RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 PROM2Q8N271 834 aa16.59■□□□□ 0.25
CDK5RAP3-205ENST00000577802 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 EN1Q05925 392 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 HLFQ16534 295 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 CEP85Q6P2H3 762 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 UBE3BQ7Z3V4 1068 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 NLRP10Q86W26 655 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 ZNF34Q8IZ26 560 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 ARHGEF1Q92888 912 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 NYXQ9GZU5 481 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 C1orf115Q9H7X2 142 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 CDHR2Q9BYE9 1310 aa16.58■□□□□ 0.24
CDK5RAP3-205ENST00000577802 CARMIL3Q8ND23 1372 aa16.57■□□□□ 0.24
CDK5RAP3-205ENST00000577802 NBPF7P0C2Y1 421 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-205ENST00000577802 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-205ENST00000577802 USPL1Q5W0Q7 1092 aa16.57■□□□□ 0.24
CDK5RAP3-205ENST00000577802 NIP7Q9Y221 180 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDK5RAP3-205ENST00000577802 PCDHB15Q9Y5E8 787 aa16.57■□□□□ 0.24
CDK5RAP3-205ENST00000577802 H7C1W4 665 aa16.56■□□□□ 0.24
CDK5RAP3-205ENST00000577802 GPTP24298 496 aa16.56■□□□□ 0.24
CDK5RAP3-205ENST00000577802 PELP1Q8IZL8 1130 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-205ENST00000577802 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
CDK5RAP3-205ENST00000577802 GCC1Q96CN9 775 aa16.56■□□□□ 0.24
CDK5RAP3-205ENST00000577802 MYH3P11055 1940 aa16.56■□□□□ 0.24
CDK5RAP3-205ENST00000577802 KDM2BQ8NHM5 1336 aa16.55■□□□□ 0.24
CDK5RAP3-205ENST00000577802 SH3TC1Q8TE82 1336 aa16.55■□□□□ 0.24
CDK5RAP3-205ENST00000577802 MTX1Q13505 466 aa16.55■□□□□ 0.24
CDK5RAP3-205ENST00000577802 ZNF827Q17R98 1081 aa16.55■□□□□ 0.24
CDK5RAP3-205ENST00000577802 SETDB2Q96T68 719 aa16.55■□□□□ 0.24
CDK5RAP3-205ENST00000577802 UTP14AQ9BVJ6 771 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-205ENST00000577802 TRMT112Q9UI30 125 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-205ENST00000577802 UBN2Q6ZU65 1347 aa16.54■□□□□ 0.24
CDK5RAP3-205ENST00000577802 ZBTB47Q9UFB7 747 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-205ENST00000577802 CASP7P55210 303 aa16.53■□□□□ 0.24
CDK5RAP3-205ENST00000577802 ATP8B2P98198 1209 aa16.53■□□□□ 0.24
CDK5RAP3-205ENST00000577802 SLC15A2Q16348 729 aa16.53■□□□□ 0.24
CDK5RAP3-205ENST00000577802 HSP90AB4PQ58FF6 505 aa16.53■□□□□ 0.24
CDK5RAP3-205ENST00000577802 SUCLG2Q96I99 432 aa16.53■□□□□ 0.24
CDK5RAP3-205ENST00000577802 PLA2G12BQ9BX93 195 aa16.53■□□□□ 0.24
CDK5RAP3-205ENST00000577802 NPHP1O15259 732 aa16.52■□□□□ 0.24
CDK5RAP3-205ENST00000577802 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
CDK5RAP3-205ENST00000577802 BICC1Q9H694 974 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-205ENST00000577802 SRP68Q9UHB9 627 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-205ENST00000577802 RIC1Q4ADV7 1423 aa16.52■□□□□ 0.23
CDK5RAP3-205ENST00000577802 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-205ENST00000577802 NTSR2O95665 410 aa16.51■□□□□ 0.23
CDK5RAP3-205ENST00000577802 RABL6Q3YEC7 729 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-205ENST00000577802 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
CDK5RAP3-205ENST00000577802 NBPF5PQ86XG9 351 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-205ENST00000577802 NLGN1Q8N2Q7 840 aa16.51■□□□□ 0.23
CDK5RAP3-205ENST00000577802 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 IRS4O14654 1257 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 PDE8AO60658 829 aa16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 GYS1P13807 737 aa16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 TBC1D9BQ66K14 1250 aa16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 TPTE2Q6XPS3 522 aa16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 AMIGO3Q86WK7 504 aa16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 BCL2L12Q9HB09 334 aa16.5■□□□□ 0.23
CDK5RAP3-205ENST00000577802 POLA2Q14181 598 aa16.49■□□□□ 0.23
CDK5RAP3-205ENST00000577802 SUSD4Q5VX71 490 aa16.49■□□□□ 0.23
CDK5RAP3-205ENST00000577802 SMC5Q8IY18 1101 aa16.49■□□□□ 0.23
CDK5RAP3-205ENST00000577802 FAM89AQ96GI7 184 aa16.49■□□□□ 0.23
CDK5RAP3-205ENST00000577802 IGHDP01880 384 aa16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 CTSWP56202 376 aa16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 ST5P78524 1137 aa16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 SIRT2Q8IXJ6 389 aa16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 DCTPP1Q9H773 170 aa16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-205ENST00000577802 RAB11FIP3O75154 756 aa16.47■□□□□ 0.23
CDK5RAP3-205ENST00000577802 RTL5Q5HYW3 569 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-205ENST00000577802 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-205ENST00000577802 UPF1Q92900 1129 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDK5RAP3-205ENST00000577802 CHMP3Q9Y3E7 222 aa16.47■□□□□ 0.23
CDK5RAP3-205ENST00000577802 RTL9Q8NET4 1388 aa16.47■□□□□ 0.23
CDK5RAP3-205ENST00000577802 NRXN2Q9P2S2 1712 aa16.47■□□□□ 0.23
CDK5RAP3-205ENST00000577802 LRP5O75197 1615 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 FOXO4P98177 505 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 NFIXQ14938 502 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 CCDC57Q2TAC2 916 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 CCDC152Q4G0S7 254 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 SLC16A10Q8TF71 515 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
CDK5RAP3-205ENST00000577802 CASZ1Q86V15 1759 aa16.46■□□□□ 0.22
CDK5RAP3-205ENST00000577802 FAM177BA6PVY3 158 aa16.45■□□□□ 0.22
CDK5RAP3-205ENST00000577802 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-205ENST00000577802 SMIM5Q71RC9 77 aa16.45■□□□□ 0.22
CDK5RAP3-205ENST00000577802 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
CDK5RAP3-205ENST00000577802 SURF6O75683 361 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-205ENST00000577802 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 277.6 ms