RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 DBF4Q9UBU7 674 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-233ENST00000584186 GLTPD2A6NH11 291 aa17.68■□□□□ 0.42
CDK5RAP3-233ENST00000584186 ZNF853P0CG23 659 aa17.68■□□□□ 0.42
CDK5RAP3-233ENST00000584186 CCDC88AQ3V6T2 1871 aa17.68■□□□□ 0.42
CDK5RAP3-233ENST00000584186 CRY2Q49AN0 593 aa17.68■□□□□ 0.42
CDK5RAP3-233ENST00000584186 HSP90AB3PQ58FF7 597 aa17.68■□□□□ 0.42
CDK5RAP3-233ENST00000584186 TIAM2Q8IVF5 1701 aa17.68■□□□□ 0.42
CDK5RAP3-233ENST00000584186 ARFGEF2Q9Y6D5 1785 aa17.68■□□□□ 0.42
CDK5RAP3-233ENST00000584186 LTBP3Q9NS15 1303 aa17.68■□□□□ 0.42
CDK5RAP3-233ENST00000584186 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
CDK5RAP3-233ENST00000584186 DPY19L2Q6NUT2 758 aa17.67■□□□□ 0.42
CDK5RAP3-233ENST00000584186 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
CDK5RAP3-233ENST00000584186 TCIRG1Q13488 830 aa17.66■□□□□ 0.42
CDK5RAP3-233ENST00000584186 C3orf67Q6ZVT6 689 aa17.66■□□□□ 0.42
CDK5RAP3-233ENST00000584186 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
CDK5RAP3-233ENST00000584186 RTKN2Q8IZC4 609 aa17.66■□□□□ 0.42
CDK5RAP3-233ENST00000584186 NLRP3Q96P20 1036 aa17.66■□□□□ 0.42
CDK5RAP3-233ENST00000584186 ZNF277Q9NRM2 450 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP3-233ENST00000584186 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
CDK5RAP3-233ENST00000584186 ANKRD13DQ6ZTN6 518 aa17.65■□□□□ 0.42
CDK5RAP3-233ENST00000584186 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
CDK5RAP3-233ENST00000584186 RBM46Q8TBY0 533 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-233ENST00000584186 RBM17Q96I25 401 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-233ENST00000584186 HYPKQ9NX55 129 aa17.65■□□□□ 0.42
CDK5RAP3-233ENST00000584186 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-233ENST00000584186 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.42
CDK5RAP3-233ENST00000584186 VEGFAP15692 232 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-233ENST00000584186 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-233ENST00000584186 C8orf58Q8NAV2 365 aa17.64■□□□□ 0.41
CDK5RAP3-233ENST00000584186 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
CDK5RAP3-233ENST00000584186 HCLS1P14317 486 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-233ENST00000584186 SYNE4Q8N205 404 aa17.63■□□□□ 0.41
CDK5RAP3-233ENST00000584186 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-233ENST00000584186 PPEF1O14829 653 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-233ENST00000584186 SLC10A5Q5PT55 438 aa17.62■□□□□ 0.41
CDK5RAP3-233ENST00000584186 CRAMP1Q96RY5 1269 aa17.62■□□□□ 0.41
CDK5RAP3-233ENST00000584186 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-233ENST00000584186 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
CDK5RAP3-233ENST00000584186 ANKRD36CQ5JPF3 1778 aa17.61■□□□□ 0.41
CDK5RAP3-233ENST00000584186 DDNO94850 711 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP3-233ENST00000584186 GOLGA2Q08379 1002 aa17.61■□□□□ 0.41
CDK5RAP3-233ENST00000584186 RIC3Q7Z5B4 369 aa17.61■□□□□ 0.41
CDK5RAP3-233ENST00000584186 SLC51AQ86UW1 340 aa17.61■□□□□ 0.41
CDK5RAP3-233ENST00000584186 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
CDK5RAP3-233ENST00000584186 PHAXQ9H814 394 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-233ENST00000584186 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
CDK5RAP3-233ENST00000584186 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-233ENST00000584186 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-233ENST00000584186 APLP1P51693 650 aa17.6■□□□□ 0.41
CDK5RAP3-233ENST00000584186 FSTL1Q12841 308 aa17.6■□□□□ 0.41
CDK5RAP3-233ENST00000584186 CC2D2BQ6DHV5 1058 aa17.6■□□□□ 0.41
CDK5RAP3-233ENST00000584186 TMX4Q9H1E5 349 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-233ENST00000584186 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
CDK5RAP3-233ENST00000584186 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP3-233ENST00000584186 TSPYL6Q8N831 410 aa17.59■□□□□ 0.41
CDK5RAP3-233ENST00000584186 SMC1BQ8NDV3 1235 aa17.59■□□□□ 0.41
CDK5RAP3-233ENST00000584186 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
CDK5RAP3-233ENST00000584186 ISCA1Q9BUE6 129 aa17.59■□□□□ 0.41
CDK5RAP3-233ENST00000584186 ABCC4O15439 1325 aa17.58■□□□□ 0.4
CDK5RAP3-233ENST00000584186 POTECB2RU33 542 aa17.58■□□□□ 0.4
CDK5RAP3-233ENST00000584186 CCDC30Q5VVM6 783 aa17.58■□□□□ 0.4
CDK5RAP3-233ENST00000584186 PSMD1Q99460 953 aa17.58■□□□□ 0.4
CDK5RAP3-233ENST00000584186 ZNF541Q9H0D2 1346 aa17.57■□□□□ 0.4
CDK5RAP3-233ENST00000584186 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-233ENST00000584186 FAM9BQ8IZU0 186 aa17.57■□□□□ 0.4
CDK5RAP3-233ENST00000584186 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
CDK5RAP3-233ENST00000584186 CHMP4AQ9BY43 222 aa17.57■□□□□ 0.4
CDK5RAP3-233ENST00000584186 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
CDK5RAP3-233ENST00000584186 MYD88Q99836 296 aa17.56■□□□□ 0.4
CDK5RAP3-233ENST00000584186 ATP6V0A2Q9Y487 856 aa17.56■□□□□ 0.4
CDK5RAP3-233ENST00000584186 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
CDK5RAP3-233ENST00000584186 DDX58O95786 925 aaKnown RBP17.55■□□□□ 0.4
CDK5RAP3-233ENST00000584186 HTRA3P83110 453 aa17.55■□□□□ 0.4
CDK5RAP3-233ENST00000584186 LARGE2Q8N3Y3 721 aa17.55■□□□□ 0.4
CDK5RAP3-233ENST00000584186 SNED1Q8TER0 1413 aa17.55■□□□□ 0.4
CDK5RAP3-233ENST00000584186 BBOX1O75936 387 aa17.54■□□□□ 0.4
CDK5RAP3-233ENST00000584186 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
CDK5RAP3-233ENST00000584186 STK31Q9BXU1 1019 aa17.54■□□□□ 0.4
CDK5RAP3-233ENST00000584186 IL16Q14005 1332 aa17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 IQCA1LA6NCM1 817 aa17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 FZD9O00144 591 aa17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 IRS4O14654 1257 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 TRIM28Q13263 835 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 GRAPQ13588 217 aa17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 DPP8Q6V1X1 898 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 GRAPLQ8TC17 118 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 GJA3Q9Y6H8 435 aa17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 LAMB2P55268 1798 aa17.53■□□□□ 0.4
CDK5RAP3-233ENST00000584186 PPIP5K2O43314 1243 aa17.52■□□□□ 0.4
CDK5RAP3-233ENST00000584186 EIF6P56537 245 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-233ENST00000584186 SP8Q8IXZ3 490 aa17.52■□□□□ 0.4
CDK5RAP3-233ENST00000584186 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
CDK5RAP3-233ENST00000584186 MAP3K2Q9Y2U5 619 aa17.52■□□□□ 0.4
CDK5RAP3-233ENST00000584186 FANCIQ9NVI1 1328 aa17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 AOC3Q16853 763 aa17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 NIM1KQ8IY84 436 aa17.51■□□□□ 0.39
CDK5RAP3-233ENST00000584186 MPNDQ8N594 471 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms