RNA–Protein interactions for RNA: ENST00000578567.1

CCDC58P1-201, Transcript of coiled-coil domain containing 58 pseudogene 1, humanhuman

BASIC

Gene CCDC58P1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P1-201ENST00000578567 SAGE1Q9NXZ1 904 aa10.73□□□□□ -0.69
CCDC58P1-201ENST00000578567 CARMIL3Q8ND23 1372 aa10.73□□□□□ -0.69
CCDC58P1-201ENST00000578567 AMPHP49418 695 aa10.72□□□□□ -0.69
CCDC58P1-201ENST00000578567 NFIXQ14938 502 aa10.72□□□□□ -0.69
CCDC58P1-201ENST00000578567 SERPINB2P05120 415 aa10.71□□□□□ -0.69
CCDC58P1-201ENST00000578567 USPL1Q5W0Q7 1092 aa10.71□□□□□ -0.69
CCDC58P1-201ENST00000578567 ZNF622Q969S3 477 aaKnown RBP eCLIP10.71□□□□□ -0.69
CCDC58P1-201ENST00000578567 CRKLP46109 303 aaKnown RBP10.7□□□□□ -0.7
CCDC58P1-201ENST00000578567 NOGQ13253 232 aa10.7□□□□□ -0.7
CCDC58P1-201ENST00000578567 PKN2Q16513 984 aaKnown RBP10.69□□□□□ -0.7
CCDC58P1-201ENST00000578567 ANKRD31Q8N7Z5 1873 aa10.69□□□□□ -0.7
CCDC58P1-201ENST00000578567 SLX4Q8IY92 1834 aa10.68□□□□□ -0.7
CCDC58P1-201ENST00000578567 CELF2O95319 508 aaKnown RBP10.68□□□□□ -0.7
CCDC58P1-201ENST00000578567 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
CCDC58P1-201ENST00000578567 RNF186Q9NXI6 227 aa10.68□□□□□ -0.7
CCDC58P1-201ENST00000578567 EDC4Q6P2E9 1401 aaKnown RBP10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 SCN11AQ9UI33 1791 aa10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 COL11A2P13942 1736 aaPredicted RBP10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 RTL1A6NKG5 1358 aa10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 MKI67P46013 3256 aaKnown RBP10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 C2orf72A6NCS6 295 aa10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 FZD9O00144 591 aa10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 TRPA1O75762 1119 aa10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 VARS2Q5ST30 1063 aaKnown RBP10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 BICDL1Q6ZP65 573 aa10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 GPC2Q8N158 579 aa10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 COL6A3P12111 3177 aa10.67□□□□□ -0.7
CCDC58P1-201ENST00000578567 CACNA1SQ13698 1873 aa10.66□□□□□ -0.7
CCDC58P1-201ENST00000578567 FAM155AB1AL88 458 aaPredicted RBP10.66□□□□□ -0.7
CCDC58P1-201ENST00000578567 ZPR1O75312 459 aa10.66□□□□□ -0.7
CCDC58P1-201ENST00000578567 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
CCDC58P1-201ENST00000578567 INTS5Q6P9B9 1019 aaKnown RBP10.66□□□□□ -0.7
CCDC58P1-201ENST00000578567 BCL2L12Q9HB09 334 aa10.66□□□□□ -0.7
CCDC58P1-201ENST00000578567 PDZRN3Q9UPQ7 1066 aa10.66□□□□□ -0.7
CCDC58P1-201ENST00000578567 EPS15P42566 896 aa10.65□□□□□ -0.7
CCDC58P1-201ENST00000578567 SOGA3Q5TF21 947 aa10.65□□□□□ -0.7
CCDC58P1-201ENST00000578567 HS6ST3Q8IZP7 471 aa10.65□□□□□ -0.7
CCDC58P1-201ENST00000578567 ZNF687Q8N1G0 1237 aa10.65□□□□□ -0.7
CCDC58P1-201ENST00000578567 C7orf43Q8WVR3 580 aa10.65□□□□□ -0.7
CCDC58P1-201ENST00000578567 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
CCDC58P1-201ENST00000578567 PHKG2P15735 406 aa10.64□□□□□ -0.71
CCDC58P1-201ENST00000578567 PDE6BP35913 854 aa10.64□□□□□ -0.71
CCDC58P1-201ENST00000578567 PRPF40BQ6NWY9 871 aaKnown RBP10.64□□□□□ -0.71
CCDC58P1-201ENST00000578567 USP50Q70EL3 339 aaPredicted RBP10.64□□□□□ -0.71
CCDC58P1-201ENST00000578567 SYNE4Q8N205 404 aa10.64□□□□□ -0.71
CCDC58P1-201ENST00000578567 BRIP1Q9BX63 1249 aa10.64□□□□□ -0.71
CCDC58P1-201ENST00000578567 COL25A1Q9BXS0 654 aaPredicted RBP10.64□□□□□ -0.71
CCDC58P1-201ENST00000578567 ZNF277Q9NRM2 450 aaPredicted RBP10.64□□□□□ -0.71
CCDC58P1-201ENST00000578567 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 ARFGEF2Q9Y6D5 1785 aa10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 AKAP11Q9UKA4 1901 aa10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 PPP1R37O75864 691 aa10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 SCNN1DP51172 638 aa10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 KIF23Q02241 960 aaPredicted RBP10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 FKBP4Q02790 459 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 RRS1Q15050 365 aaKnown RBP10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 CNKSR1Q969H4 720 aa10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 NARFQ9UHQ1 456 aa10.63□□□□□ -0.71
CCDC58P1-201ENST00000578567 TJP1Q07157 1748 aa10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 NCAPD2Q15021 1401 aa10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 HSP90AB2PQ58FF8 381 aa10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 FBXO46Q6PJ61 603 aaPredicted RBP10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 HDGFL2Q7Z4V5 671 aaPredicted RBP10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 IFNL2Q8IZJ0 200 aa10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 COG3Q96JB2 828 aa10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 SLC12A5Q9H2X9 1139 aa10.62□□□□□ -0.71
CCDC58P1-201ENST00000578567 SOS1Q07889 1333 aaPredicted RBP10.61□□□□□ -0.71
CCDC58P1-201ENST00000578567 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
CCDC58P1-201ENST00000578567 LMOD1P29536 600 aaPredicted RBP10.61□□□□□ -0.71
CCDC58P1-201ENST00000578567 CCDC93Q567U6 631 aa10.61□□□□□ -0.71
CCDC58P1-201ENST00000578567 STYK1Q6J9G0 422 aa10.61□□□□□ -0.71
CCDC58P1-201ENST00000578567 GLIS2Q9BZE0 524 aaPredicted RBP10.61□□□□□ -0.71
CCDC58P1-201ENST00000578567 BCORQ6W2J9 1755 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 ZNF316A6NFI3 1004 aaPredicted RBP10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 ERVV-2B6SEH9 535 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 PTCD1O75127 700 aaKnown RBP10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 SRGNP10124 158 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 HUNKP57058 714 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 CCDC24Q8N4L8 307 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 MPNDQ8N594 471 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 CSRNP1Q96S65 589 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 ZNF408Q9H9D4 720 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 GJA3Q9Y6H8 435 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 A0A1W2PP64 1363 aa10.6□□□□□ -0.71
CCDC58P1-201ENST00000578567 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
CCDC58P1-201ENST00000578567 PRR5LQ6MZQ0 368 aa10.59□□□□□ -0.71
CCDC58P1-201ENST00000578567 RGMBQ6NW40 437 aa10.59□□□□□ -0.71
CCDC58P1-201ENST00000578567 ZNF296Q8WUU4 475 aaPredicted RBP10.59□□□□□ -0.71
CCDC58P1-201ENST00000578567 KHSRPQ92945 711 aaKnown RBP eCLIP10.59□□□□□ -0.71
CCDC58P1-201ENST00000578567 PGAP2Q9UHJ9 254 aa10.59□□□□□ -0.71
CCDC58P1-201ENST00000578567 HDAC9Q9UKV0 1011 aa10.59□□□□□ -0.71
CCDC58P1-201ENST00000578567 PAPPA2Q9BXP8 1791 aa10.59□□□□□ -0.71
CCDC58P1-201ENST00000578567 RBBP6Q7Z6E9 1792 aaKnown RBP10.58□□□□□ -0.72
CCDC58P1-201ENST00000578567 COL4A5P29400 1685 aa10.58□□□□□ -0.72
CCDC58P1-201ENST00000578567 TONSLQ96HA7 1378 aa10.58□□□□□ -0.72
CCDC58P1-201ENST00000578567 TMC1Q8TDI8 760 aa10.58□□□□□ -0.72
CCDC58P1-201ENST00000578567 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
CCDC58P1-201ENST00000578567 H0YGN5 161 aa10.57□□□□□ -0.72
CCDC58P1-201ENST00000578567 OLFM4Q6UX06 510 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms