RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, human

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA3-213	ENST00000582486	TRIM28	Q13263	835 aa	Known RBP	13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	ITPK1	Q13572	414 aa		13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	INTS5	Q6P9B9	1019 aa	Known RBP	13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	COPRS	Q9NQ92	184 aa		13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	AFF2	P51816	1311 aa		13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	AOX1	Q06278	1338 aa		13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	TRIM6-TRIM34	B2RNG4	842 aa		13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	CRKL	P46109	303 aa	Known RBP	13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	PI4K2B	Q8TCG2	481 aa		13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	GJD4	Q96KN9	370 aa	Predicted RBP	13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	TBC1D2B	Q9UPU7	963 aa		13.74	□□□□□ -0.21
GGA3-213	ENST00000582486	RBM25	P49756	843 aa	Known RBP	13.73	□□□□□ -0.21
GGA3-213	ENST00000582486	CASC1	Q6TDU7	716 aa		13.73	□□□□□ -0.21
GGA3-213	ENST00000582486	DZIP3	Q86Y13	1208 aa	Known RBP	13.73	□□□□□ -0.21
GGA3-213	ENST00000582486	SMARCC1	Q92922	1105 aa	Predicted RBP	13.73	□□□□□ -0.21
GGA3-213	ENST00000582486	RILPL2	Q969X0	211 aa		13.73	□□□□□ -0.21
GGA3-213	ENST00000582486	CHMP3	Q9Y3E7	222 aa		13.73	□□□□□ -0.21
GGA3-213	ENST00000582486	PTF1A	Q7RTS3	328 aa		13.73	□□□□□ -0.21
GGA3-213	ENST00000582486	CCDC87	Q9NVE4	849 aa		13.73	□□□□□ -0.21
GGA3-213	ENST00000582486	IFIT2	P09913	472 aa	Known RBP	13.72	□□□□□ -0.21
GGA3-213	ENST00000582486	GPT	P24298	496 aa		13.72	□□□□□ -0.21
GGA3-213	ENST00000582486	EIF5	P55010	431 aa	Known RBP	13.72	□□□□□ -0.21
GGA3-213	ENST00000582486	FAM182B	Q5T319	152 aa		13.72	□□□□□ -0.21
GGA3-213	ENST00000582486	AACS	Q86V21	672 aa		13.72	□□□□□ -0.21
GGA3-213	ENST00000582486	FAM89A	Q96GI7	184 aa		13.72	□□□□□ -0.21
GGA3-213	ENST00000582486	EAF2	Q96CJ1	260 aa	Predicted RBP	13.72	□□□□□ -0.21
GGA3-213	ENST00000582486	TUBGCP6	Q96RT7	1819 aa		13.71	□□□□□ -0.21
GGA3-213	ENST00000582486	MAP4K4	O95819	1239 aa	Predicted RBP	13.71	□□□□□ -0.21
GGA3-213	ENST00000582486	HSP90AB3P	Q58FF7	597 aa		13.71	□□□□□ -0.21
GGA3-213	ENST00000582486	TTC41P	Q6P2S7	1318 aa		13.71	□□□□□ -0.21
GGA3-213	ENST00000582486	USP42	Q9H9J4	1324 aa	Known RBP	13.71	□□□□□ -0.21
GGA3-213	ENST00000582486	ERVV-1	B6SEH8	477 aa		13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	EIF5B	O60841	1220 aa	Known RBP	13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	PCCA	P05165	728 aa	Predicted RBP	13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	NLRP10	Q86W26	655 aa		13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	THSD7A	Q9UPZ6	1657 aa		13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	SYNE4	Q8N205	404 aa		13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	ECHDC1	Q9NTX5	307 aa		13.7	□□□□□ -0.22
GGA3-213	ENST00000582486	GLRX3	O76003	335 aa	Known RBP	13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	BECN1	Q14457	450 aa		13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	TRPC5	Q9UL62	973 aa	Predicted RBP	13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	MYH14	Q7Z406	1995 aa	Known RBP	13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	ERC2	O15083	957 aa		13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	CHML	P26374	656 aa		13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	KCNQ4	P56696	695 aa		13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	TFCP2	Q12800	502 aa		13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	USP26	Q9BXU7	913 aa		13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	TLR7	Q9NYK1	1049 aa	Known RBP	13.69	□□□□□ -0.22
GGA3-213	ENST00000582486	GPATCH3	Q96I76	525 aa		13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	KIF2C	Q99661	725 aa		13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	TBC1D2	Q9BYX2	928 aa		13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	ATRN	O75882	1429 aa		13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	NUP98	P52948	1817 aa		13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	ONECUT3	O60422	494 aa	Predicted RBP	13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	LINC00116	Q8NCU8	138 aa		13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	ZNF594	Q96JF6	807 aa	Predicted RBP	13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	PLA2G12B	Q9BX93	195 aa		13.68	□□□□□ -0.22
GGA3-213	ENST00000582486	REC8	O95072	547 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	ZNF34	Q8IZ26	560 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	CNTROB	Q8N137	903 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	ESYT1	Q9BSJ8	1104 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	TRMT112	Q9UI30	125 aa	Known RBP	13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	EP400	Q96L91	3159 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	UBN2	Q6ZU65	1347 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	TNNI3K	Q59H18	835 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	ATG9A	Q7Z3C6	839 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	SEPT12	Q8IYM1	358 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	QTRT2	Q9H974	415 aa	Known RBP	13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	FPGT-TNNI3K	V9GXZ4	949 aa		13.67	□□□□□ -0.22
GGA3-213	ENST00000582486	CDHR2	Q9BYE9	1310 aa		13.66	□□□□□ -0.22
GGA3-213	ENST00000582486	CIC	Q96RK0	1608 aa	Predicted RBP	13.66	□□□□□ -0.22
GGA3-213	ENST00000582486	CAMTA2	O94983	1202 aa		13.66	□□□□□ -0.22
GGA3-213	ENST00000582486	CCDC57	Q2TAC2	916 aa		13.66	□□□□□ -0.22
GGA3-213	ENST00000582486	CSF1R	P07333	972 aa		13.65	□□□□□ -0.22
GGA3-213	ENST00000582486	LRRC24	Q50LG9	513 aa		13.65	□□□□□ -0.22
GGA3-213	ENST00000582486	RREB1	Q92766	1687 aa		13.65	□□□□□ -0.22
GGA3-213	ENST00000582486	ANKRD36C	Q5JPF3	1778 aa		13.65	□□□□□ -0.22
GGA3-213	ENST00000582486	EYA2	O00167	538 aa		13.65	□□□□□ -0.22
GGA3-213	ENST00000582486	IRS4	O14654	1257 aa	Predicted RBP	13.65	□□□□□ -0.22
GGA3-213	ENST00000582486	DBNL	Q9UJU6	430 aa	Known RBP	13.65	□□□□□ -0.22
GGA3-213	ENST00000582486	IL15	P40933	162 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA3-213	ENST00000582486	PUS3	Q9BZE2	481 aa	Known RBP	13.64	□□□□□ -0.23
GGA3-213	ENST00000582486	COL5A3	P25940	1745 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA3-213	ENST00000582486	SUSD4	Q5VX71	490 aa		13.64	□□□□□ -0.23
GGA3-213	ENST00000582486	IL25	Q9H293	177 aa		13.64	□□□□□ -0.23
GGA3-213	ENST00000582486	BOLA2	Q9H3K6	86 aa		13.64	□□□□□ -0.23
GGA3-213	ENST00000582486	BTAF1	O14981	1849 aa		13.64	□□□□□ -0.23
GGA3-213	ENST00000582486	AK9	Q5TCS8	1911 aa		13.64	□□□□□ -0.23
GGA3-213	ENST00000582486	FAM177B	A6PVY3	158 aa		13.63	□□□□□ -0.23
GGA3-213	ENST00000582486	IFIT5	Q13325	482 aa	Known RBP	13.63	□□□□□ -0.23
GGA3-213	ENST00000582486	TTLL11	Q8NHH1	800 aa		13.63	□□□□□ -0.23
GGA3-213	ENST00000582486	ZNF831	Q5JPB2	1677 aa		13.63	□□□□□ -0.23
GGA3-213	ENST00000582486	CIAO1	O76071	339 aa		13.63	□□□□□ -0.23
GGA3-213	ENST00000582486	CTSW	P56202	376 aa		13.63	□□□□□ -0.23
GGA3-213	ENST00000582486	DBNDD2	Q9BQY9	259 aa		13.63	□□□□□ -0.23
GGA3-213	ENST00000582486	NHS	Q6T4R5	1651 aa		13.62	□□□□□ -0.23
GGA3-213	ENST00000582486	SMIM5	Q71RC9	77 aa		13.62	□□□□□ -0.23

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