RNA–Protein interactions for RNA: ENST00000573919.1

RNF213-217, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-217ENST00000573919 DDB1Q16531 1140 aa12.31□□□□□ -0.44
RNF213-217ENST00000573919 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
RNF213-217ENST00000573919 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
RNF213-217ENST00000573919 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
RNF213-217ENST00000573919 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
RNF213-217ENST00000573919 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
RNF213-217ENST00000573919 IFFO2Q5TF58 517 aa12.3□□□□□ -0.44
RNF213-217ENST00000573919 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
RNF213-217ENST00000573919 CFAP53Q96M91 514 aa12.3□□□□□ -0.44
RNF213-217ENST00000573919 TNS1Q9HBL0 1735 aaKnown RBP12.3□□□□□ -0.44
RNF213-217ENST00000573919 SBF2Q86WG5 1849 aa12.3□□□□□ -0.44
RNF213-217ENST00000573919 MEGF6O75095 1541 aa12.29□□□□□ -0.44
RNF213-217ENST00000573919 HLA-CQ95604 372 aa12.29□□□□□ -0.44
RNF213-217ENST00000573919 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
RNF213-217ENST00000573919 MTHFSP49914 203 aa12.28□□□□□ -0.44
RNF213-217ENST00000573919 GUCA2AQ02747 115 aa12.28□□□□□ -0.44
RNF213-217ENST00000573919 EIF4A2Q14240 407 aaKnown RBP12.28□□□□□ -0.44
RNF213-217ENST00000573919 PRPF38BQ5VTL8 546 aaKnown RBP12.28□□□□□ -0.44
RNF213-217ENST00000573919 NHSQ6T4R5 1651 aa12.28□□□□□ -0.44
RNF213-217ENST00000573919 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
RNF213-217ENST00000573919 RGPD4Q7Z3J3 1758 aa12.28□□□□□ -0.44
RNF213-217ENST00000573919 EXOC5O00471 708 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 TATP17735 454 aaPredicted RBP12.27□□□□□ -0.45
RNF213-217ENST00000573919 RALBP1Q15311 655 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 ZNF516Q92618 1163 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 THAP11Q96EK4 314 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 POLR3EQ9NVU0 708 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 LIMD1Q9UGP4 676 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 DOT1LQ8TEK3 1739 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 IGSF1Q8N6C5 1336 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 BCL9O00512 1426 aa12.27□□□□□ -0.45
RNF213-217ENST00000573919 SPDYE5A6NIY4 337 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 SF3B2Q13435 895 aaKnown RBP12.26□□□□□ -0.45
RNF213-217ENST00000573919 TMEM132AQ24JP5 1023 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 BRICD5Q6PL45 260 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 FAM196AQ6ZSG2 479 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 PCMTD1Q96MG8 357 aaPredicted RBP12.26□□□□□ -0.45
RNF213-217ENST00000573919 SPSB2Q99619 263 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 PCDHGC3Q9UN70 934 aa12.26□□□□□ -0.45
RNF213-217ENST00000573919 KAT6BQ8WYB5 2073 aa12.25□□□□□ -0.45
RNF213-217ENST00000573919 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
RNF213-217ENST00000573919 ADH1BP00325 375 aa12.25□□□□□ -0.45
RNF213-217ENST00000573919 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
RNF213-217ENST00000573919 ZBTB3Q9H5J0 574 aa12.25□□□□□ -0.45
RNF213-217ENST00000573919 PCDH11XQ9BZA7 1347 aa12.25□□□□□ -0.45
RNF213-217ENST00000573919 PCDH11YQ9BZA8 1340 aa12.25□□□□□ -0.45
RNF213-217ENST00000573919 PPP2R1AP30153 589 aa12.24□□□□□ -0.45
RNF213-217ENST00000573919 KDRP35968 1356 aa12.24□□□□□ -0.45
RNF213-217ENST00000573919 MTMR2Q13614 643 aa12.24□□□□□ -0.45
RNF213-217ENST00000573919 MYBBP1AQ9BQG0 1328 aaKnown RBP12.24□□□□□ -0.45
RNF213-217ENST00000573919 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
RNF213-217ENST00000573919 RNF19BQ6ZMZ0 732 aa12.23□□□□□ -0.45
RNF213-217ENST00000573919 RETREG3Q86VR2 466 aa12.23□□□□□ -0.45
RNF213-217ENST00000573919 ZCRB1Q8TBF4 217 aaKnown RBP12.23□□□□□ -0.45
RNF213-217ENST00000573919 NUDCQ9Y266 331 aa12.23□□□□□ -0.45
RNF213-217ENST00000573919 TLL1O43897 1013 aa12.22□□□□□ -0.45
RNF213-217ENST00000573919 IL13P35225 146 aa12.22□□□□□ -0.45
RNF213-217ENST00000573919 MSS51Q4VC12 460 aa12.22□□□□□ -0.45
RNF213-217ENST00000573919 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
RNF213-217ENST00000573919 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.22□□□□□ -0.45
RNF213-217ENST00000573919 SPG7Q9UQ90 795 aa12.22□□□□□ -0.45
RNF213-217ENST00000573919 PCDHB15Q9Y5E8 787 aa12.22□□□□□ -0.45
RNF213-217ENST00000573919 BTAF1O14981 1849 aa12.22□□□□□ -0.45
RNF213-217ENST00000573919 VIRMAQ69YN4 1812 aaKnown RBP12.21□□□□□ -0.46
RNF213-217ENST00000573919 U2SURPO15042 1029 aaKnown RBP12.2□□□□□ -0.46
RNF213-217ENST00000573919 LILRB3O75022 631 aa12.2□□□□□ -0.46
RNF213-217ENST00000573919 CSPP1Q1MSJ5 1256 aa12.2□□□□□ -0.46
RNF213-217ENST00000573919 MARCH10Q8NA82 808 aaPredicted RBP12.2□□□□□ -0.46
RNF213-217ENST00000573919 TOGARAM1Q9Y4F4 1720 aa12.2□□□□□ -0.46
RNF213-217ENST00000573919 RREB1Q92766 1687 aa12.19□□□□□ -0.46
RNF213-217ENST00000573919 ITGB4P16144 1822 aa12.19□□□□□ -0.46
RNF213-217ENST00000573919 GGCXP38435 758 aa12.19□□□□□ -0.46
RNF213-217ENST00000573919 BAG6P46379 1132 aa12.19□□□□□ -0.46
RNF213-217ENST00000573919 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
RNF213-217ENST00000573919 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
RNF213-217ENST00000573919 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
RNF213-217ENST00000573919 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
RNF213-217ENST00000573919 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
RNF213-217ENST00000573919 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
RNF213-217ENST00000573919 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
RNF213-217ENST00000573919 SLC6A16Q9GZN6 736 aa12.18□□□□□ -0.46
RNF213-217ENST00000573919 PRKRIP1Q9H875 184 aaPredicted RBP12.18□□□□□ -0.46
RNF213-217ENST00000573919 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
RNF213-217ENST00000573919 ANP32CO43423 234 aa12.17□□□□□ -0.46
RNF213-217ENST00000573919 TRIM37O94972 964 aa12.17□□□□□ -0.46
RNF213-217ENST00000573919 NEFMP07197 916 aa12.17□□□□□ -0.46
RNF213-217ENST00000573919 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
RNF213-217ENST00000573919 C1orf141Q5JVX7 400 aa12.17□□□□□ -0.46
RNF213-217ENST00000573919 AEBP1Q8IUX7 1158 aa12.17□□□□□ -0.46
RNF213-217ENST00000573919 SYMPKQ92797 1274 aaKnown RBP12.17□□□□□ -0.46
RNF213-217ENST00000573919 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
RNF213-217ENST00000573919 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
RNF213-217ENST00000573919 QPCTQ16769 361 aa12.16□□□□□ -0.46
RNF213-217ENST00000573919 PPP2R2DQ66LE6 453 aa12.16□□□□□ -0.46
RNF213-217ENST00000573919 ZNF530Q6P9A1 599 aaPredicted RBP12.16□□□□□ -0.46
RNF213-217ENST00000573919 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms