RNA–Protein interactions for RNA: ENST00000579205.5

MSI2-207, Transcript of musashi RNA binding protein 2, humanhuman

TSL 4

Gene MSI2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-207ENST00000579205 ZBTB47Q9UFB7 747 aaPredicted RBP18.5■□□□□ 0.55
MSI2-207ENST00000579205 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
MSI2-207ENST00000579205 UTYO14607 1347 aa18.49■□□□□ 0.55
MSI2-207ENST00000579205 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
MSI2-207ENST00000579205 NPHP1O15259 732 aa18.49■□□□□ 0.55
MSI2-207ENST00000579205 NBPF7P0C2Y1 421 aaPredicted RBP18.49■□□□□ 0.55
MSI2-207ENST00000579205 HDAC1Q13547 482 aaPredicted RBP18.49■□□□□ 0.55
MSI2-207ENST00000579205 NLRP10Q86W26 655 aa18.49■□□□□ 0.55
MSI2-207ENST00000579205 ANKRD44Q8N8A2 993 aa18.49■□□□□ 0.55
MSI2-207ENST00000579205 TRMT112Q9UI30 125 aaKnown RBP18.49■□□□□ 0.55
MSI2-207ENST00000579205 ZNF34Q8IZ26 560 aa18.48■□□□□ 0.55
MSI2-207ENST00000579205 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
MSI2-207ENST00000579205 UTP14AQ9BVJ6 771 aaKnown RBP18.48■□□□□ 0.55
MSI2-207ENST00000579205 NYXQ9GZU5 481 aa18.48■□□□□ 0.55
MSI2-207ENST00000579205 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
MSI2-207ENST00000579205 PCCAP05165 728 aaPredicted RBP18.47■□□□□ 0.55
MSI2-207ENST00000579205 GTF2E1P29083 439 aaPredicted RBP18.47■□□□□ 0.55
MSI2-207ENST00000579205 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
MSI2-207ENST00000579205 ZBTB38Q8NAP3 1195 aaPredicted RBP18.47■□□□□ 0.55
MSI2-207ENST00000579205 AKT1S1Q96B36 256 aa18.47■□□□□ 0.55
MSI2-207ENST00000579205 H7C1W4 665 aa18.46■□□□□ 0.55
MSI2-207ENST00000579205 ZNF827Q17R98 1081 aa18.46■□□□□ 0.55
MSI2-207ENST00000579205 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
MSI2-207ENST00000579205 SRP68Q9UHB9 627 aaKnown RBP18.46■□□□□ 0.55
MSI2-207ENST00000579205 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
MSI2-207ENST00000579205 GCC1Q96CN9 775 aa18.45■□□□□ 0.54
MSI2-207ENST00000579205 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
MSI2-207ENST00000579205 CDHR2Q9BYE9 1310 aa18.45■□□□□ 0.54
MSI2-207ENST00000579205 SRGAP3O43295 1099 aa18.44■□□□□ 0.54
MSI2-207ENST00000579205 ATP8B2P98198 1209 aa18.44■□□□□ 0.54
MSI2-207ENST00000579205 SLC15A2Q16348 729 aa18.44■□□□□ 0.54
MSI2-207ENST00000579205 RTL5Q5HYW3 569 aaPredicted RBP18.44■□□□□ 0.54
MSI2-207ENST00000579205 NBPF5PQ86XG9 351 aaPredicted RBP18.44■□□□□ 0.54
MSI2-207ENST00000579205 SUCLG2Q96I99 432 aa18.44■□□□□ 0.54
MSI2-207ENST00000579205 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
MSI2-207ENST00000579205 FAM177BA6PVY3 158 aa18.43■□□□□ 0.54
MSI2-207ENST00000579205 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
MSI2-207ENST00000579205 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
MSI2-207ENST00000579205 UBN2Q6ZU65 1347 aa18.43■□□□□ 0.54
MSI2-207ENST00000579205 CARMIL3Q8ND23 1372 aa18.42■□□□□ 0.54
MSI2-207ENST00000579205 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
MSI2-207ENST00000579205 HSP90AB4PQ58FF6 505 aa18.42■□□□□ 0.54
MSI2-207ENST00000579205 TBC1D9BQ66K14 1250 aa18.42■□□□□ 0.54
MSI2-207ENST00000579205 TPTE2Q6XPS3 522 aa18.42■□□□□ 0.54
MSI2-207ENST00000579205 SMIM5Q71RC9 77 aa18.42■□□□□ 0.54
MSI2-207ENST00000579205 OS9Q13438 667 aaPredicted RBP18.41■□□□□ 0.54
MSI2-207ENST00000579205 MTX1Q13505 466 aa18.41■□□□□ 0.54
MSI2-207ENST00000579205 SUSD4Q5VX71 490 aa18.41■□□□□ 0.54
MSI2-207ENST00000579205 NLGN1Q8N2Q7 840 aa18.41■□□□□ 0.54
MSI2-207ENST00000579205 JARID2Q92833 1246 aaPredicted RBP18.41■□□□□ 0.54
MSI2-207ENST00000579205 KDM2BQ8NHM5 1336 aa18.41■□□□□ 0.54
MSI2-207ENST00000579205 IGHDP01880 384 aa18.4■□□□□ 0.54
MSI2-207ENST00000579205 GYS1P13807 737 aa18.4■□□□□ 0.54
MSI2-207ENST00000579205 AMIGO3Q86WK7 504 aa18.4■□□□□ 0.54
MSI2-207ENST00000579205 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
MSI2-207ENST00000579205 TUBGCP6Q96RT7 1819 aa18.39■□□□□ 0.54
MSI2-207ENST00000579205 PDE8AO60658 829 aa18.39■□□□□ 0.53
MSI2-207ENST00000579205 NTSR2O95665 410 aa18.39■□□□□ 0.53
MSI2-207ENST00000579205 CASP7P55210 303 aa18.39■□□□□ 0.53
MSI2-207ENST00000579205 COL23A1Q86Y22 540 aaPredicted RBP18.39■□□□□ 0.53
MSI2-207ENST00000579205 SSH3Q8TE77 659 aa18.39■□□□□ 0.53
MSI2-207ENST00000579205 PLA2G12BQ9BX93 195 aa18.39■□□□□ 0.53
MSI2-207ENST00000579205 BCL2L12Q9HB09 334 aa18.39■□□□□ 0.53
MSI2-207ENST00000579205 ST5P78524 1137 aa18.38■□□□□ 0.53
MSI2-207ENST00000579205 TAF7LQ5H9L4 462 aa18.38■□□□□ 0.53
MSI2-207ENST00000579205 LMBR1LQ6UX01 489 aa18.38■□□□□ 0.53
MSI2-207ENST00000579205 SIRT2Q8IXJ6 389 aa18.38■□□□□ 0.53
MSI2-207ENST00000579205 CNBD1Q8NA66 436 aa18.38■□□□□ 0.53
MSI2-207ENST00000579205 UPF1Q92900 1129 aaKnown RBP eCLIP18.38■□□□□ 0.53
MSI2-207ENST00000579205 ANO8Q9HCE9 1232 aaPredicted RBP18.38■□□□□ 0.53
MSI2-207ENST00000579205 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
MSI2-207ENST00000579205 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
MSI2-207ENST00000579205 PNMA6EA0A0J9YXQ4 647 aa18.37■□□□□ 0.53
MSI2-207ENST00000579205 CTSWP56202 376 aa18.37■□□□□ 0.53
MSI2-207ENST00000579205 CCDC57Q2TAC2 916 aa18.37■□□□□ 0.53
MSI2-207ENST00000579205 RABL6Q3YEC7 729 aaPredicted RBP18.37■□□□□ 0.53
MSI2-207ENST00000579205 ERC1Q8IUD2 1116 aa18.37■□□□□ 0.53
MSI2-207ENST00000579205 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
MSI2-207ENST00000579205 DCTPP1Q9H773 170 aa18.37■□□□□ 0.53
MSI2-207ENST00000579205 SURF6O75683 361 aaKnown RBP18.36■□□□□ 0.53
MSI2-207ENST00000579205 MYH3P11055 1940 aa18.36■□□□□ 0.53
MSI2-207ENST00000579205 G3BP1Q13283 466 aaKnown RBP eCLIP18.36■□□□□ 0.53
MSI2-207ENST00000579205 POLA2Q14181 598 aa18.36■□□□□ 0.53
MSI2-207ENST00000579205 NFIXQ14938 502 aa18.36■□□□□ 0.53
MSI2-207ENST00000579205 CCDC152Q4G0S7 254 aa18.36■□□□□ 0.53
MSI2-207ENST00000579205 LAMB2P55268 1798 aa18.35■□□□□ 0.53
MSI2-207ENST00000579205 RAB11FIP3O75154 756 aa18.35■□□□□ 0.53
MSI2-207ENST00000579205 IFIT5Q13325 482 aaKnown RBP18.35■□□□□ 0.53
MSI2-207ENST00000579205 ANKRD45Q5TZF3 282 aa18.35■□□□□ 0.53
MSI2-207ENST00000579205 NUTM1Q86Y26 1132 aa18.35■□□□□ 0.53
MSI2-207ENST00000579205 KAZALD1Q96I82 304 aa18.35■□□□□ 0.53
MSI2-207ENST00000579205 PARP3Q9Y6F1 533 aa18.35■□□□□ 0.53
MSI2-207ENST00000579205 HCLS1P14317 486 aaPredicted RBP18.34■□□□□ 0.53
MSI2-207ENST00000579205 FOXO4P98177 505 aa18.34■□□□□ 0.53
MSI2-207ENST00000579205 ERFEQ4G0M1 354 aa18.34■□□□□ 0.53
MSI2-207ENST00000579205 EPHA10Q5JZY3 1008 aa18.34■□□□□ 0.53
MSI2-207ENST00000579205 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
MSI2-207ENST00000579205 ANKRD18BA2A2Z9 1011 aa18.33■□□□□ 0.52
MSI2-207ENST00000579205 APBB1O00213 710 aa18.33■□□□□ 0.52
MSI2-207ENST00000579205 SERPINB2P05120 415 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms