RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 NUTM1Q86Y26 1132 aa22.03■■□□□ 1.12
CDC42EP4-206ENST00000581014 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
CDC42EP4-206ENST00000581014 SLC10A5Q5PT55 438 aa22.02■■□□□ 1.12
CDC42EP4-206ENST00000581014 HYPKQ9NX55 129 aa22.02■■□□□ 1.12
CDC42EP4-206ENST00000581014 KDM2BQ8NHM5 1336 aa22.02■■□□□ 1.12
CDC42EP4-206ENST00000581014 WDR90Q96KV7 1748 aa22.01■■□□□ 1.11
CDC42EP4-206ENST00000581014 AIMP1Q12904 312 aaKnown RBP22.01■■□□□ 1.11
CDC42EP4-206ENST00000581014 TCIRG1Q13488 830 aa22.01■■□□□ 1.11
CDC42EP4-206ENST00000581014 CHMP4AQ9BY43 222 aa22.01■■□□□ 1.11
CDC42EP4-206ENST00000581014 TAOK3Q9H2K8 898 aa22.01■■□□□ 1.11
CDC42EP4-206ENST00000581014 WWC1Q8IX03 1113 aa22■■□□□ 1.11
CDC42EP4-206ENST00000581014 PLBD2Q8NHP8 589 aa22■■□□□ 1.11
CDC42EP4-206ENST00000581014 UTP14AQ9BVJ6 771 aaKnown RBP22■■□□□ 1.11
CDC42EP4-206ENST00000581014 TOMM70O94826 608 aa21.99■■□□□ 1.11
CDC42EP4-206ENST00000581014 CCDC93Q567U6 631 aa21.99■■□□□ 1.11
CDC42EP4-206ENST00000581014 ANKRD13DQ6ZTN6 518 aa21.99■■□□□ 1.11
CDC42EP4-206ENST00000581014 NLRP10Q86W26 655 aa21.99■■□□□ 1.11
CDC42EP4-206ENST00000581014 ZNF219Q9P2Y4 722 aaPredicted RBP21.99■■□□□ 1.11
CDC42EP4-206ENST00000581014 GLTPD2A6NH11 291 aa21.98■■□□□ 1.11
CDC42EP4-206ENST00000581014 IL16Q14005 1332 aa21.98■■□□□ 1.11
CDC42EP4-206ENST00000581014 RTKN2Q8IZC4 609 aa21.97■■□□□ 1.11
CDC42EP4-206ENST00000581014 C8orf58Q8NAV2 365 aa21.97■■□□□ 1.11
CDC42EP4-206ENST00000581014 CRAMP1Q96RY5 1269 aa21.97■■□□□ 1.11
CDC42EP4-206ENST00000581014 CC2D2BQ6DHV5 1058 aa21.96■■□□□ 1.11
CDC42EP4-206ENST00000581014 NLRP3Q96P20 1036 aa21.96■■□□□ 1.11
CDC42EP4-206ENST00000581014 TRIM28Q13263 835 aaKnown RBP21.95■■□□□ 1.1
CDC42EP4-206ENST00000581014 GRIPAP1Q4V328 841 aa21.95■■□□□ 1.1
CDC42EP4-206ENST00000581014 RPGRQ92834 1020 aaKnown RBP21.95■■□□□ 1.1
CDC42EP4-206ENST00000581014 ISCA1Q9BUE6 129 aa21.95■■□□□ 1.1
CDC42EP4-206ENST00000581014 FKBP4Q02790 459 aaKnown RBP eCLIP21.94■■□□□ 1.1
CDC42EP4-206ENST00000581014 C3orf67Q6ZVT6 689 aa21.94■■□□□ 1.1
CDC42EP4-206ENST00000581014 C16orf71Q8IYS4 520 aaPredicted RBP21.94■■□□□ 1.1
CDC42EP4-206ENST00000581014 RBM17Q96I25 401 aaKnown RBP21.94■■□□□ 1.1
CDC42EP4-206ENST00000581014 ELL2O00472 640 aaPredicted RBP21.93■■□□□ 1.1
CDC42EP4-206ENST00000581014 RBM46Q8TBY0 533 aaKnown RBP21.93■■□□□ 1.1
CDC42EP4-206ENST00000581014 SNED1Q8TER0 1413 aa21.93■■□□□ 1.1
CDC42EP4-206ENST00000581014 TRMT112Q9UI30 125 aaKnown RBP21.93■■□□□ 1.1
CDC42EP4-206ENST00000581014 SH3TC1Q8TE82 1336 aa21.92■■□□□ 1.1
CDC42EP4-206ENST00000581014 CCDC30Q5VVM6 783 aa21.92■■□□□ 1.1
CDC42EP4-206ENST00000581014 DPY19L2Q6NUT2 758 aa21.92■■□□□ 1.1
CDC42EP4-206ENST00000581014 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
CDC42EP4-206ENST00000581014 PSMD1Q99460 953 aa21.92■■□□□ 1.1
CDC42EP4-206ENST00000581014 RRAGCQ9HB90 399 aa21.92■■□□□ 1.1
CDC42EP4-206ENST00000581014 OLFM4Q6UX06 510 aa21.91■■□□□ 1.1
CDC42EP4-206ENST00000581014 ANKRD36CQ5JPF3 1778 aa21.91■■□□□ 1.1
CDC42EP4-206ENST00000581014 VEGFAP15692 232 aaPredicted RBP21.9■■□□□ 1.1
CDC42EP4-206ENST00000581014 TSPYL6Q8N831 410 aa21.9■■□□□ 1.1
CDC42EP4-206ENST00000581014 TSR2Q969E8 191 aaKnown RBP21.9■■□□□ 1.1
CDC42EP4-206ENST00000581014 APLP1P51693 650 aa21.89■■□□□ 1.09
CDC42EP4-206ENST00000581014 GOLGA2Q08379 1002 aa21.89■■□□□ 1.09
CDC42EP4-206ENST00000581014 PHAXQ9H814 394 aaKnown RBP21.89■■□□□ 1.09
CDC42EP4-206ENST00000581014 BBOX1O75936 387 aa21.88■■□□□ 1.09
CDC42EP4-206ENST00000581014 HCLS1P14317 486 aaPredicted RBP21.88■■□□□ 1.09
CDC42EP4-206ENST00000581014 FSTL1Q12841 308 aa21.88■■□□□ 1.09
CDC42EP4-206ENST00000581014 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
CDC42EP4-206ENST00000581014 PPEF1O14829 653 aaPredicted RBP21.87■■□□□ 1.09
CDC42EP4-206ENST00000581014 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
CDC42EP4-206ENST00000581014 ZNF277Q9NRM2 450 aaPredicted RBP21.87■■□□□ 1.09
CDC42EP4-206ENST00000581014 POTECB2RU33 542 aa21.86■■□□□ 1.09
CDC42EP4-206ENST00000581014 ATP5J2-PTCD1G3V325 749 aa21.86■■□□□ 1.09
CDC42EP4-206ENST00000581014 IARSP41252 1262 aaKnown RBP21.86■■□□□ 1.09
CDC42EP4-206ENST00000581014 ATP6V0A2Q9Y487 856 aa21.86■■□□□ 1.09
CDC42EP4-206ENST00000581014 ABCC4O15439 1325 aa21.85■■□□□ 1.09
CDC42EP4-206ENST00000581014 DDX58O95786 925 aaKnown RBP21.85■■□□□ 1.09
CDC42EP4-206ENST00000581014 SF3B3Q15393 1217 aaKnown RBP21.85■■□□□ 1.09
CDC42EP4-206ENST00000581014 TWISTNBQ3B726 338 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP4-206ENST00000581014 CCDC191Q8NCU4 936 aa21.84■■□□□ 1.09
CDC42EP4-206ENST00000581014 FAM89AQ96GI7 184 aa21.84■■□□□ 1.09
CDC42EP4-206ENST00000581014 FANCIQ9NVI1 1328 aa21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 FZD9O00144 591 aa21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 DDX46Q7L014 1031 aaKnown RBP21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 SP8Q8IXZ3 490 aa21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 ZBTB38Q8NAP3 1195 aaPredicted RBP21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 L3MBTL3Q96JM7 780 aaPredicted RBP21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 METTL22Q9BUU2 404 aaPredicted RBP21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 STK31Q9BXU1 1019 aa21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 VPS33BQ9H267 617 aa21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 LAMB2P55268 1798 aa21.83■■□□□ 1.09
CDC42EP4-206ENST00000581014 DDNO94850 711 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP4-206ENST00000581014 GRAPQ13588 217 aa21.82■■□□□ 1.08
CDC42EP4-206ENST00000581014 KSR2Q6VAB6 950 aa21.82■■□□□ 1.08
CDC42EP4-206ENST00000581014 TMC4Q7Z404 712 aa21.82■■□□□ 1.08
CDC42EP4-206ENST00000581014 FAM9BQ8IZU0 186 aa21.82■■□□□ 1.08
CDC42EP4-206ENST00000581014 SMC1BQ8NDV3 1235 aa21.82■■□□□ 1.08
CDC42EP4-206ENST00000581014 GRAPLQ8TC17 118 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP4-206ENST00000581014 TMX4Q9H1E5 349 aaPredicted RBP21.82■■□□□ 1.08
CDC42EP4-206ENST00000581014 HSP90B1P14625 803 aaKnown RBP21.81■■□□□ 1.08
CDC42EP4-206ENST00000581014 RTFDC1Q9BY42 306 aaPredicted RBP21.81■■□□□ 1.08
CDC42EP4-206ENST00000581014 SCN4AP35499 1836 aa21.8■■□□□ 1.08
CDC42EP4-206ENST00000581014 IRS4O14654 1257 aaPredicted RBP21.8■■□□□ 1.08
CDC42EP4-206ENST00000581014 JDP2Q8WYK2 163 aa21.8■■□□□ 1.08
CDC42EP4-206ENST00000581014 MYD88Q99836 296 aa21.8■■□□□ 1.08
CDC42EP4-206ENST00000581014 VAMP4O75379 141 aa21.79■■□□□ 1.08
CDC42EP4-206ENST00000581014 PCCAP05165 728 aaPredicted RBP21.79■■□□□ 1.08
CDC42EP4-206ENST00000581014 CWC25Q9NXE8 425 aaPredicted RBP21.79■■□□□ 1.08
CDC42EP4-206ENST00000581014 MAP3K2Q9Y2U5 619 aa21.79■■□□□ 1.08
CDC42EP4-206ENST00000581014 SALL2Q9Y467 1007 aaPredicted RBP21.79■■□□□ 1.08
CDC42EP4-206ENST00000581014 PI4KAP2A4QPH2 592 aa21.78■■□□□ 1.08
CDC42EP4-206ENST00000581014 IQCA1LA6NCM1 817 aa21.78■■□□□ 1.08
CDC42EP4-206ENST00000581014 SLC4A2P04920 1241 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms