RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 RIPK4P57078 832 aa9.16□□□□□ -0.94
TVP23C-208ENST00000581273 R3HCC1Q9Y3T6 440 aaKnown RBP9.16□□□□□ -0.94
TVP23C-208ENST00000581273 C5P01031 1676 aa9.16□□□□□ -0.94
TVP23C-208ENST00000581273 MEGF6O75095 1541 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 TAF1LQ8IZX4 1826 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 A0A0G2JLW4 131 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 FCHSD2O94868 740 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 PHF14O94880 888 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 RRS1Q15050 365 aaKnown RBP9.15□□□□□ -0.94
TVP23C-208ENST00000581273 HABP4Q5JVS0 413 aaKnown RBP9.15□□□□□ -0.94
TVP23C-208ENST00000581273 NBPF6Q5VWK0 638 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 MPRIPQ6WCQ1 1025 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 RAPGEF4Q8WZA2 1011 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 TNPO1Q92973 898 aaKnown RBP9.15□□□□□ -0.94
TVP23C-208ENST00000581273 NBPF4Q96M43 638 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 MFRPQ9BY79 579 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 ZKSCAN5Q9Y2L8 839 aa9.15□□□□□ -0.94
TVP23C-208ENST00000581273 KIAA1551Q9HCM1 1747 aa9.14□□□□□ -0.95
TVP23C-208ENST00000581273 CASP8AP2Q9UKL3 1982 aa9.14□□□□□ -0.95
TVP23C-208ENST00000581273 SEC24BO95487 1268 aa9.14□□□□□ -0.95
TVP23C-208ENST00000581273 VEGFAP15692 232 aaPredicted RBP9.14□□□□□ -0.95
TVP23C-208ENST00000581273 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
TVP23C-208ENST00000581273 SBF1O95248 1867 aa9.14□□□□□ -0.95
TVP23C-208ENST00000581273 ITGB4P16144 1822 aa9.14□□□□□ -0.95
TVP23C-208ENST00000581273 TATP17735 454 aaPredicted RBP9.13□□□□□ -0.95
TVP23C-208ENST00000581273 EVX2Q03828 476 aa9.13□□□□□ -0.95
TVP23C-208ENST00000581273 HDAC1Q13547 482 aaPredicted RBP9.13□□□□□ -0.95
TVP23C-208ENST00000581273 WDR63Q8IWG1 891 aa9.13□□□□□ -0.95
TVP23C-208ENST00000581273 PDLIM2Q96JY6 352 aa9.13□□□□□ -0.95
TVP23C-208ENST00000581273 AK7Q96M32 723 aa9.13□□□□□ -0.95
TVP23C-208ENST00000581273 CWC22Q9HCG8 908 aaKnown RBP9.13□□□□□ -0.95
TVP23C-208ENST00000581273 DDX49Q9Y6V7 483 aaKnown RBP9.13□□□□□ -0.95
TVP23C-208ENST00000581273 A0A0C4DFX4 3053 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 A0A0U1RQG5 324 aaPredicted RBP9.12□□□□□ -0.95
TVP23C-208ENST00000581273 HAX1O00165 279 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 TPM3P06753 285 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 MFAP1P55081 439 aaKnown RBP9.12□□□□□ -0.95
TVP23C-208ENST00000581273 FAM193AP78312 1265 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 KIAA2012Q0VF49 1180 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 FBXO22Q8NEZ5 403 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 FLAD1Q8NFF5 587 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 SYAP1Q96A49 352 aaPredicted RBP9.12□□□□□ -0.95
TVP23C-208ENST00000581273 GGNBP2Q9H3C7 697 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 TRPC6Q9Y210 931 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 PALLDQ8WX93 1383 aa9.12□□□□□ -0.95
TVP23C-208ENST00000581273 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
TVP23C-208ENST00000581273 MBD3O95983 291 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 TIE1P35590 1138 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 CHAF1AQ13111 956 aaPredicted RBP9.11□□□□□ -0.95
TVP23C-208ENST00000581273 AMIGO3Q86WK7 504 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 PDCL2Q8N4E4 241 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 EFCAB3Q8N7B9 438 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 MYRIPQ8NFW9 859 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 TESK2Q96S53 571 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 COG6Q9Y2V7 657 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 C4BP0C0L5 1744 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 UBR3Q6ZT12 1888 aa9.11□□□□□ -0.95
TVP23C-208ENST00000581273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
TVP23C-208ENST00000581273 POTECB2RU33 542 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 MAP2K1Q02750 393 aaPredicted RBP9.1□□□□□ -0.95
TVP23C-208ENST00000581273 DGKZQ13574 1117 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 CCDC27Q2M243 656 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 HSP90AB2PQ58FF8 381 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 CREBRFQ8IUR6 639 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 FAM184AQ8NB25 1140 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 GCC1Q96CN9 775 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 DIAPH3Q9NSV4 1193 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 DDX19BQ9UMR2 479 aa9.1□□□□□ -0.95
TVP23C-208ENST00000581273 BRCA1P38398 1863 aaKnown RBP9.1□□□□□ -0.95
TVP23C-208ENST00000581273 CUL9Q8IWT3 2517 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 PCDH11XQ9BZA7 1347 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 PCDH11YQ9BZA8 1340 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 BCAR3O75815 825 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 POTEIP0CG38 1075 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 POTEJP0CG39 1038 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 DPEP1P16444 411 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 GTF2F1P35269 517 aaKnown RBP eCLIP9.09□□□□□ -0.953e-7■■■■■ 29.2
TVP23C-208ENST00000581273 FXR1P51114 621 aaKnown RBP eCLIP9.09□□□□□ -0.95
TVP23C-208ENST00000581273 MVPQ14764 893 aaKnown RBP9.09□□□□□ -0.95
TVP23C-208ENST00000581273 UVSSAQ2YD98 709 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 ZKSCAN2Q63HK3 967 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 GAS2L3Q86XJ1 694 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 SLC17A8Q8NDX2 589 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 SMARCC1Q92922 1105 aaPredicted RBP9.09□□□□□ -0.95
TVP23C-208ENST00000581273 FEZ1Q99689 392 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 TMEM106CQ9BVX2 250 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 TSPYL1Q9H0U9 437 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 KIF13BQ9NQT8 1826 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 ARFGEF1Q9Y6D6 1849 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 SZT2Q5T011 3432 aa9.09□□□□□ -0.95
TVP23C-208ENST00000581273 TOGARAM1Q9Y4F4 1720 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 PITPNM2Q9BZ72 1349 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 KIF20BQ96Q89 1820 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 CCDC66A2RUB6 948 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 GLTPD2A6NH11 291 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 APAF1O14727 1248 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 FYB1O15117 783 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 CYP27B1O15528 508 aa9.08□□□□□ -0.96
TVP23C-208ENST00000581273 PTMAP06454 111 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms