RNA–Protein interactions for RNA: ENST00000578561.1

ERVFRD-3-201, Transcript of endogenous retrovirus group FRD member 3, humanhuman

BASIC

Gene ERVFRD-3, Length 1,617 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-3-201ENST00000578561 ARHGEF25Q86VW2 580 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 GCC1Q96CN9 775 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 TBC1D32Q96NH3 1257 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 CHMP4BQ9H444 224 aaKnown RBP6.65□□□□□ -1.35
ERVFRD-3-201ENST00000578561 PTPRCP08575 1304 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 CEMIPQ8WUJ3 1361 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 MST1RQ04912 1400 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 C1orf167Q5SNV9 1468 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ST8SIA5O15466 376 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 GCP02774 474 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 XPCQ01831 940 aaPredicted RBP6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 SWT1Q5T5J6 900 aaKnown RBP6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 PROSER2Q86WR7 435 aaPredicted RBP6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 CRIPAKQ8N1N5 446 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 KCNH5Q8NCM2 988 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 LNPKQ9C0E8 428 aa6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 PHRF1Q9P1Y6 1649 aaKnown RBP6.64□□□□□ -1.35
ERVFRD-3-201ENST00000578561 MED1Q15648 1581 aaPredicted RBP6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 TNFRSF10AO00220 468 aa6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 TAF7Q15545 349 aaPredicted RBP6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 CEP85Q6P2H3 762 aa6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ANKRD44Q8N8A2 993 aa6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 LRRC59Q96AG4 307 aaKnown RBP6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 MEIS3Q99687 375 aa6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 C19orf44Q9H6X5 657 aa6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 DCTPP1Q9H773 170 aa6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 BABAM1Q9NWV8 329 aa6.63□□□□□ -1.35
ERVFRD-3-201ENST00000578561 TRPM3Q9HCF6 1732 aaPredicted RBP6.62□□□□□ -1.35
ERVFRD-3-201ENST00000578561 PTGDRQ13258 359 aa6.62□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ANKRD45Q5TZF3 282 aa6.62□□□□□ -1.35
ERVFRD-3-201ENST00000578561 LIAT1Q6ZQX7 453 aa6.62□□□□□ -1.35
ERVFRD-3-201ENST00000578561 KRT28Q7Z3Y7 464 aa6.62□□□□□ -1.35
ERVFRD-3-201ENST00000578561 LGR6Q9HBX8 967 aa6.62□□□□□ -1.35
ERVFRD-3-201ENST00000578561 LTN1O94822 1766 aa6.62□□□□□ -1.35
ERVFRD-3-201ENST00000578561 F6X3S4 739 aa6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 TULP1O00294 542 aaPredicted RBP6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 BMP2KLQ5H9B9 411 aa6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 RPAP2Q8IXW5 612 aaPredicted RBP6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 SOS1Q07889 1333 aaPredicted RBP6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 EIF4A1P60842 406 aaKnown RBP6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 FLIIQ13045 1269 aa6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 PADI6Q6TGC4 694 aa6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 PLEKHM2Q8IWE5 1019 aa6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 TMEM94Q12767 1356 aa6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 PXDNQ92626 1479 aa6.61□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ZBTB7CA1YPR0 619 aa6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 KCNQ3O43525 872 aa6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 GSPT1P15170 499 aaKnown RBP6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 CCT4P50991 539 aaKnown RBP6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 NFX1Q12986 1120 aaKnown RBP6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 AKAP4Q5JQC9 854 aa6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 CCDC30Q5VVM6 783 aa6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 BLOC1S3Q6QNY0 202 aa6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 C16orf71Q8IYS4 520 aaPredicted RBP6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 TBC1D2Q9BYX2 928 aa6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
ERVFRD-3-201ENST00000578561 STRCP1A6NGW2 1772 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 CAMTA1Q9Y6Y1 1673 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 DCCP43146 1447 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 NCOA3Q9Y6Q9 1424 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 MFAP1P55081 439 aaKnown RBP6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 CTC1Q2NKJ3 1217 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 PLEKHO1Q53GL0 409 aaPredicted RBP6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ZNF530Q6P9A1 599 aaPredicted RBP6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 TTC13Q8NBP0 860 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 OTUD7AQ8TE49 926 aaPredicted RBP6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 DDX17Q92841 729 aaKnown RBP6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ANTXR1Q9H6X2 564 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 KIF1AQ12756 1690 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 LMO7Q8WWI1 1683 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 ALS2Q96Q42 1657 aa6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 FAM208AQ9UK61 1670 aaKnown RBP6.59□□□□□ -1.35
ERVFRD-3-201ENST00000578561 HEG1Q9ULI3 1381 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 FAM181BA6NEQ2 426 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 RNMTO43148 476 aaKnown RBP6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 S1PR4O95977 384 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 RBM25P49756 843 aaKnown RBP6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 NFKBIBQ15653 356 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 SLC4A10Q6U841 1118 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 MPRIPQ6WCQ1 1025 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 TBC1D9Q6ZT07 1266 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 GPIHBP1Q8IV16 184 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 STK31Q9BXU1 1019 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 PHAXQ9H814 394 aaKnown RBP6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 UPF2Q9HAU5 1272 aaKnown RBP6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 USP35Q9P2H5 1018 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 RGPD2P0DJD1 1756 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 LMTK3Q96Q04 1460 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 OVOS2A0A0G2JMS6 1433 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 PPEF1O14829 653 aaPredicted RBP6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 AXIN1O15169 862 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 TLL1O43897 1013 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 SMARCA5O60264 1052 aaPredicted RBP6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 AVPP01185 164 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 HOXB7P09629 217 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 HSPA2P54652 639 aa6.58□□□□□ -1.36
ERVFRD-3-201ENST00000578561 ZC3H6P61129 1189 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms