RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
CDK5RAP3-223ENST00000582114 MYBBP1AQ9BQG0 1328 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-223ENST00000582114 IQCA1LA6NCM1 817 aa15.26■□□□□ 0.03
CDK5RAP3-223ENST00000582114 AIMP1Q12904 312 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-223ENST00000582114 KRT24Q2M2I5 525 aa15.26■□□□□ 0.03
CDK5RAP3-223ENST00000582114 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
CDK5RAP3-223ENST00000582114 L3MBTL3Q96JM7 780 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-223ENST00000582114 TAF1DQ9H5J8 278 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP3-223ENST00000582114 IBTKQ9P2D0 1353 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-223ENST00000582114 RNF123Q5XPI4 1314 aa15.25■□□□□ 0.03
CDK5RAP3-223ENST00000582114 LMOD3Q0VAK6 560 aa15.25■□□□□ 0.03
CDK5RAP3-223ENST00000582114 COL13A1Q5TAT6 717 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-223ENST00000582114 PPP1R42Q7Z4L9 355 aa15.25■□□□□ 0.03
CDK5RAP3-223ENST00000582114 SNED1Q8TER0 1413 aa15.25■□□□□ 0.03
CDK5RAP3-223ENST00000582114 PPEF1O14829 653 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 COPS6Q7L5N1 327 aa15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 LDHDQ86WU2 507 aa15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 RBM17Q96I25 401 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 MKRN1Q9UHC7 482 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 CLEC11AQ9Y240 323 aa15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 SCN4AP35499 1836 aa15.24■□□□□ 0.03
CDK5RAP3-223ENST00000582114 COL4A5P29400 1685 aa15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 FZD9O00144 591 aa15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 HSPA1AP0DMV8 641 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 HSPA1BP0DMV9 641 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 HOXA10P31260 410 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 EPHX2P34913 555 aa15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 PSMD1Q99460 953 aa15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 UTP14AQ9BVJ6 771 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 HACL1Q9UJ83 578 aa15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 GJA3Q9Y6H8 435 aa15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 RIC1Q4ADV7 1423 aa15.23■□□□□ 0.03
CDK5RAP3-223ENST00000582114 PARP10Q53GL7 1025 aa15.22■□□□□ 0.03
CDK5RAP3-223ENST00000582114 RUNDC1Q96C34 613 aa15.22■□□□□ 0.03
CDK5RAP3-223ENST00000582114 NLRP3Q96P20 1036 aa15.22■□□□□ 0.03
CDK5RAP3-223ENST00000582114 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
CDK5RAP3-223ENST00000582114 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
CDK5RAP3-223ENST00000582114 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
CDK5RAP3-223ENST00000582114 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
CDK5RAP3-223ENST00000582114 HCLS1P14317 486 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-223ENST00000582114 LARGE2Q8N3Y3 721 aa15.21■□□□□ 0.03
CDK5RAP3-223ENST00000582114 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
CDK5RAP3-223ENST00000582114 ABCC4O15439 1325 aa15.2■□□□□ 0.02
CDK5RAP3-223ENST00000582114 EIF6P56537 245 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-223ENST00000582114 MAP1SQ66K74 1059 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-223ENST00000582114 CC2D2BQ6DHV5 1058 aa15.2■□□□□ 0.02
CDK5RAP3-223ENST00000582114 GPC2Q8N158 579 aa15.2■□□□□ 0.02
CDK5RAP3-223ENST00000582114 CHPF2Q9P2E5 772 aa15.2■□□□□ 0.02
CDK5RAP3-223ENST00000582114 PASKQ96RG2 1323 aa15.19■□□□□ 0.02
CDK5RAP3-223ENST00000582114 ANKRD36CQ5JPF3 1778 aa15.19■□□□□ 0.02
CDK5RAP3-223ENST00000582114 CHL1O00533 1208 aa15.19■□□□□ 0.02
CDK5RAP3-223ENST00000582114 AOC3Q16853 763 aa15.19■□□□□ 0.02
CDK5RAP3-223ENST00000582114 NLRP10Q86W26 655 aa15.19■□□□□ 0.02
CDK5RAP3-223ENST00000582114 DDX21Q9NR30 783 aaKnown RBP eCLIP15.19■□□□□ 0.02
CDK5RAP3-223ENST00000582114 PPIP5K2O43314 1243 aa15.18■□□□□ 0.02
CDK5RAP3-223ENST00000582114 CAPN15O75808 1086 aa15.18■□□□□ 0.02
CDK5RAP3-223ENST00000582114 ITGBL1O95965 494 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-223ENST00000582114 HSP90AB3PQ58FF7 597 aa15.18■□□□□ 0.02
CDK5RAP3-223ENST00000582114 SLC10A5Q5PT55 438 aa15.18■□□□□ 0.02
CDK5RAP3-223ENST00000582114 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
CDK5RAP3-223ENST00000582114 TRMT112Q9UI30 125 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-223ENST00000582114 LAMB2P55268 1798 aa15.18■□□□□ 0.02
CDK5RAP3-223ENST00000582114 LTBP1Q14766 1721 aa15.17■□□□□ 0.02
CDK5RAP3-223ENST00000582114 ADAMTSL1Q8N6G6 1762 aa15.17■□□□□ 0.02
CDK5RAP3-223ENST00000582114 EPS15P42566 896 aa15.17■□□□□ 0.02
CDK5RAP3-223ENST00000582114 TCIRG1Q13488 830 aa15.17■□□□□ 0.02
CDK5RAP3-223ENST00000582114 PNMA8AQ86V59 439 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-223ENST00000582114 NIM1KQ8IY84 436 aa15.17■□□□□ 0.02
CDK5RAP3-223ENST00000582114 TMX4Q9H1E5 349 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-223ENST00000582114 ATP6V0A2Q9Y487 856 aa15.17■□□□□ 0.02
CDK5RAP3-223ENST00000582114 CNTNAP1P78357 1384 aa15.16■□□□□ 0.02
CDK5RAP3-223ENST00000582114 TMEM88BA6NKF7 163 aa15.16■□□□□ 0.02
CDK5RAP3-223ENST00000582114 LMOD1P29536 600 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-223ENST00000582114 SCNN1DP51172 638 aa15.16■□□□□ 0.02
CDK5RAP3-223ENST00000582114 GRIPAP1Q4V328 841 aa15.16■□□□□ 0.02
CDK5RAP3-223ENST00000582114 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
CDK5RAP3-223ENST00000582114 CNTROBQ8N137 903 aa15.16■□□□□ 0.02
CDK5RAP3-223ENST00000582114 SH3TC1Q8TE82 1336 aa15.16■□□□□ 0.02
CDK5RAP3-223ENST00000582114 TAF1P21675 1872 aa15.15■□□□□ 0.02
CDK5RAP3-223ENST00000582114 ATP5J2-PTCD1G3V325 749 aa15.15■□□□□ 0.02
CDK5RAP3-223ENST00000582114 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP3-223ENST00000582114 DDX46Q7L014 1031 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP3-223ENST00000582114 VEGFBP49765 207 aa15.14■□□□□ 0.01
CDK5RAP3-223ENST00000582114 FMR1Q06787 632 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDK5RAP3-223ENST00000582114 DUSP27Q5VZP5 1158 aa15.14■□□□□ 0.01
CDK5RAP3-223ENST00000582114 DPP8Q6V1X1 898 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-223ENST00000582114 PRKRIP1Q9H875 184 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-223ENST00000582114 MBIPQ9NS73 344 aa15.14■□□□□ 0.01
CDK5RAP3-223ENST00000582114 BBOX1O75936 387 aa15.13■□□□□ 0.01
CDK5RAP3-223ENST00000582114 GRAPQ13588 217 aa15.13■□□□□ 0.01
CDK5RAP3-223ENST00000582114 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
CDK5RAP3-223ENST00000582114 PLBD2Q8NHP8 589 aa15.13■□□□□ 0.01
CDK5RAP3-223ENST00000582114 GRAPLQ8TC17 118 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-223ENST00000582114 FAM89AQ96GI7 184 aa15.13■□□□□ 0.01
CDK5RAP3-223ENST00000582114 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
CDK5RAP3-223ENST00000582114 DBF4Q9UBU7 674 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-223ENST00000582114 ELL2O00472 640 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 227.3 ms