RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
CDK5RAP3-222ENST00000581708 CCDC93Q567U6 631 aa16.29■□□□□ 0.2
CDK5RAP3-222ENST00000581708 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
CDK5RAP3-222ENST00000581708 WWC1Q8IX03 1113 aa16.29■□□□□ 0.2
CDK5RAP3-222ENST00000581708 RTKN2Q8IZC4 609 aa16.29■□□□□ 0.2
CDK5RAP3-222ENST00000581708 ABCC12Q96J65 1359 aa16.28■□□□□ 0.2
CDK5RAP3-222ENST00000581708 KIF3CO14782 793 aa16.28■□□□□ 0.2
CDK5RAP3-222ENST00000581708 AIMP1Q12904 312 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP3-222ENST00000581708 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
CDK5RAP3-222ENST00000581708 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
CDK5RAP3-222ENST00000581708 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
CDK5RAP3-222ENST00000581708 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-222ENST00000581708 CCDC30Q5VVM6 783 aa16.27■□□□□ 0.2
CDK5RAP3-222ENST00000581708 NLRP10Q86W26 655 aa16.27■□□□□ 0.2
CDK5RAP3-222ENST00000581708 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.2
CDK5RAP3-222ENST00000581708 DICER1Q9UPY3 1922 aaKnown RBP16.27■□□□□ 0.19
CDK5RAP3-222ENST00000581708 GLTPD2A6NH11 291 aa16.26■□□□□ 0.19
CDK5RAP3-222ENST00000581708 TOMM70O94826 608 aa16.26■□□□□ 0.19
CDK5RAP3-222ENST00000581708 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
CDK5RAP3-222ENST00000581708 RBM17Q96I25 401 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-222ENST00000581708 TNRC6CQ9HCJ0 1690 aaKnown RBP16.26■□□□□ 0.19
CDK5RAP3-222ENST00000581708 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
CDK5RAP3-222ENST00000581708 CACNA1SQ13698 1873 aa16.25■□□□□ 0.19
CDK5RAP3-222ENST00000581708 PRELPP51888 382 aa16.25■□□□□ 0.19
CDK5RAP3-222ENST00000581708 FKBP4Q02790 459 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDK5RAP3-222ENST00000581708 DPY19L2Q6NUT2 758 aa16.25■□□□□ 0.19
CDK5RAP3-222ENST00000581708 C8orf58Q8NAV2 365 aa16.25■□□□□ 0.19
CDK5RAP3-222ENST00000581708 CCDC88AQ3V6T2 1871 aa16.25■□□□□ 0.19
CDK5RAP3-222ENST00000581708 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
CDK5RAP3-222ENST00000581708 PSMD1Q99460 953 aa16.24■□□□□ 0.19
CDK5RAP3-222ENST00000581708 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
CDK5RAP3-222ENST00000581708 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-222ENST00000581708 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-222ENST00000581708 TIAM2Q8IVF5 1701 aa16.24■□□□□ 0.19
CDK5RAP3-222ENST00000581708 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-222ENST00000581708 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-222ENST00000581708 C16orf71Q8IYS4 520 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-222ENST00000581708 RBM46Q8TBY0 533 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-222ENST00000581708 NMRK2Q9NPI5 230 aa16.23■□□□□ 0.19
CDK5RAP3-222ENST00000581708 ELL2O00472 640 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-222ENST00000581708 RIC3Q7Z5B4 369 aa16.22■□□□□ 0.19
CDK5RAP3-222ENST00000581708 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-222ENST00000581708 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
CDK5RAP3-222ENST00000581708 BBOX1O75936 387 aa16.21■□□□□ 0.19
CDK5RAP3-222ENST00000581708 VEGFAP15692 232 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-222ENST00000581708 TMC4Q7Z404 712 aa16.21■□□□□ 0.19
CDK5RAP3-222ENST00000581708 STK31Q9BXU1 1019 aa16.21■□□□□ 0.19
CDK5RAP3-222ENST00000581708 SNED1Q8TER0 1413 aa16.2■□□□□ 0.18
CDK5RAP3-222ENST00000581708 FSTL1Q12841 308 aa16.2■□□□□ 0.18
CDK5RAP3-222ENST00000581708 TWISTNBQ3B726 338 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-222ENST00000581708 TSR2Q969E8 191 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-222ENST00000581708 VPS33BQ9H267 617 aa16.2■□□□□ 0.18
CDK5RAP3-222ENST00000581708 PPEF1O14829 653 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-222ENST00000581708 HSPA6P17066 643 aa16.19■□□□□ 0.18
CDK5RAP3-222ENST00000581708 TSPYL6Q8N831 410 aa16.19■□□□□ 0.18
CDK5RAP3-222ENST00000581708 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
CDK5RAP3-222ENST00000581708 RRAGCQ9HB90 399 aa16.19■□□□□ 0.18
CDK5RAP3-222ENST00000581708 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
CDK5RAP3-222ENST00000581708 CACNA1FO60840 1977 aa16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 SF3B3Q15393 1217 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 FAM9BQ8IZU0 186 aa16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 SYNE4Q8N205 404 aa16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 MYH16Q9H6N6 1097 aa16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 PHAXQ9H814 394 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 FANCIQ9NVI1 1328 aa16.18■□□□□ 0.18
CDK5RAP3-222ENST00000581708 HCLS1P14317 486 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-222ENST00000581708 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-222ENST00000581708 KSR2Q6VAB6 950 aa16.17■□□□□ 0.18
CDK5RAP3-222ENST00000581708 ABCC4O15439 1325 aa16.17■□□□□ 0.18
CDK5RAP3-222ENST00000581708 LAMB2P55268 1798 aa16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 CEP350Q5VT06 3117 aa16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 ATP5J2-PTCD1G3V325 749 aa16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 GRAPQ13588 217 aa16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 SP8Q8IXZ3 490 aa16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 GRAPLQ8TC17 118 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 JDP2Q8WYK2 163 aa16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 FAM89AQ96GI7 184 aa16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 L3MBTL3Q96JM7 780 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 ZNF277Q9NRM2 450 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-222ENST00000581708 IQCA1LA6NCM1 817 aa16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 FZD9O00144 591 aa16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 PCCAP05165 728 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 NEXNQ0ZGT2 675 aa16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 DDX60Q8IY21 1712 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 SMC1BQ8NDV3 1235 aa16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 RTFDC1Q9BY42 306 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 CWC25Q9NXE8 425 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-222ENST00000581708 IRS4O14654 1257 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-222ENST00000581708 SLC4A2P04920 1241 aa16.14■□□□□ 0.17
CDK5RAP3-222ENST00000581708 APLP1P51693 650 aa16.14■□□□□ 0.17
CDK5RAP3-222ENST00000581708 MYD88Q99836 296 aa16.14■□□□□ 0.17
CDK5RAP3-222ENST00000581708 PI4KAP2A4QPH2 592 aa16.13■□□□□ 0.17
CDK5RAP3-222ENST00000581708 VAMP4O75379 141 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 1347.3 ms