RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
ERBB2-220ENST00000584684 SNED1Q8TER0 1413 aa17.05■□□□□ 0.32
ERBB2-220ENST00000584684 KIF3CO14782 793 aa17.05■□□□□ 0.32
ERBB2-220ENST00000584684 TAOK3Q9H2K8 898 aa17.05■□□□□ 0.32
ERBB2-220ENST00000584684 LAMB2P55268 1798 aa17.05■□□□□ 0.32
ERBB2-220ENST00000584684 KDM2BQ8NHM5 1336 aa17.04■□□□□ 0.32
ERBB2-220ENST00000584684 ALDH1B1P30837 517 aa17.04■□□□□ 0.32
ERBB2-220ENST00000584684 HOXA10P31260 410 aaPredicted RBP17.04■□□□□ 0.32
ERBB2-220ENST00000584684 AIMP1Q12904 312 aaKnown RBP17.04■□□□□ 0.32
ERBB2-220ENST00000584684 TCIRG1Q13488 830 aa17.04■□□□□ 0.32
ERBB2-220ENST00000584684 NLRP10Q86W26 655 aa17.04■□□□□ 0.32
ERBB2-220ENST00000584684 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
ERBB2-220ENST00000584684 CCDC93Q567U6 631 aa17.03■□□□□ 0.32
ERBB2-220ENST00000584684 SLC10A5Q5PT55 438 aa17.03■□□□□ 0.32
ERBB2-220ENST00000584684 DDX60Q8IY21 1712 aaKnown RBP17.02■□□□□ 0.32
ERBB2-220ENST00000584684 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.32
ERBB2-220ENST00000584684 C8orf58Q8NAV2 365 aa17.02■□□□□ 0.32
ERBB2-220ENST00000584684 RPGRQ92834 1020 aaKnown RBP17.01■□□□□ 0.31
ERBB2-220ENST00000584684 CRAMP1Q96RY5 1269 aa17.01■□□□□ 0.31
ERBB2-220ENST00000584684 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
ERBB2-220ENST00000584684 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
ERBB2-220ENST00000584684 WDR90Q96KV7 1748 aa17.01■□□□□ 0.31
ERBB2-220ENST00000584684 CEP350Q5VT06 3117 aa17.01■□□□□ 0.31
ERBB2-220ENST00000584684 TRIM28Q13263 835 aaKnown RBP17■□□□□ 0.31
ERBB2-220ENST00000584684 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
ERBB2-220ENST00000584684 CC2D2BQ6DHV5 1058 aa17■□□□□ 0.31
ERBB2-220ENST00000584684 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
ERBB2-220ENST00000584684 TSR2Q969E8 191 aaKnown RBP17■□□□□ 0.31
ERBB2-220ENST00000584684 ISCA1Q9BUE6 129 aa17■□□□□ 0.31
ERBB2-220ENST00000584684 SH3TC1Q8TE82 1336 aa16.99■□□□□ 0.31
ERBB2-220ENST00000584684 GLTPD2A6NH11 291 aa16.99■□□□□ 0.31
ERBB2-220ENST00000584684 FKBP4Q02790 459 aaKnown RBP eCLIP16.99■□□□□ 0.31
ERBB2-220ENST00000584684 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
ERBB2-220ENST00000584684 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
ERBB2-220ENST00000584684 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
ERBB2-220ENST00000584684 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
ERBB2-220ENST00000584684 NLRP3Q96P20 1036 aa16.99■□□□□ 0.31
ERBB2-220ENST00000584684 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
ERBB2-220ENST00000584684 ELL2O00472 640 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-220ENST00000584684 TOMM70O94826 608 aa16.98■□□□□ 0.31
ERBB2-220ENST00000584684 TSPYL6Q8N831 410 aa16.98■□□□□ 0.31
ERBB2-220ENST00000584684 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
ERBB2-220ENST00000584684 PSMD1Q99460 953 aa16.98■□□□□ 0.31
ERBB2-220ENST00000584684 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
ERBB2-220ENST00000584684 FANCIQ9NVI1 1328 aa16.97■□□□□ 0.31
ERBB2-220ENST00000584684 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
ERBB2-220ENST00000584684 SENP3-EIF4A1A0A087X0R7 540 aa16.96■□□□□ 0.31
ERBB2-220ENST00000584684 PHAXQ9H814 394 aaKnown RBP16.96■□□□□ 0.31
ERBB2-220ENST00000584684 PPEF1O14829 653 aaPredicted RBP16.95■□□□□ 0.3
ERBB2-220ENST00000584684 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
ERBB2-220ENST00000584684 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
ERBB2-220ENST00000584684 OLFM4Q6UX06 510 aa16.95■□□□□ 0.3
ERBB2-220ENST00000584684 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
ERBB2-220ENST00000584684 ABCC4O15439 1325 aa16.95■□□□□ 0.3
ERBB2-220ENST00000584684 HCLS1P14317 486 aaPredicted RBP16.94■□□□□ 0.3
ERBB2-220ENST00000584684 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
ERBB2-220ENST00000584684 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
ERBB2-220ENST00000584684 FAM9BQ8IZU0 186 aa16.94■□□□□ 0.3
ERBB2-220ENST00000584684 STK31Q9BXU1 1019 aa16.94■□□□□ 0.3
ERBB2-220ENST00000584684 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
ERBB2-220ENST00000584684 HSPA6P17066 643 aa16.93■□□□□ 0.3
ERBB2-220ENST00000584684 SYNE4Q8N205 404 aa16.93■□□□□ 0.3
ERBB2-220ENST00000584684 ZNF277Q9NRM2 450 aaPredicted RBP16.93■□□□□ 0.3
ERBB2-220ENST00000584684 ATP6V0A2Q9Y487 856 aa16.93■□□□□ 0.3
ERBB2-220ENST00000584684 ZNF521Q96K83 1311 aa16.93■□□□□ 0.3
ERBB2-220ENST00000584684 SCN4AP35499 1836 aa16.92■□□□□ 0.3
ERBB2-220ENST00000584684 VEGFAP15692 232 aaPredicted RBP16.92■□□□□ 0.3
ERBB2-220ENST00000584684 C16orf71Q8IYS4 520 aaPredicted RBP16.92■□□□□ 0.3
ERBB2-220ENST00000584684 CCDC191Q8NCU4 936 aa16.92■□□□□ 0.3
ERBB2-220ENST00000584684 METTL22Q9BUU2 404 aaPredicted RBP16.92■□□□□ 0.3
ERBB2-220ENST00000584684 RRAGCQ9HB90 399 aa16.92■□□□□ 0.3
ERBB2-220ENST00000584684 COL4A5P29400 1685 aa16.91■□□□□ 0.3
ERBB2-220ENST00000584684 BBOX1O75936 387 aa16.91■□□□□ 0.3
ERBB2-220ENST00000584684 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
ERBB2-220ENST00000584684 IARSP41252 1262 aaKnown RBP16.91■□□□□ 0.3
ERBB2-220ENST00000584684 FSTL1Q12841 308 aa16.91■□□□□ 0.3
ERBB2-220ENST00000584684 SF3B3Q15393 1217 aaKnown RBP16.91■□□□□ 0.3
ERBB2-220ENST00000584684 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
ERBB2-220ENST00000584684 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
ERBB2-220ENST00000584684 FAM89AQ96GI7 184 aa16.91■□□□□ 0.3
ERBB2-220ENST00000584684 MYH16Q9H6N6 1097 aa16.91■□□□□ 0.3
ERBB2-220ENST00000584684 GRAPQ13588 217 aa16.9■□□□□ 0.3
ERBB2-220ENST00000584684 KSR2Q6VAB6 950 aa16.9■□□□□ 0.3
ERBB2-220ENST00000584684 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
ERBB2-220ENST00000584684 GRAPLQ8TC17 118 aaPredicted RBP16.9■□□□□ 0.3
ERBB2-220ENST00000584684 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
ERBB2-220ENST00000584684 MYD88Q99836 296 aa16.9■□□□□ 0.3
ERBB2-220ENST00000584684 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
ERBB2-220ENST00000584684 DUOX1Q9NRD9 1551 aa16.89■□□□□ 0.3
ERBB2-220ENST00000584684 TAF1P21675 1872 aa16.89■□□□□ 0.29
ERBB2-220ENST00000584684 POTECB2RU33 542 aa16.89■□□□□ 0.29
ERBB2-220ENST00000584684 IRS4O14654 1257 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-220ENST00000584684 PCCAP05165 728 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-220ENST00000584684 RTFDC1Q9BY42 306 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-220ENST00000584684 TMX4Q9H1E5 349 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-220ENST00000584684 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
ERBB2-220ENST00000584684 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.29
ERBB2-220ENST00000584684 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
ERBB2-220ENST00000584684 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
ERBB2-220ENST00000584684 FZD9O00144 591 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 725.9 ms