RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	TNN	Q9UQP3	1299 aa		12.68	□□□□□ -0.38
EIF4A1-231	ENST00000584054		H7C1W4	665 aa		12.67	□□□□□ -0.38
EIF4A1-231	ENST00000584054	MS4A1	P11836	297 aa		12.67	□□□□□ -0.38
EIF4A1-231	ENST00000584054	PTGER2	P43116	358 aa		12.67	□□□□□ -0.38
EIF4A1-231	ENST00000584054	CCT4	P50991	539 aa	Known RBP	12.67	□□□□□ -0.38
EIF4A1-231	ENST00000584054	SLC10A5	Q5PT55	438 aa		12.67	□□□□□ -0.38
EIF4A1-231	ENST00000584054	DZIP1L	Q8IYY4	767 aa	Known RBP	12.67	□□□□□ -0.38
EIF4A1-231	ENST00000584054		U3KPZ7	1027 aa	Predicted RBP	12.67	□□□□□ -0.38
EIF4A1-231	ENST00000584054	RIC1	Q4ADV7	1423 aa		12.67	□□□□□ -0.38
EIF4A1-231	ENST00000584054	KLRG2	A4D1S0	409 aa	Predicted RBP	12.66	□□□□□ -0.38
EIF4A1-231	ENST00000584054	NTSR2	O95665	410 aa		12.66	□□□□□ -0.38
EIF4A1-231	ENST00000584054	GCKR	Q14397	625 aa		12.66	□□□□□ -0.38
EIF4A1-231	ENST00000584054	SUSD4	Q5VX71	490 aa		12.66	□□□□□ -0.38
EIF4A1-231	ENST00000584054	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.66	□□□□□ -0.38
EIF4A1-231	ENST00000584054	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.66	□□□□□ -0.38
EIF4A1-231	ENST00000584054	CARMIL3	Q8ND23	1372 aa		12.66	□□□□□ -0.38
EIF4A1-231	ENST00000584054	PLIN1	O60240	522 aa		12.65	□□□□□ -0.38
EIF4A1-231	ENST00000584054	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.65	□□□□□ -0.38
EIF4A1-231	ENST00000584054	SETDB2	Q96T68	719 aa		12.65	□□□□□ -0.38
EIF4A1-231	ENST00000584054	MYD88	Q99836	296 aa		12.65	□□□□□ -0.38
EIF4A1-231	ENST00000584054	SRCIN1	Q9C0H9	1055 aa		12.65	□□□□□ -0.38
EIF4A1-231	ENST00000584054	USP44	Q9H0E7	712 aa		12.65	□□□□□ -0.38
EIF4A1-231	ENST00000584054	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.65	□□□□□ -0.38
EIF4A1-231	ENST00000584054	CDHR2	Q9BYE9	1310 aa		12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	PSD	A5PKW4	1024 aa	Predicted RBP	12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ATP5J2-PTCD1	G3V325	749 aa		12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ZBTB7B	O15156	539 aa	Predicted RBP	12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	PCCA	P05165	728 aa	Predicted RBP	12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	NEXN	Q0ZGT2	675 aa		12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	CWF19L2	Q2TBE0	894 aa	Known RBP	12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	C20orf194	Q5TEA3	1177 aa		12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	TMEM57	Q8N5G2	664 aa		12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	FRAT1	Q92837	279 aa	Predicted RBP	12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	PLA2G12B	Q9BX93	195 aa		12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	CWC25	Q9NXE8	425 aa	Predicted RBP	12.64	□□□□□ -0.39
EIF4A1-231	ENST00000584054	SERPINB2	P05120	415 aa		12.63	□□□□□ -0.39
EIF4A1-231	ENST00000584054	MMP10	P09238	476 aa		12.63	□□□□□ -0.39
EIF4A1-231	ENST00000584054	PPP1R42	Q7Z4L9	355 aa		12.63	□□□□□ -0.39
EIF4A1-231	ENST00000584054	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.63	□□□□□ -0.39
EIF4A1-231	ENST00000584054	GRM8	O00222	908 aa		12.62	□□□□□ -0.39
EIF4A1-231	ENST00000584054	MVP	Q14764	893 aa	Known RBP	12.62	□□□□□ -0.39
EIF4A1-231	ENST00000584054	PRR5L	Q6MZQ0	368 aa		12.62	□□□□□ -0.39
EIF4A1-231	ENST00000584054	TPTE2	Q6XPS3	522 aa		12.62	□□□□□ -0.39
EIF4A1-231	ENST00000584054	PANK1	Q8TE04	598 aa		12.62	□□□□□ -0.39
EIF4A1-231	ENST00000584054	KAZALD1	Q96I82	304 aa		12.62	□□□□□ -0.39
EIF4A1-231	ENST00000584054	UTP14A	Q9BVJ6	771 aa	Known RBP	12.62	□□□□□ -0.39
EIF4A1-231	ENST00000584054	NYX	Q9GZU5	481 aa		12.62	□□□□□ -0.39
EIF4A1-231	ENST00000584054	AFDN	P55196	1824 aa	Known RBP	12.61	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ZBTB7A	O95365	584 aa		12.61	□□□□□ -0.39
EIF4A1-231	ENST00000584054	GPT	P24298	496 aa		12.61	□□□□□ -0.39
EIF4A1-231	ENST00000584054	TPRN	Q4KMQ1	711 aa		12.61	□□□□□ -0.39
EIF4A1-231	ENST00000584054	CLUAP1	Q96AJ1	413 aa		12.61	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ARX	Q96QS3	562 aa		12.61	□□□□□ -0.39
EIF4A1-231	ENST00000584054	C10orf71	Q711Q0	1435 aa		12.61	□□□□□ -0.39
EIF4A1-231	ENST00000584054	SH3TC1	Q8TE82	1336 aa		12.61	□□□□□ -0.39
EIF4A1-231	ENST00000584054	KIF13B	Q9NQT8	1826 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	CSF1R	P07333	972 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	RABL6	Q3YEC7	729 aa	Predicted RBP	12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	CRY2	Q49AN0	593 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	MSL1	Q68DK7	614 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	SLC4A10	Q6U841	1118 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	SYNE4	Q8N205	404 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	BRIP1	Q9BX63	1249 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	SPON1	Q9HCB6	807 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ZBTB40	Q9NUA8	1239 aa		12.6	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ABCC12	Q96J65	1359 aa		12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	FOXO4	P98177	505 aa		12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	SF3B3	Q15393	1217 aa	Known RBP	12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ERFE	Q4G0M1	354 aa		12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	FAM89A	Q96GI7	184 aa		12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	MEIS3	Q99687	375 aa		12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	TRMT112	Q9UI30	125 aa	Known RBP	12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	DDX19B	Q9UMR2	479 aa		12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	PARP3	Q9Y6F1	533 aa		12.59	□□□□□ -0.39
EIF4A1-231	ENST00000584054	RTL9	Q8NET4	1388 aa		12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	GNAI3	P08754	354 aa		12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	MTX1	Q13505	466 aa		12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	AAMP	Q13685	434 aa		12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	BICDL1	Q6ZP65	573 aa		12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	FTSJ3	Q8IY81	847 aa	Known RBP	12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	PDZRN3	Q9UPQ7	1066 aa		12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	LAMB2	P55268	1798 aa		12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	LRP5	O75197	1615 aa		12.58	□□□□□ -0.4
EIF4A1-231	ENST00000584054	DDX60	Q8IY21	1712 aa	Known RBP	12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	IRS4	O14654	1257 aa	Predicted RBP	12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	POLD1	P28340	1107 aa		12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	HOXA10	P31260	410 aa	Predicted RBP	12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	EPHA10	Q5JZY3	1008 aa		12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	NUTM1	Q86Y26	1132 aa		12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	CNBD1	Q8NA66	436 aa		12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	COG6	Q9Y2V7	657 aa		12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	CD2AP	Q9Y5K6	639 aa		12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	ANKRD31	Q8N7Z5	1873 aa		12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	KIAA1551	Q9HCM1	1747 aa		12.57	□□□□□ -0.4
EIF4A1-231	ENST00000584054	PDE8A	O60658	829 aa		12.56	□□□□□ -0.4
EIF4A1-231	ENST00000584054	HSP90B1	P14625	803 aa	Known RBP	12.56	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms