q8IZC4 609 aa23.31■■□□□ 1.32
SRSF1-208ENST00000584773 RBM46Q8TBY0 533 aaKnown RBP23.31■■□□□ 1.32
SRSF1-208ENST00000584773 COL4A5P29400 1685 aa23.3■■□□□ 1.32
SRSF1-208ENST00000584773 RNF123Q5XPI4 1314 aa23.3■■□□□ 1.32
SRSF1-208ENST00000584773 RTL5Q5HYW3 569 aaPredicted RBP23.3■■□□□ 1.32
SRSF1-208ENST00000584773 FAM9BQ8IZU0 186 aa23.3■■□□□ 1.32
SRSF1-208ENST00000584773 ZNF541Q9H0D2 1346 aa23.29■■□□□ 1.32
SRSF1-208ENST00000584773 DPY19L2Q6NUT2 758 aa23.29■■□□□ 1.32
SRSF1-208ENST00000584773 RIC3Q7Z5B4 369 aa23.29■■□□□ 1.32
SRSF1-208ENST00000584773 FAM89AQ96GI7 184 aa23.29■■□□□ 1.32
SRSF1-208ENST00000584773 VEGFAP15692 232 aaPredicted RBP23.28■■□□□ 1.32
SRSF1-208ENST00000584773 IARSP41252 1262 aaKnown RBP23.28■■□□□ 1.32
SRSF1-208ENST00000584773 GOLGA2Q08379 1002 aa23.28■■□□□ 1.32
SRSF1-208ENST00000584773 COL4A1P02462 1669 aa23.27■■□□□ 1.32
SRSF1-208ENST00000584773 CCDC30Q5VVM6 783 aa23.27■■□□□ 1.32
SRSF1-208ENST00000584773 PSMD1Q99460 953 aa23.26■■□□□ 1.31
SRSF1-208ENST00000584773 MYD88Q99836 296 aa23.26■■□□□ 1.31
SRSF1-208ENST00000584773 IL16Q14005 1332 aa23.25■■□□□ 1.31
SRSF1-208ENST00000584773 FANCIQ9NVI1 1328 aa23.25■■□□□ 1.31
SRSF1-208ENST00000584773 TWISTNBQ3B726 338 aaPredicted RBP23.25■■□□□ 1.31
SRSF1-208ENST00000584773 HTRA3P83110 453 aa23.24■■□□□ 1.31
SRSF1-208ENST00000584773 JARID2Q92833 1246 aaPredicted RBP23.24■■□□□ 1.31
SRSF1-208ENST00000584773 SPINK5Q9NQ38 1064 aaPredicted RBP23.24■■□□□ 1.31
SRSF1-208ENST00000584773 CC2D2BQ6DHV5 1058 aa23.23■■□□□ 1.31
SRSF1-208ENST00000584773 G2E3Q7L622 706 aa23.23■■□□□ 1.31
SRSF1-208ENST00000584773 ATP6V0A2Q9Y487 856 aa23.23■■□□□ 1.31
SRSF1-208ENST00000584773 POTEIP0CG38 1075 aa23.22■■□□□ 1.31
SRSF1-208ENST00000584773 POTEJP0CG39 1038 aa23.22■■□□□ 1.31
SRSF1-208ENST00000584773 FSTL1Q12841 308 aa23.22■■□□□ 1.31
SRSF1-208ENST00000584773 TRIM28Q13263 835 aaKnown RBP23.21■■□□□ 1.31
SRSF1-208ENST00000584773 GRAPQ13588 217 aa23.21■■□□□ 1.31
SRSF1-208ENST00000584773 NCBP3Q53F19 620 aaKnown RBP23.21■■□□□ 1.31
SRSF1-208ENST00000584773 DDX46Q7L014 1031 aaKnown RBP23.21■■□□□ 1.31
SRSF1-208ENST00000584773 SMC1BQ8NDV3 1235 aa23.21■■□□□ 1.31
SRSF1-208ENST00000584773 GRAPLQ8TC17 118 aaPredicted RBP23.21■■□□□ 1.31
SRSF1-208ENST00000584773 MAP3K2Q9Y2U5 619 aa23.21■■□□□ 1.31
SRSF1-208ENST00000584773 FZD9O00144 591 aa23.2■■□□□ 1.3
SRSF1-208ENST00000584773 IRS4O14654 1257 aaPredicted RBP23.2■■□□□ 1.3
SRSF1-208ENST00000584773 APLP1P51693 650 aa23.19■■□□□ 1.3
SRSF1-208ENST00000584773 WDR63Q8IWG1 891 aa23.19■■□□□ 1.3
SRSF1-208ENST00000584773 LARGE2Q8N3Y3 721 aa23.19■■□□□ 1.3
SRSF1-208ENST00000584773 CELF1Q92879 486 aaKnown RBP23.19■■□□□ 1.3
SRSF1-208ENST00000584773 METTL22Q9BUU2 404 aaPredicted RBP23.19■■□□□ 1.3
SRSF1-208ENST00000584773 STK31Q9BXU1 1019 aa23.19■■□□□ 1.3
SRSF1-208ENST00000584773 PI4KAP2A4QPH2 592 aa23.18■■□□□ 1.3
SRSF1-208ENST00000584773 EXOSC9Q06265 439 aaKnown RBP23.18■■□□□ 1.3
SRSF1-208ENST00000584773 AOC3Q16853 763 aa23.18■■□□□ 1.3
SRSF1-208ENST00000584773 PI4KAP1Q8N8J0 262 aa23.18■■□□□ 1.3
SRSF1-208ENST00000584773 ZBTB38Q8NAP3 1195 aaPredicted RBP23.18■■□□□ 1.3
SRSF1-208ENST00000584773 LRRC37AA6NMS7 1700 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms