RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 LAMB2P55268 1798 aa15.47■□□□□ 0.07
LITAF-219ENST00000576334 HCLS1P14317 486 aaPredicted RBP15.47■□□□□ 0.07
LITAF-219ENST00000576334 CCDC93Q567U6 631 aa15.47■□□□□ 0.07
LITAF-219ENST00000576334 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
LITAF-219ENST00000576334 TSPYL6Q8N831 410 aa15.47■□□□□ 0.07
LITAF-219ENST00000576334 TSR2Q969E8 191 aaKnown RBP15.47■□□□□ 0.07
LITAF-219ENST00000576334 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
LITAF-219ENST00000576334 ZNF277Q9NRM2 450 aaPredicted RBP15.47■□□□□ 0.07
LITAF-219ENST00000576334 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
LITAF-219ENST00000576334 LTBP3Q9NS15 1303 aa15.46■□□□□ 0.07
LITAF-219ENST00000576334 TAF1P21675 1872 aa15.46■□□□□ 0.07
LITAF-219ENST00000576334 ATP5J2-PTCD1G3V325 749 aa15.46■□□□□ 0.07
LITAF-219ENST00000576334 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
LITAF-219ENST00000576334 PPP1R42Q7Z4L9 355 aa15.46■□□□□ 0.07
LITAF-219ENST00000576334 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
LITAF-219ENST00000576334 PHAXQ9H814 394 aaKnown RBP15.46■□□□□ 0.07
LITAF-219ENST00000576334 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
LITAF-219ENST00000576334 IBTKQ9P2D0 1353 aaPredicted RBP15.46■□□□□ 0.07
LITAF-219ENST00000576334 ANP32CO43423 234 aa15.45■□□□□ 0.06
LITAF-219ENST00000576334 DDNO94850 711 aaPredicted RBP15.45■□□□□ 0.06
LITAF-219ENST00000576334 GNAI1P63096 354 aa15.45■□□□□ 0.06
LITAF-219ENST00000576334 HTRA3P83110 453 aa15.45■□□□□ 0.06
LITAF-219ENST00000576334 PARP10Q53GL7 1025 aa15.45■□□□□ 0.06
LITAF-219ENST00000576334 C16orf71Q8IYS4 520 aaPredicted RBP15.45■□□□□ 0.06
LITAF-219ENST00000576334 DBF4Q9UBU7 674 aaPredicted RBP15.45■□□□□ 0.06
LITAF-219ENST00000576334 ZC3H4Q9UPT8 1303 aaKnown RBP15.44■□□□□ 0.06
LITAF-219ENST00000576334 RIC1Q4ADV7 1423 aa15.44■□□□□ 0.06
LITAF-219ENST00000576334 SNED1Q8TER0 1413 aa15.44■□□□□ 0.06
LITAF-219ENST00000576334 HOXB7P09629 217 aa15.44■□□□□ 0.06
LITAF-219ENST00000576334 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
LITAF-219ENST00000576334 FKBP4Q02790 459 aaKnown RBP eCLIP15.44■□□□□ 0.06
LITAF-219ENST00000576334 RTL5Q5HYW3 569 aaPredicted RBP15.44■□□□□ 0.06
LITAF-219ENST00000576334 ANKRD13DQ6ZTN6 518 aa15.44■□□□□ 0.06
LITAF-219ENST00000576334 TRMT112Q9UI30 125 aaKnown RBP15.44■□□□□ 0.06
LITAF-219ENST00000576334 COL4A5P29400 1685 aa15.44■□□□□ 0.06
LITAF-219ENST00000576334 HOXA10P31260 410 aaPredicted RBP15.43■□□□□ 0.06
LITAF-219ENST00000576334 SLC10A5Q5PT55 438 aa15.43■□□□□ 0.06
LITAF-219ENST00000576334 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
LITAF-219ENST00000576334 WWC1Q8IX03 1113 aa15.43■□□□□ 0.06
LITAF-219ENST00000576334 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
LITAF-219ENST00000576334 RBM46Q8TBY0 533 aaKnown RBP15.43■□□□□ 0.06
LITAF-219ENST00000576334 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
LITAF-219ENST00000576334 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
LITAF-219ENST00000576334 COL4A1P02462 1669 aa15.42■□□□□ 0.06
LITAF-219ENST00000576334 VEGFAP15692 232 aaPredicted RBP15.42■□□□□ 0.06
LITAF-219ENST00000576334 HSP90AB3PQ58FF7 597 aa15.42■□□□□ 0.06
LITAF-219ENST00000576334 RBM17Q96I25 401 aaKnown RBP15.42■□□□□ 0.06
LITAF-219ENST00000576334 NLRP3Q96P20 1036 aa15.42■□□□□ 0.06
LITAF-219ENST00000576334 HYPKQ9NX55 129 aa15.42■□□□□ 0.06
LITAF-219ENST00000576334 WDR90Q96KV7 1748 aa15.42■□□□□ 0.06
LITAF-219ENST00000576334 PPEF1O14829 653 aaPredicted RBP15.41■□□□□ 0.06
LITAF-219ENST00000576334 POTEIP0CG38 1075 aa15.41■□□□□ 0.06
LITAF-219ENST00000576334 POTEJP0CG39 1038 aa15.41■□□□□ 0.06
LITAF-219ENST00000576334 DPY19L2Q6NUT2 758 aa15.41■□□□□ 0.06
LITAF-219ENST00000576334 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
LITAF-219ENST00000576334 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
LITAF-219ENST00000576334 ABCC4O15439 1325 aa15.41■□□□□ 0.06
LITAF-219ENST00000576334 CALD1Q05682 793 aaKnown RBP15.4■□□□□ 0.06
LITAF-219ENST00000576334 RTKN2Q8IZC4 609 aa15.4■□□□□ 0.06
LITAF-219ENST00000576334 JARID2Q92833 1246 aaPredicted RBP15.4■□□□□ 0.06
LITAF-219ENST00000576334 CRAMP1Q96RY5 1269 aa15.4■□□□□ 0.06
LITAF-219ENST00000576334 SH3TC1Q8TE82 1336 aa15.4■□□□□ 0.06
LITAF-219ENST00000576334 IARSP41252 1262 aaKnown RBP15.39■□□□□ 0.05
LITAF-219ENST00000576334 RIC3Q7Z5B4 369 aa15.39■□□□□ 0.05
LITAF-219ENST00000576334 FAM9BQ8IZU0 186 aa15.39■□□□□ 0.05
LITAF-219ENST00000576334 CCDC27Q2M243 656 aa15.38■□□□□ 0.05
LITAF-219ENST00000576334 MYD88Q99836 296 aa15.38■□□□□ 0.05
LITAF-219ENST00000576334 G2E3Q7L622 706 aa15.37■□□□□ 0.05
LITAF-219ENST00000576334 PSMD1Q99460 953 aa15.37■□□□□ 0.05
LITAF-219ENST00000576334 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
LITAF-219ENST00000576334 PCNTO95613 3336 aa15.37■□□□□ 0.05
LITAF-219ENST00000576334 FZD9O00144 591 aa15.36■□□□□ 0.05
LITAF-219ENST00000576334 APLP1P51693 650 aa15.36■□□□□ 0.05
LITAF-219ENST00000576334 GOLGA2Q08379 1002 aa15.36■□□□□ 0.05
LITAF-219ENST00000576334 FSTL1Q12841 308 aa15.36■□□□□ 0.05
LITAF-219ENST00000576334 DNAJC5GQ8N7S2 189 aa15.36■□□□□ 0.05
LITAF-219ENST00000576334 SMC1BQ8NDV3 1235 aa15.36■□□□□ 0.05
LITAF-219ENST00000576334 ATP6V0A2Q9Y487 856 aa15.36■□□□□ 0.05
LITAF-219ENST00000576334 RNF123Q5XPI4 1314 aa15.36■□□□□ 0.05
LITAF-219ENST00000576334 AOC3Q16853 763 aa15.35■□□□□ 0.05
LITAF-219ENST00000576334 TWISTNBQ3B726 338 aaPredicted RBP15.35■□□□□ 0.05
LITAF-219ENST00000576334 CCDC30Q5VVM6 783 aa15.35■□□□□ 0.05
LITAF-219ENST00000576334 CELF1Q92879 486 aaKnown RBP15.35■□□□□ 0.05
LITAF-219ENST00000576334 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
LITAF-219ENST00000576334 IRS4O14654 1257 aaPredicted RBP15.34■□□□□ 0.05
LITAF-219ENST00000576334 CC2D2BQ6DHV5 1058 aa15.34■□□□□ 0.05
LITAF-219ENST00000576334 DDX46Q7L014 1031 aaKnown RBP15.34■□□□□ 0.05
LITAF-219ENST00000576334 LARGE2Q8N3Y3 721 aa15.34■□□□□ 0.05
LITAF-219ENST00000576334 MAP3K2Q9Y2U5 619 aa15.34■□□□□ 0.05
LITAF-219ENST00000576334 GJA3Q9Y6H8 435 aa15.34■□□□□ 0.05
LITAF-219ENST00000576334 PI4KAP2A4QPH2 592 aa15.33■□□□□ 0.04
LITAF-219ENST00000576334 TRIM28Q13263 835 aaKnown RBP15.33■□□□□ 0.04
LITAF-219ENST00000576334 GRAPQ13588 217 aa15.33■□□□□ 0.04
LITAF-219ENST00000576334 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.04
LITAF-219ENST00000576334 GRAPLQ8TC17 118 aaPredicted RBP15.33■□□□□ 0.04
LITAF-219ENST00000576334 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
LITAF-219ENST00000576334 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
LITAF-219ENST00000576334 TAF1DQ9H5J8 278 aaPredicted RBP15.33■□□□□ 0.04
LITAF-219ENST00000576334 LTBP1Q14766 1721 aa15.33■□□□□ 0.04
LITAF-219ENST00000576334 PPIP5K2O43314 1243 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms