RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ZBTB3Q9H5J0 574 aa23.54■■□□□ 1.36
MKS1-209ENST00000580127 LAMB4A4D0S4 1761 aa23.53■■□□□ 1.36
MKS1-209ENST00000580127 CAPN15O75808 1086 aa23.53■■□□□ 1.36
MKS1-209ENST00000580127 LMOD1P29536 600 aaPredicted RBP23.53■■□□□ 1.36
MKS1-209ENST00000580127 GIGYF2Q6Y7W6 1299 aaKnown RBP23.53■■□□□ 1.36
MKS1-209ENST00000580127 TTLL7Q6ZT98 887 aa23.53■■□□□ 1.36
MKS1-209ENST00000580127 NLRP3Q96P20 1036 aa23.53■■□□□ 1.36
MKS1-209ENST00000580127 PASKQ96RG2 1323 aa23.53■■□□□ 1.36
MKS1-209ENST00000580127 ZNF541Q9H0D2 1346 aa23.53■■□□□ 1.36
MKS1-209ENST00000580127 IBTKQ9P2D0 1353 aaPredicted RBP23.52■■□□□ 1.36
MKS1-209ENST00000580127 ZNF34Q8IZ26 560 aa23.52■■□□□ 1.36
MKS1-209ENST00000580127 AIDAQ96BJ3 306 aa23.52■■□□□ 1.36
MKS1-209ENST00000580127 BABAM1Q9NWV8 329 aa23.52■■□□□ 1.36
MKS1-209ENST00000580127 TSPYL4Q9UJ04 414 aa23.52■■□□□ 1.36
MKS1-209ENST00000580127 ITGBL1O95965 494 aaPredicted RBP23.51■■□□□ 1.35
MKS1-209ENST00000580127 LMOD3Q0VAK6 560 aa23.51■■□□□ 1.35
MKS1-209ENST00000580127 SUSD4Q5VX71 490 aa23.51■■□□□ 1.35
MKS1-209ENST00000580127 CNTROBQ8N137 903 aa23.51■■□□□ 1.35
MKS1-209ENST00000580127 THUMPD2Q9BTF0 503 aaKnown RBP23.51■■□□□ 1.35
MKS1-209ENST00000580127 RIPK4P57078 832 aa23.5■■□□□ 1.35
MKS1-209ENST00000580127 LARGE2Q8N3Y3 721 aa23.5■■□□□ 1.35
MKS1-209ENST00000580127 GJA3Q9Y6H8 435 aa23.5■■□□□ 1.35
MKS1-209ENST00000580127 CNTNAP1P78357 1384 aa23.5■■□□□ 1.35
MKS1-209ENST00000580127 VPS33BQ9H267 617 aa23.49■■□□□ 1.35
MKS1-209ENST00000580127 RNF123Q5XPI4 1314 aa23.49■■□□□ 1.35
MKS1-209ENST00000580127 KDM3BQ7LBC6 1761 aa23.49■■□□□ 1.35
MKS1-209ENST00000580127 PCNTO95613 3336 aa23.49■■□□□ 1.35
MKS1-209ENST00000580127 RIC1Q4ADV7 1423 aa23.49■■□□□ 1.35
MKS1-209ENST00000580127 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
MKS1-209ENST00000580127 RALBP1Q15311 655 aa23.48■■□□□ 1.35
MKS1-209ENST00000580127 UTP14AQ9BVJ6 771 aaKnown RBP23.48■■□□□ 1.35
MKS1-209ENST00000580127 PPEF1O14829 653 aaPredicted RBP23.47■■□□□ 1.35
MKS1-209ENST00000580127 DEFB115Q30KQ5 88 aa23.47■■□□□ 1.35
MKS1-209ENST00000580127 HSP90AB3PQ58FF7 597 aa23.47■■□□□ 1.35
MKS1-209ENST00000580127 NIM1KQ8IY84 436 aa23.47■■□□□ 1.35
MKS1-209ENST00000580127 SUPT20HQ8NEM7 779 aa23.47■■□□□ 1.35
MKS1-209ENST00000580127 ABCC12Q96J65 1359 aa23.47■■□□□ 1.35
MKS1-209ENST00000580127 SLC10A5Q5PT55 438 aa23.46■■□□□ 1.35
MKS1-209ENST00000580127 UBN2Q6ZU65 1347 aa23.45■■□□□ 1.34
MKS1-209ENST00000580127 TCERG1O14776 1098 aaKnown RBP23.45■■□□□ 1.34
MKS1-209ENST00000580127 NTSR2O95665 410 aa23.45■■□□□ 1.34
MKS1-209ENST00000580127 CTCFP49711 727 aaPredicted RBP23.45■■□□□ 1.34
MKS1-209ENST00000580127 VEGFBP49765 207 aa23.45■■□□□ 1.34
MKS1-209ENST00000580127 MAP1SQ66K74 1059 aaPredicted RBP23.45■■□□□ 1.34
MKS1-209ENST00000580127 BBOX1O75936 387 aa23.44■■□□□ 1.34
MKS1-209ENST00000580127 PRDM10Q9NQV6 1147 aa23.44■■□□□ 1.34
MKS1-209ENST00000580127 USP50Q70EL3 339 aaPredicted RBP23.43■■□□□ 1.34
MKS1-209ENST00000580127 ABT1Q9ULW3 272 aaKnown RBP23.43■■□□□ 1.34
MKS1-209ENST00000580127 ATP6V0A2Q9Y487 856 aa23.43■■□□□ 1.34
MKS1-209ENST00000580127 PPIP5K2O43314 1243 aa23.42■■□□□ 1.34
MKS1-209ENST00000580127 MAP2K1Q02750 393 aaPredicted RBP23.41■■□□□ 1.34
MKS1-209ENST00000580127 RASSF10A6NK89 507 aa23.4■■□□□ 1.34
MKS1-209ENST00000580127 FOXN1O15353 648 aa23.4■■□□□ 1.34
MKS1-209ENST00000580127 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
MKS1-209ENST00000580127 PDIA6Q15084 440 aa23.4■■□□□ 1.34
MKS1-209ENST00000580127 DDX46Q7L014 1031 aaKnown RBP23.4■■□□□ 1.34
MKS1-209ENST00000580127 COPS6Q7L5N1 327 aa23.4■■□□□ 1.34
MKS1-209ENST00000580127 AIMP1Q12904 312 aaKnown RBP23.39■■□□□ 1.33
MKS1-209ENST00000580127 DPP8Q6V1X1 898 aaPredicted RBP23.39■■□□□ 1.33
MKS1-209ENST00000580127 SP8Q8IXZ3 490 aa23.39■■□□□ 1.33
MKS1-209ENST00000580127 DDX21Q9NR30 783 aaKnown RBP eCLIP23.39■■□□□ 1.33
MKS1-209ENST00000580127 TRMT112Q9UI30 125 aaKnown RBP23.39■■□□□ 1.33
MKS1-209ENST00000580127 ZNRF3Q9ULT6 936 aa23.39■■□□□ 1.33
MKS1-209ENST00000580127 EPS15P42566 896 aa23.38■■□□□ 1.33
MKS1-209ENST00000580127 ECE1P42892 770 aa23.38■■□□□ 1.33
MKS1-209ENST00000580127 MPNDQ8N594 471 aa23.38■■□□□ 1.33
MKS1-209ENST00000580127 WBP1LQ9NX94 342 aa23.38■■□□□ 1.33
MKS1-209ENST00000580127 SNED1Q8TER0 1413 aa23.38■■□□□ 1.33
MKS1-209ENST00000580127 TCIRG1Q13488 830 aa23.37■■□□□ 1.33
MKS1-209ENST00000580127 TNIP1Q15025 636 aa23.37■■□□□ 1.33
MKS1-209ENST00000580127 TMC4Q7Z404 712 aa23.37■■□□□ 1.33
MKS1-209ENST00000580127 XAGE3Q8WTP9 111 aa23.37■■□□□ 1.33
MKS1-209ENST00000580127 BEGAINQ9BUH8 593 aa23.37■■□□□ 1.33
MKS1-209ENST00000580127 WDR33Q9C0J8 1336 aaKnown RBP23.36■■□□□ 1.33
MKS1-209ENST00000580127 SCNN1DP51172 638 aa23.36■■□□□ 1.33
MKS1-209ENST00000580127 NEUROD2Q15784 382 aa23.36■■□□□ 1.33
MKS1-209ENST00000580127 AOC3Q16853 763 aa23.36■■□□□ 1.33
MKS1-209ENST00000580127 C3orf67Q6ZVT6 689 aa23.36■■□□□ 1.33
MKS1-209ENST00000580127 LRP10Q7Z4F1 713 aa23.36■■□□□ 1.33
MKS1-209ENST00000580127 NLRP10Q86W26 655 aa23.36■■□□□ 1.33
MKS1-209ENST00000580127 NECTIN2Q92692 538 aa23.36■■□□□ 1.33
MKS1-209ENST00000580127 RTFDC1Q9BY42 306 aaPredicted RBP23.36■■□□□ 1.33
MKS1-209ENST00000580127 ADARB2Q9NS39 739 aaKnown RBP23.36■■□□□ 1.33
MKS1-209ENST00000580127 SH3TC1Q8TE82 1336 aa23.35■■□□□ 1.33
MKS1-209ENST00000580127 ADAMTSL1Q8N6G6 1762 aa23.35■■□□□ 1.33
MKS1-209ENST00000580127 WDR43Q15061 677 aaKnown RBP eCLIP23.35■■□□□ 1.33
MKS1-209ENST00000580127 PROSER3Q2NL68 480 aa23.35■■□□□ 1.33
MKS1-209ENST00000580127 LAS1LQ9Y4W2 734 aaKnown RBP23.35■■□□□ 1.33
MKS1-209ENST00000580127 ABCC4O15439 1325 aa23.34■■□□□ 1.33
MKS1-209ENST00000580127 ANXA1P04083 346 aa23.34■■□□□ 1.33
MKS1-209ENST00000580127 PAXIP1Q6ZW49 1069 aaPredicted RBP23.34■■□□□ 1.33
MKS1-209ENST00000580127 GPRC5DQ9NZD1 345 aa23.34■■□□□ 1.33
MKS1-209ENST00000580127 CHL1O00533 1208 aa23.33■■□□□ 1.33
MKS1-209ENST00000580127 HCLS1P14317 486 aaPredicted RBP23.33■■□□□ 1.33
MKS1-209ENST00000580127 CXCL9Q07325 125 aa23.33■■□□□ 1.33
MKS1-209ENST00000580127 BCL2L13Q9BXK5 485 aa23.33■■□□□ 1.33
MKS1-209ENST00000580127 CIAPIN1Q6FI81 312 aa23.32■■□□□ 1.32
MKS1-209ENST00000580127 RUNDC1Q96C34 613 aa23.32■■□□□ 1.32
MKS1-209ENST00000580127 LBX1P52954 281 aa23.31■■□□□ 1.32
MKS1-209ENST00000580127 KIAA2012Q0VF49 1180 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms