RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 GRNP28799 593 aaKnown RBP7.12□□□□□ -1.27
VAPA-206ENST00000583475 INPP5BP32019 993 aa7.12□□□□□ -1.27
VAPA-206ENST00000583475 FAM26DQ5JW98 314 aa7.12□□□□□ -1.27
VAPA-206ENST00000583475 GOLGA6L1Q8N7Z2 621 aa7.12□□□□□ -1.27
VAPA-206ENST00000583475 GALNT6Q8NCL4 622 aa7.12□□□□□ -1.27
VAPA-206ENST00000583475 AVENQ9NQS1 362 aaPredicted RBP7.12□□□□□ -1.27
VAPA-206ENST00000583475 PRR12Q9ULL5 1215 aa7.12□□□□□ -1.27
VAPA-206ENST00000583475 DNMT3AQ9Y6K1 912 aaPredicted RBP7.12□□□□□ -1.27
VAPA-206ENST00000583475 NEURL1BA8MQ27 555 aa7.11□□□□□ -1.27
VAPA-206ENST00000583475 TNFRSF10BO14763 440 aa7.11□□□□□ -1.27
VAPA-206ENST00000583475 IDH3AP50213 366 aa7.11□□□□□ -1.27
VAPA-206ENST00000583475 PCBP4P57723 403 aaKnown RBP7.11□□□□□ -1.27
VAPA-206ENST00000583475 MAP3K10Q02779 954 aa7.11□□□□□ -1.27
VAPA-206ENST00000583475 SPEM2Q0P670 501 aa7.11□□□□□ -1.27
VAPA-206ENST00000583475 ZNF468Q5VIY5 522 aaPredicted RBP7.11□□□□□ -1.27
VAPA-206ENST00000583475 EDARADDQ8WWZ3 215 aa7.11□□□□□ -1.27
VAPA-206ENST00000583475 USTQ9Y2C2 406 aa7.11□□□□□ -1.27
VAPA-206ENST00000583475 SHISA8B8ZZ34 492 aa7.1□□□□□ -1.27
VAPA-206ENST00000583475 BRD2P25440 801 aaKnown RBP7.1□□□□□ -1.27
VAPA-206ENST00000583475 SLCO4C1Q6ZQN7 724 aa7.1□□□□□ -1.27
VAPA-206ENST00000583475 SYT9Q86SS6 491 aa7.1□□□□□ -1.27
VAPA-206ENST00000583475 TREML1Q86YW5 311 aa7.1□□□□□ -1.27
VAPA-206ENST00000583475 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
VAPA-206ENST00000583475 ENAMQ9NRM1 1142 aa7.1□□□□□ -1.27
VAPA-206ENST00000583475 EPXP11678 715 aa7.09□□□□□ -1.27
VAPA-206ENST00000583475 ADH6P28332 368 aa7.09□□□□□ -1.27
VAPA-206ENST00000583475 FCHSD1Q86WN1 690 aa7.09□□□□□ -1.27
VAPA-206ENST00000583475 RETREG2Q8NC44 543 aa7.09□□□□□ -1.27
VAPA-206ENST00000583475 GSX2Q9BZM3 304 aa7.09□□□□□ -1.27
VAPA-206ENST00000583475 ARSDP51689 593 aa7.08□□□□□ -1.28
VAPA-206ENST00000583475 BTBD6Q96KE9 485 aa7.08□□□□□ -1.28
VAPA-206ENST00000583475 MDFIQ99750 246 aa7.08□□□□□ -1.28
VAPA-206ENST00000583475 STIM2Q9P246 746 aa7.08□□□□□ -1.28
VAPA-206ENST00000583475 USP20Q9Y2K6 914 aa7.08□□□□□ -1.28
VAPA-206ENST00000583475 ZBTB39O15060 712 aa7.07□□□□□ -1.28
VAPA-206ENST00000583475 SIN3BO75182 1162 aa7.07□□□□□ -1.28
VAPA-206ENST00000583475 CCINQ13939 588 aa7.07□□□□□ -1.28
VAPA-206ENST00000583475 RAB44Q7Z6P3 723 aaPredicted RBP7.07□□□□□ -1.28
VAPA-206ENST00000583475 NEDD1Q8NHV4 660 aa7.07□□□□□ -1.28
VAPA-206ENST00000583475 RTCBQ9Y3I0 505 aaKnown RBP7.07□□□□□ -1.28
VAPA-206ENST00000583475 EPB42P16452 691 aa7.06□□□□□ -1.28
VAPA-206ENST00000583475 HOXB4P17483 251 aaPredicted RBP7.06□□□□□ -1.28
VAPA-206ENST00000583475 GTF3C2Q8WUA4 911 aaPredicted RBP7.06□□□□□ -1.28
VAPA-206ENST00000583475 BHMTQ93088 406 aa7.06□□□□□ -1.28
VAPA-206ENST00000583475 C11orf16Q9NQ32 467 aa7.06□□□□□ -1.28
VAPA-206ENST00000583475 ADARB2-AS1A8MUL3 147 aa7.05□□□□□ -1.28
VAPA-206ENST00000583475 MARSP56192 900 aaKnown RBP7.05□□□□□ -1.28
VAPA-206ENST00000583475 RGL4Q8IZJ4 473 aa7.05□□□□□ -1.28
VAPA-206ENST00000583475 TNFRSF25Q93038 417 aa7.05□□□□□ -1.28
VAPA-206ENST00000583475 EFCC1Q9HA90 598 aa7.05□□□□□ -1.28
VAPA-206ENST00000583475 CNTNAP5Q8WYK1 1306 aa7.04□□□□□ -1.28
VAPA-206ENST00000583475 ELOA3CA0A087WX78 387 aaPredicted RBP7.04□□□□□ -1.28
VAPA-206ENST00000583475 ELOA3DA6NLF2 546 aaPredicted RBP7.04□□□□□ -1.28
VAPA-206ENST00000583475 EGFRP00533 1210 aa7.04□□□□□ -1.28
VAPA-206ENST00000583475 TARSP26639 723 aaKnown RBP7.04□□□□□ -1.28
VAPA-206ENST00000583475 SNRPNP63162 240 aaKnown RBP7.04□□□□□ -1.28
VAPA-206ENST00000583475 NEUROD1Q13562 356 aa7.04□□□□□ -1.28
VAPA-206ENST00000583475 ELOA3BQ3SY89 546 aa7.04□□□□□ -1.28
VAPA-206ENST00000583475 CMTR1Q8N1G2 835 aaKnown RBP7.04□□□□□ -1.28
VAPA-206ENST00000583475 ELOA3Q8NG57 546 aa7.04□□□□□ -1.28
VAPA-206ENST00000583475 HELQQ8TDG4 1101 aa7.04□□□□□ -1.28
VAPA-206ENST00000583475 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.04□□□□□ -1.28
VAPA-206ENST00000583475 KCNMB2Q9Y691 235 aa7.04□□□□□ -1.28
VAPA-206ENST00000583475 SASH3O75995 380 aa7.03□□□□□ -1.28
VAPA-206ENST00000583475 ZAP70P43403 619 aa7.03□□□□□ -1.28
VAPA-206ENST00000583475 GSK3AP49840 483 aa7.03□□□□□ -1.28
VAPA-206ENST00000583475 PDE4CQ08493 712 aa7.03□□□□□ -1.28
VAPA-206ENST00000583475 ZFATQ9P243 1243 aa7.03□□□□□ -1.28
VAPA-206ENST00000583475 XYLBO75191 536 aa7.02□□□□□ -1.29
VAPA-206ENST00000583475 NFKB1P19838 968 aa7.02□□□□□ -1.29
VAPA-206ENST00000583475 KCNMA1Q12791 1236 aa7.02□□□□□ -1.29
VAPA-206ENST00000583475 MTMR3Q13615 1198 aa7.02□□□□□ -1.29
VAPA-206ENST00000583475 LINC00114Q6XXX2 140 aa7.02□□□□□ -1.29
VAPA-206ENST00000583475 CHSY3Q70JA7 882 aa7.02□□□□□ -1.29
VAPA-206ENST00000583475 BEND7Q8N7W2 519 aaPredicted RBP7.02□□□□□ -1.29
VAPA-206ENST00000583475 ABTB2Q8N961 1025 aa7.02□□□□□ -1.29
VAPA-206ENST00000583475 SCARF2Q96GP6 870 aaPredicted RBP7.02□□□□□ -1.29
VAPA-206ENST00000583475 MAP3K6O95382 1288 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 NPR3P17342 541 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 ALAS2P22557 587 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 AMPD1P23109 780 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 ARID4AP29374 1257 aaPredicted RBP7.01□□□□□ -1.29
VAPA-206ENST00000583475 KRT25Q7Z3Z0 450 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 ATCAYQ86WG3 371 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 GPR152Q8TDT2 470 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 PIK3R5Q8WYR1 880 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 PNMA5Q96PV4 448 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 RRAGCQ9HB90 399 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 STARD13Q9Y3M8 1113 aa7.01□□□□□ -1.29
VAPA-206ENST00000583475 ADH7P40394 386 aa7□□□□□ -1.29
VAPA-206ENST00000583475 FKBP4Q02790 459 aaKnown RBP eCLIP7□□□□□ -1.29
VAPA-206ENST00000583475 TRIP4Q15650 581 aaPredicted RBP7□□□□□ -1.29
VAPA-206ENST00000583475 NOM1Q5C9Z4 860 aaKnown RBP7□□□□□ -1.29
VAPA-206ENST00000583475 B4GALNT3Q6L9W6 998 aa7□□□□□ -1.29
VAPA-206ENST00000583475 IGFLR1Q9H665 355 aa7□□□□□ -1.29
VAPA-206ENST00000583475 FAM13BQ9NYF5 915 aa7□□□□□ -1.29
VAPA-206ENST00000583475 MTMR7Q9Y216 660 aa7□□□□□ -1.29
VAPA-206ENST00000583475 ZBTB42B2RXF5 422 aa6.99□□□□□ -1.29
VAPA-206ENST00000583475 MPSTP25325 297 aa6.99□□□□□ -1.29
VAPA-206ENST00000583475 IRS1P35568 1242 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms