RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 MYD88Q99836 296 aa22.75■■□□□ 1.23
CLDN7-208ENST00000575313 BCAR3O75815 825 aa22.74■■□□□ 1.23
CLDN7-208ENST00000575313 ERFEQ4G0M1 354 aa22.74■■□□□ 1.23
CLDN7-208ENST00000575313 NUTM1Q86Y26 1132 aa22.74■■□□□ 1.23
CLDN7-208ENST00000575313 C2CD5Q86YS7 1000 aa22.74■■□□□ 1.23
CLDN7-208ENST00000575313 MRPL50Q8N5N7 158 aaKnown RBP22.74■■□□□ 1.23
CLDN7-208ENST00000575313 BCL2L13Q9BXK5 485 aa22.74■■□□□ 1.23
CLDN7-208ENST00000575313 SMC4Q9NTJ3 1288 aa22.74■■□□□ 1.23
CLDN7-208ENST00000575313 TRMT112Q9UI30 125 aaKnown RBP22.74■■□□□ 1.23
CLDN7-208ENST00000575313 RIC1Q4ADV7 1423 aa22.74■■□□□ 1.23
CLDN7-208ENST00000575313 N4BP2Q86UW6 1770 aaPredicted RBP22.73■■□□□ 1.23
CLDN7-208ENST00000575313 ANKRD31Q8N7Z5 1873 aa22.73■■□□□ 1.23
CLDN7-208ENST00000575313 CHRNA5P30532 468 aa22.73■■□□□ 1.23
CLDN7-208ENST00000575313 GPR162Q16538 588 aa22.73■■□□□ 1.23
CLDN7-208ENST00000575313 CCDC191Q8NCU4 936 aa22.73■■□□□ 1.23
CLDN7-208ENST00000575313 PIM2Q9P1W9 311 aa22.73■■□□□ 1.23
CLDN7-208ENST00000575313 KCNA3P22001 575 aa22.72■■□□□ 1.23
CLDN7-208ENST00000575313 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
CLDN7-208ENST00000575313 DNAAF4Q8WXU2 420 aa22.72■■□□□ 1.23
CLDN7-208ENST00000575313 SH3TC1Q8TE82 1336 aa22.72■■□□□ 1.23
CLDN7-208ENST00000575313 ABCC12Q96J65 1359 aa22.72■■□□□ 1.23
CLDN7-208ENST00000575313 KLRG2A4D1S0 409 aaPredicted RBP22.71■■□□□ 1.23
CLDN7-208ENST00000575313 SLC10A5Q5PT55 438 aa22.71■■□□□ 1.23
CLDN7-208ENST00000575313 CWC25Q9NXE8 425 aaPredicted RBP22.71■■□□□ 1.23
CLDN7-208ENST00000575313 PTPRCP08575 1304 aa22.71■■□□□ 1.23
CLDN7-208ENST00000575313 BRPF1P55201 1214 aaPredicted RBP22.69■■□□□ 1.22
CLDN7-208ENST00000575313 DALRD3Q5D0E6 543 aaKnown RBP22.69■■□□□ 1.22
CLDN7-208ENST00000575313 DLEC1Q9Y238 1755 aa22.68■■□□□ 1.22
CLDN7-208ENST00000575313 GRIN3BO60391 1043 aa22.68■■□□□ 1.22
CLDN7-208ENST00000575313 IGKV5-2P06315 115 aa22.68■■□□□ 1.22
CLDN7-208ENST00000575313 SRGNP10124 158 aa22.68■■□□□ 1.22
CLDN7-208ENST00000575313 STYK1Q6J9G0 422 aa22.68■■□□□ 1.22
CLDN7-208ENST00000575313 ZBTB38Q8NAP3 1195 aaPredicted RBP22.68■■□□□ 1.22
CLDN7-208ENST00000575313 LINS1Q8NG48 757 aa22.68■■□□□ 1.22
CLDN7-208ENST00000575313 MASTLQ96GX5 879 aa22.68■■□□□ 1.22
CLDN7-208ENST00000575313 BCS1LQ9Y276 419 aa22.68■■□□□ 1.22
CLDN7-208ENST00000575313 SUPT16HQ9Y5B9 1047 aaKnown RBP22.68■■□□□ 1.22
CLDN7-208ENST00000575313 BRCA1P38398 1863 aaKnown RBP22.68■■□□□ 1.22
CLDN7-208ENST00000575313 HSP90B1P14625 803 aaKnown RBP22.67■■□□□ 1.22
CLDN7-208ENST00000575313 NPR1P16066 1061 aa22.67■■□□□ 1.22
CLDN7-208ENST00000575313 YBX3P16989 372 aaKnown RBP eCLIP22.67■■□□□ 1.22
CLDN7-208ENST00000575313 CRY2Q49AN0 593 aa22.67■■□□□ 1.22
CLDN7-208ENST00000575313 ZNF622Q969S3 477 aaKnown RBP eCLIP22.67■■□□□ 1.22
CLDN7-208ENST00000575313 NLRP3Q96P20 1036 aa22.67■■□□□ 1.22
CLDN7-208ENST00000575313 WWC3Q9ULE0 1092 aa22.67■■□□□ 1.22
CLDN7-208ENST00000575313 COL11A2P13942 1736 aaPredicted RBP22.66■■□□□ 1.22
CLDN7-208ENST00000575313 NEURL1BA8MQ27 555 aa22.66■■□□□ 1.22
CLDN7-208ENST00000575313 F6X3S4 739 aa22.66■■□□□ 1.22
CLDN7-208ENST00000575313 TTLL6Q8N841 843 aa22.66■■□□□ 1.22
CLDN7-208ENST00000575313 FRAT1Q92837 279 aaPredicted RBP22.66■■□□□ 1.22
CLDN7-208ENST00000575313 CNKSR1Q969H4 720 aa22.66■■□□□ 1.22
CLDN7-208ENST00000575313 FAM89AQ96GI7 184 aa22.66■■□□□ 1.22
CLDN7-208ENST00000575313 NOB1Q9ULX3 412 aaKnown RBP22.66■■□□□ 1.22
CLDN7-208ENST00000575313 TNRC6CQ9HCJ0 1690 aaKnown RBP22.65■■□□□ 1.22
CLDN7-208ENST00000575313 PCCAP05165 728 aaPredicted RBP22.65■■□□□ 1.22
CLDN7-208ENST00000575313 CWF19L2Q2TBE0 894 aaKnown RBP22.65■■□□□ 1.22
CLDN7-208ENST00000575313 KIF16BQ96L93 1317 aa22.64■■□□□ 1.22
CLDN7-208ENST00000575313 HCLS1P14317 486 aaPredicted RBP22.64■■□□□ 1.21
CLDN7-208ENST00000575313 SYNE4Q8N205 404 aa22.64■■□□□ 1.21
CLDN7-208ENST00000575313 RPGRQ92834 1020 aaKnown RBP22.64■■□□□ 1.21
CLDN7-208ENST00000575313 GCKRQ14397 625 aa22.63■■□□□ 1.21
CLDN7-208ENST00000575313 BEND3Q5T5X7 828 aa22.63■■□□□ 1.21
CLDN7-208ENST00000575313 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.63■■□□□ 1.21
CLDN7-208ENST00000575313 IRS4O14654 1257 aaPredicted RBP22.62■■□□□ 1.21
CLDN7-208ENST00000575313 IPO8O15397 1037 aaKnown RBP22.62■■□□□ 1.21
CLDN7-208ENST00000575313 PLIN1O60240 522 aa22.62■■□□□ 1.21
CLDN7-208ENST00000575313 ALDH1B1P30837 517 aa22.62■■□□□ 1.21
CLDN7-208ENST00000575313 HOXA10P31260 410 aaPredicted RBP22.62■■□□□ 1.21
CLDN7-208ENST00000575313 RTL5Q5HYW3 569 aaPredicted RBP22.62■■□□□ 1.21
CLDN7-208ENST00000575313 SLC4A10Q6U841 1118 aa22.62■■□□□ 1.21
CLDN7-208ENST00000575313 CDHR2Q9BYE9 1310 aa22.61■■□□□ 1.21
CLDN7-208ENST00000575313 ALDH1L1O75891 902 aa22.61■■□□□ 1.21
CLDN7-208ENST00000575313 RRP1P56182 461 aaKnown RBP22.61■■□□□ 1.21
CLDN7-208ENST00000575313 API5Q9BZZ5 524 aaKnown RBP22.61■■□□□ 1.21
CLDN7-208ENST00000575313 SRCIN1Q9C0H9 1055 aa22.61■■□□□ 1.21
CLDN7-208ENST00000575313 ARFGEF1Q9Y6D6 1849 aa22.6■■□□□ 1.21
CLDN7-208ENST00000575313 ZKSCAN2Q63HK3 967 aa22.6■■□□□ 1.21
CLDN7-208ENST00000575313 C3orf67Q6ZVT6 689 aa22.6■■□□□ 1.21
CLDN7-208ENST00000575313 ARHGAP45Q92619 1136 aa22.6■■□□□ 1.21
CLDN7-208ENST00000575313 RBM17Q96I25 401 aaKnown RBP22.6■■□□□ 1.21
CLDN7-208ENST00000575313 LAMB2P55268 1798 aa22.59■■□□□ 1.21
CLDN7-208ENST00000575313 H7C1W4 665 aa22.59■■□□□ 1.21
CLDN7-208ENST00000575313 PRPF40BQ6NWY9 871 aaKnown RBP22.59■■□□□ 1.21
CLDN7-208ENST00000575313 CRAMP1Q96RY5 1269 aa22.59■■□□□ 1.21
CLDN7-208ENST00000575313 DDX60Q8IY21 1712 aaKnown RBP22.59■■□□□ 1.21
CLDN7-208ENST00000575313 PDE8AO60658 829 aa22.58■■□□□ 1.21
CLDN7-208ENST00000575313 SF3B3Q15393 1217 aaKnown RBP22.58■■□□□ 1.21
CLDN7-208ENST00000575313 ATF7IPQ6VMQ6 1270 aa22.58■■□□□ 1.21
CLDN7-208ENST00000575313 UBE3BQ7Z3V4 1068 aa22.57■■□□□ 1.2
CLDN7-208ENST00000575313 SOGA3Q5TF21 947 aa22.56■■□□□ 1.2
CLDN7-208ENST00000575313 DDX46Q7L014 1031 aaKnown RBP22.56■■□□□ 1.2
CLDN7-208ENST00000575313 JARID2Q92833 1246 aaPredicted RBP22.56■■□□□ 1.2
CLDN7-208ENST00000575313 TNNQ9UQP3 1299 aa22.56■■□□□ 1.2
CLDN7-208ENST00000575313 GRM8O00222 908 aa22.55■■□□□ 1.2
CLDN7-208ENST00000575313 TRIM27P14373 513 aa22.55■■□□□ 1.2
CLDN7-208ENST00000575313 ARHGAP27Q6ZUM4 889 aa22.55■■□□□ 1.2
CLDN7-208ENST00000575313 C9orf78Q9NZ63 289 aaPredicted RBP22.55■■□□□ 1.2
CLDN7-208ENST00000575313 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
CLDN7-208ENST00000575313 C21orf2O43822 256 aa22.54■■□□□ 1.2
CLDN7-208ENST00000575313 CCT4P50991 539 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms