RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 TNRC6CQ9HCJ0 1690 aaKnown RBP21.37■■□□□ 1.01
TVP23B-206ENST00000574226 NTSR2O95665 410 aa21.37■■□□□ 1.01
TVP23B-206ENST00000574226 HOXA10P31260 410 aaPredicted RBP21.37■■□□□ 1.01
TVP23B-206ENST00000574226 AIMP1Q12904 312 aaKnown RBP21.37■■□□□ 1.01
TVP23B-206ENST00000574226 GRIPAP1Q4V328 841 aa21.37■■□□□ 1.01
TVP23B-206ENST00000574226 CCDC184Q52MB2 194 aa21.37■■□□□ 1.01
TVP23B-206ENST00000574226 CC2D2BQ6DHV5 1058 aa21.37■■□□□ 1.01
TVP23B-206ENST00000574226 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
TVP23B-206ENST00000574226 RPGRQ92834 1020 aaKnown RBP21.37■■□□□ 1.01
TVP23B-206ENST00000574226 ZNF219Q9P2Y4 722 aaPredicted RBP21.37■■□□□ 1.01
TVP23B-206ENST00000574226 TCIRG1Q13488 830 aa21.36■■□□□ 1.01
TVP23B-206ENST00000574226 SLC10A5Q5PT55 438 aa21.36■■□□□ 1.01
TVP23B-206ENST00000574226 DPY19L2Q6NUT2 758 aa21.36■■□□□ 1.01
TVP23B-206ENST00000574226 C16orf71Q8IYS4 520 aaPredicted RBP21.36■■□□□ 1.01
TVP23B-206ENST00000574226 PLBD2Q8NHP8 589 aa21.36■■□□□ 1.01
TVP23B-206ENST00000574226 NLRP3Q96P20 1036 aa21.36■■□□□ 1.01
TVP23B-206ENST00000574226 ABCC12Q96J65 1359 aa21.36■■□□□ 1.01
TVP23B-206ENST00000574226 GLTPD2A6NH11 291 aa21.35■■□□□ 1.01
TVP23B-206ENST00000574226 ANKRD13DQ6ZTN6 518 aa21.35■■□□□ 1.01
TVP23B-206ENST00000574226 NMRK2Q9NPI5 230 aa21.35■■□□□ 1.01
TVP23B-206ENST00000574226 TIAM2Q8IVF5 1701 aa21.35■■□□□ 1.01
TVP23B-206ENST00000574226 RBM17Q96I25 401 aaKnown RBP21.34■■□□□ 1.01
TVP23B-206ENST00000574226 CRAMP1Q96RY5 1269 aa21.34■■□□□ 1.01
TVP23B-206ENST00000574226 IL16Q14005 1332 aa21.33■■□□□ 1.01
TVP23B-206ENST00000574226 PRELPP51888 382 aa21.33■■□□□ 1.01
TVP23B-206ENST00000574226 NLRP10Q86W26 655 aa21.33■■□□□ 1.01
TVP23B-206ENST00000574226 RBM46Q8TBY0 533 aaKnown RBP21.33■■□□□ 1.01
TVP23B-206ENST00000574226 FKBP4Q02790 459 aaKnown RBP eCLIP21.32■■□□□ 1
TVP23B-206ENST00000574226 WWC1Q8IX03 1113 aa21.32■■□□□ 1
TVP23B-206ENST00000574226 SH3TC1Q8TE82 1336 aa21.31■■□□□ 1
TVP23B-206ENST00000574226 VEGFAP15692 232 aaPredicted RBP21.31■■□□□ 1
TVP23B-206ENST00000574226 HSPA6P17066 643 aa21.31■■□□□ 1
TVP23B-206ENST00000574226 CCDC30Q5VVM6 783 aa21.31■■□□□ 1
TVP23B-206ENST00000574226 TMX4Q9H1E5 349 aaPredicted RBP21.31■■□□□ 1
TVP23B-206ENST00000574226 TRMT112Q9UI30 125 aaKnown RBP21.31■■□□□ 1
TVP23B-206ENST00000574226 RRAGCQ9HB90 399 aa21.3■■□□□ 1
TVP23B-206ENST00000574226 GOLGA2Q08379 1002 aa21.29■■□□□ 1
TVP23B-206ENST00000574226 TRIM28Q13263 835 aaKnown RBP21.29■■□□□ 1
TVP23B-206ENST00000574226 PSMD1Q99460 953 aa21.29■■□□□ 1
TVP23B-206ENST00000574226 HSP90B1P14625 803 aaKnown RBP21.28■■□□□ 1
TVP23B-206ENST00000574226 FSTL1Q12841 308 aa21.28■■□□□ 1
TVP23B-206ENST00000574226 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
TVP23B-206ENST00000574226 ISCA1Q9BUE6 129 aa21.28■■□□□ 1
TVP23B-206ENST00000574226 ELL2O00472 640 aaPredicted RBP21.27■■□□□ 1
TVP23B-206ENST00000574226 DDX58O95786 925 aaKnown RBP21.27■■□□□ 1
TVP23B-206ENST00000574226 RIC3Q7Z5B4 369 aa21.27■■□□□ 1
TVP23B-206ENST00000574226 WDR63Q8IWG1 891 aa21.27■■□□□ 1
TVP23B-206ENST00000574226 WDR90Q96KV7 1748 aa21.26■□□□□ 0.99
TVP23B-206ENST00000574226 BBOX1O75936 387 aa21.25■□□□□ 0.99
TVP23B-206ENST00000574226 STK31Q9BXU1 1019 aa21.25■□□□□ 0.99
TVP23B-206ENST00000574226 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
TVP23B-206ENST00000574226 APLP1P51693 650 aa21.24■□□□□ 0.99
TVP23B-206ENST00000574226 TMC4Q7Z404 712 aa21.24■□□□□ 0.99
TVP23B-206ENST00000574226 SYNE4Q8N205 404 aa21.24■□□□□ 0.99
TVP23B-206ENST00000574226 SNED1Q8TER0 1413 aa21.23■□□□□ 0.99
TVP23B-206ENST00000574226 HCLS1P14317 486 aaPredicted RBP21.23■□□□□ 0.99
TVP23B-206ENST00000574226 IARSP41252 1262 aaKnown RBP21.23■□□□□ 0.99
TVP23B-206ENST00000574226 DDX46Q7L014 1031 aaKnown RBP21.23■□□□□ 0.99
TVP23B-206ENST00000574226 SMC1BQ8NDV3 1235 aa21.23■□□□□ 0.99
TVP23B-206ENST00000574226 JDP2Q8WYK2 163 aa21.23■□□□□ 0.99
TVP23B-206ENST00000574226 TSR2Q969E8 191 aaKnown RBP21.23■□□□□ 0.99
TVP23B-206ENST00000574226 VPS33BQ9H267 617 aa21.23■□□□□ 0.99
TVP23B-206ENST00000574226 ZNF277Q9NRM2 450 aaPredicted RBP21.23■□□□□ 0.99
TVP23B-206ENST00000574226 CACNA1FO60840 1977 aa21.23■□□□□ 0.99
TVP23B-206ENST00000574226 LAMB2P55268 1798 aa21.23■□□□□ 0.99
TVP23B-206ENST00000574226 IQCA1LA6NCM1 817 aa21.22■□□□□ 0.99
TVP23B-206ENST00000574226 TWISTNBQ3B726 338 aaPredicted RBP21.22■□□□□ 0.99
TVP23B-206ENST00000574226 C3orf67Q6ZVT6 689 aa21.22■□□□□ 0.99
TVP23B-206ENST00000574226 PHAXQ9H814 394 aaKnown RBP21.22■□□□□ 0.99
TVP23B-206ENST00000574226 ATP6V0A2Q9Y487 856 aa21.22■□□□□ 0.99
TVP23B-206ENST00000574226 OLFM4Q6UX06 510 aa21.21■□□□□ 0.99
TVP23B-206ENST00000574226 TSPYL6Q8N831 410 aa21.21■□□□□ 0.99
TVP23B-206ENST00000574226 CCDC191Q8NCU4 936 aa21.21■□□□□ 0.99
TVP23B-206ENST00000574226 ABCC4O15439 1325 aa21.21■□□□□ 0.99
TVP23B-206ENST00000574226 ATP5J2-PTCD1G3V325 749 aa21.2■□□□□ 0.98
TVP23B-206ENST00000574226 SP8Q8IXZ3 490 aa21.2■□□□□ 0.98
TVP23B-206ENST00000574226 ZBTB38Q8NAP3 1195 aaPredicted RBP21.2■□□□□ 0.98
TVP23B-206ENST00000574226 SUPT20HQ8NEM7 779 aa21.2■□□□□ 0.98
TVP23B-206ENST00000574226 L3MBTL3Q96JM7 780 aaPredicted RBP21.2■□□□□ 0.98
TVP23B-206ENST00000574226 SCN4AP35499 1836 aa21.2■□□□□ 0.98
TVP23B-206ENST00000574226 FZD9O00144 591 aa21.19■□□□□ 0.98
TVP23B-206ENST00000574226 GRAPQ13588 217 aa21.19■□□□□ 0.98
TVP23B-206ENST00000574226 SF3B3Q15393 1217 aaKnown RBP21.19■□□□□ 0.98
TVP23B-206ENST00000574226 FAM9BQ8IZU0 186 aa21.19■□□□□ 0.98
TVP23B-206ENST00000574226 GRAPLQ8TC17 118 aaPredicted RBP21.19■□□□□ 0.98
TVP23B-206ENST00000574226 FAM89AQ96GI7 184 aa21.19■□□□□ 0.98
TVP23B-206ENST00000574226 METTL22Q9BUU2 404 aaPredicted RBP21.19■□□□□ 0.98
TVP23B-206ENST00000574226 DDX60Q8IY21 1712 aaKnown RBP21.18■□□□□ 0.98
TVP23B-206ENST00000574226 DDNO94850 711 aaPredicted RBP21.18■□□□□ 0.98
TVP23B-206ENST00000574226 KSR2Q6VAB6 950 aa21.18■□□□□ 0.98
TVP23B-206ENST00000574226 POTECB2RU33 542 aa21.17■□□□□ 0.98
TVP23B-206ENST00000574226 NEXNQ0ZGT2 675 aa21.17■□□□□ 0.98
TVP23B-206ENST00000574226 MYD88Q99836 296 aa21.17■□□□□ 0.98
TVP23B-206ENST00000574226 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
TVP23B-206ENST00000574226 CWC25Q9NXE8 425 aaPredicted RBP21.17■□□□□ 0.98
TVP23B-206ENST00000574226 FANCIQ9NVI1 1328 aa21.17■□□□□ 0.98
TVP23B-206ENST00000574226 CEP350Q5VT06 3117 aa21.16■□□□□ 0.98
TVP23B-206ENST00000574226 IRS4O14654 1257 aaPredicted RBP21.16■□□□□ 0.98
TVP23B-206ENST00000574226 GPC2Q8N158 579 aa21.16■□□□□ 0.98
TVP23B-206ENST00000574226 LARGE2Q8N3Y3 721 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms