RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 KIF6Q6ZMV9 814 aa15.46■□□□□ 0.07
CTDNEP1-212ENST00000576613 PNISRQ8TF01 805 aaKnown RBP15.46■□□□□ 0.07
CTDNEP1-212ENST00000576613 WBP1LQ9NX94 342 aa15.46■□□□□ 0.07
CTDNEP1-212ENST00000576613 ABCC12Q96J65 1359 aa15.46■□□□□ 0.07
CTDNEP1-212ENST00000576613 IBTKQ9P2D0 1353 aaPredicted RBP15.46■□□□□ 0.07
CTDNEP1-212ENST00000576613 NUTM1Q86Y26 1132 aa15.45■□□□□ 0.06
CTDNEP1-212ENST00000576613 ABT1Q9ULW3 272 aaKnown RBP15.45■□□□□ 0.06
CTDNEP1-212ENST00000576613 GJA3Q9Y6H8 435 aa15.45■□□□□ 0.06
CTDNEP1-212ENST00000576613 DLG5Q8TDM6 1919 aa15.45■□□□□ 0.06
CTDNEP1-212ENST00000576613 MAP3K15Q6ZN16 1313 aa15.44■□□□□ 0.06
CTDNEP1-212ENST00000576613 MAP2K1Q02750 393 aaPredicted RBP15.44■□□□□ 0.06
CTDNEP1-212ENST00000576613 NGEFQ8N5V2 710 aa15.44■□□□□ 0.06
CTDNEP1-212ENST00000576613 MIS18AQ9NYP9 233 aa15.44■□□□□ 0.06
CTDNEP1-212ENST00000576613 HOXA10P31260 410 aaPredicted RBP15.43■□□□□ 0.06
CTDNEP1-212ENST00000576613 LBX1P52954 281 aa15.43■□□□□ 0.06
CTDNEP1-212ENST00000576613 RRP7AQ9Y3A4 280 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-212ENST00000576613 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
CTDNEP1-212ENST00000576613 LARGE2Q8N3Y3 721 aa15.42■□□□□ 0.06
CTDNEP1-212ENST00000576613 RBM17Q96I25 401 aaKnown RBP15.42■□□□□ 0.06
CTDNEP1-212ENST00000576613 TMX4Q9H1E5 349 aaPredicted RBP15.42■□□□□ 0.06
CTDNEP1-212ENST00000576613 DDX21Q9NR30 783 aaKnown RBP eCLIP15.42■□□□□ 0.06
CTDNEP1-212ENST00000576613 LTBP1Q14766 1721 aa15.42■□□□□ 0.06
CTDNEP1-212ENST00000576613 COL4A5P29400 1685 aa15.41■□□□□ 0.06
CTDNEP1-212ENST00000576613 PPEF1O14829 653 aaPredicted RBP15.41■□□□□ 0.06
CTDNEP1-212ENST00000576613 MYL6BP14649 208 aa15.41■□□□□ 0.06
CTDNEP1-212ENST00000576613 GPTP24298 496 aa15.41■□□□□ 0.06
CTDNEP1-212ENST00000576613 CRAMP1Q96RY5 1269 aa15.41■□□□□ 0.06
CTDNEP1-212ENST00000576613 ZBTB3Q9H5J0 574 aa15.41■□□□□ 0.06
CTDNEP1-212ENST00000576613 THSD7BQ9C0I4 1608 aa15.41■□□□□ 0.06
CTDNEP1-212ENST00000576613 UBN2Q6ZU65 1347 aa15.41■□□□□ 0.06
CTDNEP1-212ENST00000576613 HSPA8P11142 646 aaKnown RBP15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 ECE1P42892 770 aa15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 SCNN1DP51172 638 aa15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 EIF4A1P60842 406 aaKnown RBP15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 TTLL7Q6ZT98 887 aa15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 USP50Q70EL3 339 aaPredicted RBP15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 NIM1KQ8IY84 436 aa15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 ERBB4Q15303 1308 aa15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 TRPM7Q96QT4 1865 aa15.4■□□□□ 0.06
CTDNEP1-212ENST00000576613 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.05
CTDNEP1-212ENST00000576613 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
CTDNEP1-212ENST00000576613 BEGAINQ9BUH8 593 aa15.39■□□□□ 0.05
CTDNEP1-212ENST00000576613 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-212ENST00000576613 PPIP5K2O43314 1243 aa15.38■□□□□ 0.05
CTDNEP1-212ENST00000576613 NTSR2O95665 410 aa15.38■□□□□ 0.05
CTDNEP1-212ENST00000576613 EPS15P42566 896 aa15.38■□□□□ 0.05
CTDNEP1-212ENST00000576613 PARP10Q53GL7 1025 aa15.38■□□□□ 0.05
CTDNEP1-212ENST00000576613 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
CTDNEP1-212ENST00000576613 GIGYF2Q6Y7W6 1299 aaKnown RBP15.38■□□□□ 0.05
CTDNEP1-212ENST00000576613 ZNF34Q8IZ26 560 aa15.38■□□□□ 0.05
CTDNEP1-212ENST00000576613 NFE2L2Q16236 605 aa15.37■□□□□ 0.05
CTDNEP1-212ENST00000576613 ABHD8Q96I13 439 aa15.37■□□□□ 0.05
CTDNEP1-212ENST00000576613 CAPNS2Q96L46 248 aa15.37■□□□□ 0.05
CTDNEP1-212ENST00000576613 NLRP3Q96P20 1036 aa15.37■□□□□ 0.05
CTDNEP1-212ENST00000576613 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
CTDNEP1-212ENST00000576613 PNNQ9H307 717 aaKnown RBP15.37■□□□□ 0.05
CTDNEP1-212ENST00000576613 GRM1Q13255 1194 aa15.36■□□□□ 0.05
CTDNEP1-212ENST00000576613 SUPT20HQ8NEM7 779 aa15.36■□□□□ 0.05
CTDNEP1-212ENST00000576613 ADARB2Q9NS39 739 aaKnown RBP15.36■□□□□ 0.05
CTDNEP1-212ENST00000576613 ATP6V0A2Q9Y487 856 aa15.36■□□□□ 0.05
CTDNEP1-212ENST00000576613 MAPK8IP3Q9UPT6 1336 aa15.36■□□□□ 0.05
CTDNEP1-212ENST00000576613 AOC3Q16853 763 aa15.35■□□□□ 0.05
CTDNEP1-212ENST00000576613 GPR101Q96P66 508 aaPredicted RBP15.35■□□□□ 0.05
CTDNEP1-212ENST00000576613 THUMPD2Q9BTF0 503 aaKnown RBP15.35■□□□□ 0.05
CTDNEP1-212ENST00000576613 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
CTDNEP1-212ENST00000576613 TLL2Q9Y6L7 1015 aa15.35■□□□□ 0.05
CTDNEP1-212ENST00000576613 ANKRD36CQ5JPF3 1778 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 TRAF5O00463 557 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 CST9Q5W186 159 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 CYP4F22Q6NT55 531 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 C3orf67Q6ZVT6 689 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 PLEKHF1Q96S99 279 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 ZNRF3Q9ULT6 936 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 CDHR2Q9BYE9 1310 aa15.34■□□□□ 0.05
CTDNEP1-212ENST00000576613 MAP2K2P36507 400 aa15.33■□□□□ 0.04
CTDNEP1-212ENST00000576613 FMR1Q06787 632 aaKnown RBP eCLIP15.33■□□□□ 0.04
CTDNEP1-212ENST00000576613 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.04
CTDNEP1-212ENST00000576613 ABCC4O15439 1325 aa15.33■□□□□ 0.04
CTDNEP1-212ENST00000576613 LAMB2P55268 1798 aa15.33■□□□□ 0.04
CTDNEP1-212ENST00000576613 BBOX1O75936 387 aa15.32■□□□□ 0.04
CTDNEP1-212ENST00000576613 CXCL9Q07325 125 aa15.32■□□□□ 0.04
CTDNEP1-212ENST00000576613 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
CTDNEP1-212ENST00000576613 SLC51AQ86UW1 340 aa15.32■□□□□ 0.04
CTDNEP1-212ENST00000576613 RTFDC1Q9BY42 306 aaPredicted RBP15.32■□□□□ 0.04
CTDNEP1-212ENST00000576613 CA12O43570 354 aa15.31■□□□□ 0.04
CTDNEP1-212ENST00000576613 EIF2S2P20042 333 aaKnown RBP15.31■□□□□ 0.04
CTDNEP1-212ENST00000576613 GMPSP49915 693 aaPredicted RBP15.31■□□□□ 0.04
CTDNEP1-212ENST00000576613 HSP90AB3PQ58FF7 597 aa15.31■□□□□ 0.04
CTDNEP1-212ENST00000576613 CELF2O95319 508 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 KIAA2012Q0VF49 1180 aa15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 TNIP1Q15025 636 aa15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 CIAPIN1Q6FI81 312 aa15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 LRP10Q7Z4F1 713 aa15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 SAPCD2Q86UD0 394 aa15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 SP8Q8IXZ3 490 aa15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 MPNDQ8N594 471 aa15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 HHIPL1Q96JK4 782 aa15.3■□□□□ 0.04
CTDNEP1-212ENST00000576613 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms