RNA–Protein interactions for RNA: ENST00000576964.5

ABR-235, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-235ENST00000576964 ISCA1Q9BUE6 129 aa13.69□□□□□ -0.22
ABR-235ENST00000576964 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
ABR-235ENST00000576964 PIM2Q9P1W9 311 aa13.69□□□□□ -0.22
ABR-235ENST00000576964 PXDNLA1KZ92 1463 aa13.68□□□□□ -0.22
ABR-235ENST00000576964 KIF16BQ96L93 1317 aa13.68□□□□□ -0.22
ABR-235ENST00000576964 NTSR2O95665 410 aa13.68□□□□□ -0.22
ABR-235ENST00000576964 ERFEQ4G0M1 354 aa13.68□□□□□ -0.22
ABR-235ENST00000576964 SLC4A10Q6U841 1118 aa13.68□□□□□ -0.22
ABR-235ENST00000576964 ADCY9O60503 1353 aa13.68□□□□□ -0.22
ABR-235ENST00000576964 NRXN2Q9P2S2 1712 aa13.67□□□□□ -0.22
ABR-235ENST00000576964 CACNA1FO60840 1977 aa13.67□□□□□ -0.22
ABR-235ENST00000576964 AFDNP55196 1824 aaKnown RBP13.67□□□□□ -0.22
ABR-235ENST00000576964 CHRNA5P30532 468 aa13.67□□□□□ -0.22
ABR-235ENST00000576964 LINS1Q8NG48 757 aa13.67□□□□□ -0.22
ABR-235ENST00000576964 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
ABR-235ENST00000576964 ZNF622Q969S3 477 aaKnown RBP eCLIP13.67□□□□□ -0.22
ABR-235ENST00000576964 NLRP3Q96P20 1036 aa13.67□□□□□ -0.22
ABR-235ENST00000576964 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
ABR-235ENST00000576964 ARFGEF2Q9Y6D5 1785 aa13.67□□□□□ -0.22
ABR-235ENST00000576964 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
ABR-235ENST00000576964 IPO8O15397 1037 aaKnown RBP13.66□□□□□ -0.22
ABR-235ENST00000576964 GRIN3BO60391 1043 aa13.66□□□□□ -0.22
ABR-235ENST00000576964 NPR1P16066 1061 aa13.66□□□□□ -0.22
ABR-235ENST00000576964 RARSP54136 660 aaKnown RBP13.66□□□□□ -0.22
ABR-235ENST00000576964 DALRD3Q5D0E6 543 aaKnown RBP13.66□□□□□ -0.22
ABR-235ENST00000576964 ZBTB38Q8NAP3 1195 aaPredicted RBP13.66□□□□□ -0.22
ABR-235ENST00000576964 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
ABR-235ENST00000576964 KIF13BQ9NQT8 1826 aa13.65□□□□□ -0.22
ABR-235ENST00000576964 F6X3S4 739 aa13.65□□□□□ -0.22
ABR-235ENST00000576964 RTL5Q5HYW3 569 aaPredicted RBP13.65□□□□□ -0.22
ABR-235ENST00000576964 TTLL6Q8N841 843 aa13.65□□□□□ -0.22
ABR-235ENST00000576964 CNKSR1Q969H4 720 aa13.65□□□□□ -0.22
ABR-235ENST00000576964 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
ABR-235ENST00000576964 MASTLQ96GX5 879 aa13.65□□□□□ -0.22
ABR-235ENST00000576964 API5Q9BZZ5 524 aaKnown RBP13.65□□□□□ -0.22
ABR-235ENST00000576964 ABCC12Q96J65 1359 aa13.65□□□□□ -0.22
ABR-235ENST00000576964 GOLGB1Q14789 3259 aaKnown RBP13.65□□□□□ -0.23
ABR-235ENST00000576964 RIC1Q4ADV7 1423 aa13.64□□□□□ -0.23
ABR-235ENST00000576964 NEURL1BA8MQ27 555 aa13.64□□□□□ -0.23
ABR-235ENST00000576964 PCCAP05165 728 aaPredicted RBP13.64□□□□□ -0.23
ABR-235ENST00000576964 HCLS1P14317 486 aaPredicted RBP13.64□□□□□ -0.23
ABR-235ENST00000576964 CWF19L2Q2TBE0 894 aaKnown RBP13.64□□□□□ -0.23
ABR-235ENST00000576964 STYK1Q6J9G0 422 aa13.64□□□□□ -0.23
ABR-235ENST00000576964 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
ABR-235ENST00000576964 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
ABR-235ENST00000576964 TMX4Q9H1E5 349 aaPredicted RBP13.64□□□□□ -0.23
ABR-235ENST00000576964 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
ABR-235ENST00000576964 IRS4O14654 1257 aaPredicted RBP13.63□□□□□ -0.23
ABR-235ENST00000576964 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
ABR-235ENST00000576964 SRGNP10124 158 aa13.63□□□□□ -0.23
ABR-235ENST00000576964 ALDH1B1P30837 517 aa13.63□□□□□ -0.23
ABR-235ENST00000576964 SLC10A5Q5PT55 438 aa13.63□□□□□ -0.23
ABR-235ENST00000576964 RBM17Q96I25 401 aaKnown RBP13.63□□□□□ -0.23
ABR-235ENST00000576964 KLRG2A4D1S0 409 aaPredicted RBP13.62□□□□□ -0.23
ABR-235ENST00000576964 ALDH1L1O75891 902 aa13.62□□□□□ -0.23
ABR-235ENST00000576964 KCNA3P22001 575 aa13.62□□□□□ -0.23
ABR-235ENST00000576964 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
ABR-235ENST00000576964 GCKRQ14397 625 aa13.62□□□□□ -0.23
ABR-235ENST00000576964 BEND3Q5T5X7 828 aa13.62□□□□□ -0.23
ABR-235ENST00000576964 C9orf78Q9NZ63 289 aaPredicted RBP13.62□□□□□ -0.23
ABR-235ENST00000576964 N4BP2Q86UW6 1770 aaPredicted RBP13.62□□□□□ -0.23
ABR-235ENST00000576964 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
ABR-235ENST00000576964 DDX46Q7L014 1031 aaKnown RBP13.61□□□□□ -0.23
ABR-235ENST00000576964 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
ABR-235ENST00000576964 ARHGAP45Q92619 1136 aa13.61□□□□□ -0.23
ABR-235ENST00000576964 PDE8AO60658 829 aa13.6□□□□□ -0.23
ABR-235ENST00000576964 BCAR3O75815 825 aa13.6□□□□□ -0.23
ABR-235ENST00000576964 YBX3P16989 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
ABR-235ENST00000576964 CCT4P50991 539 aaKnown RBP13.6□□□□□ -0.23
ABR-235ENST00000576964 CCDC152Q4G0S7 254 aa13.6□□□□□ -0.23
ABR-235ENST00000576964 SOGA3Q5TF21 947 aa13.6□□□□□ -0.23
ABR-235ENST00000576964 ZKSCAN2Q63HK3 967 aa13.6□□□□□ -0.23
ABR-235ENST00000576964 PRPF40BQ6NWY9 871 aaKnown RBP13.6□□□□□ -0.23
ABR-235ENST00000576964 SYNE4Q8N205 404 aa13.6□□□□□ -0.23
ABR-235ENST00000576964 CDHR2Q9BYE9 1310 aa13.6□□□□□ -0.23
ABR-235ENST00000576964 GRM8O00222 908 aa13.59□□□□□ -0.23
ABR-235ENST00000576964 ARHGAP27Q6ZUM4 889 aa13.59□□□□□ -0.23
ABR-235ENST00000576964 FTSJ3Q8IY81 847 aaKnown RBP13.59□□□□□ -0.23
ABR-235ENST00000576964 JARID2Q92833 1246 aaPredicted RBP13.59□□□□□ -0.23
ABR-235ENST00000576964 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
ABR-235ENST00000576964 ANKRD31Q8N7Z5 1873 aa13.59□□□□□ -0.23
ABR-235ENST00000576964 UTRNP46939 3433 aa13.58□□□□□ -0.23
ABR-235ENST00000576964 H7C1W4 665 aa13.58□□□□□ -0.24
ABR-235ENST00000576964 HOXA10P31260 410 aaPredicted RBP13.58□□□□□ -0.24
ABR-235ENST00000576964 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
ABR-235ENST00000576964 CRAMP1Q96RY5 1269 aa13.58□□□□□ -0.24
ABR-235ENST00000576964 RCAN3Q9UKA8 241 aa13.58□□□□□ -0.24
ABR-235ENST00000576964 KIAA1551Q9HCM1 1747 aa13.58□□□□□ -0.24
ABR-235ENST00000576964 TNRC6CQ9HCJ0 1690 aaKnown RBP13.57□□□□□ -0.24
ABR-235ENST00000576964 PPEF1O14829 653 aaPredicted RBP13.57□□□□□ -0.24
ABR-235ENST00000576964 C21orf2O43822 256 aa13.57□□□□□ -0.24
ABR-235ENST00000576964 MS4A1P11836 297 aa13.57□□□□□ -0.24
ABR-235ENST00000576964 CTSWP56202 376 aa13.57□□□□□ -0.24
ABR-235ENST00000576964 SF3B3Q15393 1217 aaKnown RBP13.57□□□□□ -0.24
ABR-235ENST00000576964 C3orf67Q6ZVT6 689 aa13.57□□□□□ -0.24
ABR-235ENST00000576964 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.57□□□□□ -0.24
ABR-235ENST00000576964 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
ABR-235ENST00000576964 COL11A2P13942 1736 aaPredicted RBP13.56□□□□□ -0.24
ABR-235ENST00000576964 DLEC1Q9Y238 1755 aa13.56□□□□□ -0.24
ABR-235ENST00000576964 BBOX1O75936 387 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 232.4 ms