RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OLFM4Q6UX06 510 aa16.47■□□□□ 0.23
NPLOC4-213ENST00000573519 LTBP3Q9NS15 1303 aa16.46■□□□□ 0.23
NPLOC4-213ENST00000573519 FER1L6Q2WGJ9 1857 aa16.46■□□□□ 0.23
NPLOC4-213ENST00000573519 GLTPD2A6NH11 291 aa16.46■□□□□ 0.23
NPLOC4-213ENST00000573519 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
NPLOC4-213ENST00000573519 C7orf43Q8WVR3 580 aa16.46■□□□□ 0.23
NPLOC4-213ENST00000573519 ZNF428Q96B54 188 aa16.46■□□□□ 0.23
NPLOC4-213ENST00000573519 HSPA6P17066 643 aa16.45■□□□□ 0.22
NPLOC4-213ENST00000573519 TCIRG1Q13488 830 aa16.45■□□□□ 0.22
NPLOC4-213ENST00000573519 DPY19L2Q6NUT2 758 aa16.45■□□□□ 0.22
NPLOC4-213ENST00000573519 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
NPLOC4-213ENST00000573519 NLRP3Q96P20 1036 aa16.45■□□□□ 0.22
NPLOC4-213ENST00000573519 HYPKQ9NX55 129 aa16.45■□□□□ 0.22
NPLOC4-213ENST00000573519 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
NPLOC4-213ENST00000573519 CCDC88AQ3V6T2 1871 aa16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 FKBP4Q02790 459 aaKnown RBP eCLIP16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 ANKRD13DQ6ZTN6 518 aa16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 RTKN2Q8IZC4 609 aa16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-213ENST00000573519 ANKRD36CQ5JPF3 1778 aa16.43■□□□□ 0.22
NPLOC4-213ENST00000573519 C8orf58Q8NAV2 365 aa16.43■□□□□ 0.22
NPLOC4-213ENST00000573519 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
NPLOC4-213ENST00000573519 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
NPLOC4-213ENST00000573519 PPEF1O14829 653 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-213ENST00000573519 HCLS1P14317 486 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-213ENST00000573519 VEGFAP15692 232 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-213ENST00000573519 HOXA10P31260 410 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-213ENST00000573519 RBM46Q8TBY0 533 aaKnown RBP16.42■□□□□ 0.22
NPLOC4-213ENST00000573519 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-213ENST00000573519 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
NPLOC4-213ENST00000573519 ATP5J2-PTCD1G3V325 749 aa16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 SLC10A5Q5PT55 438 aa16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 WWC1Q8IX03 1113 aa16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 SYNE4Q8N205 404 aa16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
NPLOC4-213ENST00000573519 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
NPLOC4-213ENST00000573519 TMX4Q9H1E5 349 aaPredicted RBP16.4■□□□□ 0.22
NPLOC4-213ENST00000573519 DDNO94850 711 aaPredicted RBP16.39■□□□□ 0.21
NPLOC4-213ENST00000573519 IARSP41252 1262 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-213ENST00000573519 CCDC30Q5VVM6 783 aa16.39■□□□□ 0.21
NPLOC4-213ENST00000573519 CC2D2BQ6DHV5 1058 aa16.39■□□□□ 0.21
NPLOC4-213ENST00000573519 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
NPLOC4-213ENST00000573519 TSPYL6Q8N831 410 aa16.39■□□□□ 0.21
NPLOC4-213ENST00000573519 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-213ENST00000573519 FSTL1Q12841 308 aa16.38■□□□□ 0.21
NPLOC4-213ENST00000573519 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
NPLOC4-213ENST00000573519 SLC51AQ86UW1 340 aa16.38■□□□□ 0.21
NPLOC4-213ENST00000573519 ISCA1Q9BUE6 129 aa16.38■□□□□ 0.21
NPLOC4-213ENST00000573519 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
NPLOC4-213ENST00000573519 ABCC4O15439 1325 aa16.38■□□□□ 0.21
NPLOC4-213ENST00000573519 APLP1P51693 650 aa16.37■□□□□ 0.21
NPLOC4-213ENST00000573519 DDX46Q7L014 1031 aaKnown RBP16.37■□□□□ 0.21
NPLOC4-213ENST00000573519 SMC1BQ8NDV3 1235 aa16.37■□□□□ 0.21
NPLOC4-213ENST00000573519 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
NPLOC4-213ENST00000573519 PSMD1Q99460 953 aa16.37■□□□□ 0.21
NPLOC4-213ENST00000573519 WDR90Q96KV7 1748 aa16.36■□□□□ 0.21
NPLOC4-213ENST00000573519 POTECB2RU33 542 aa16.36■□□□□ 0.21
NPLOC4-213ENST00000573519 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
NPLOC4-213ENST00000573519 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
NPLOC4-213ENST00000573519 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
NPLOC4-213ENST00000573519 MYD88Q99836 296 aa16.36■□□□□ 0.21
NPLOC4-213ENST00000573519 STK31Q9BXU1 1019 aa16.36■□□□□ 0.21
NPLOC4-213ENST00000573519 ZNF541Q9H0D2 1346 aa16.36■□□□□ 0.21
NPLOC4-213ENST00000573519 GRIPAP1Q4V328 841 aa16.35■□□□□ 0.21
NPLOC4-213ENST00000573519 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
NPLOC4-213ENST00000573519 IL16Q14005 1332 aa16.35■□□□□ 0.21
NPLOC4-213ENST00000573519 LAMB2P55268 1798 aa16.35■□□□□ 0.21
NPLOC4-213ENST00000573519 SNED1Q8TER0 1413 aa16.35■□□□□ 0.21
NPLOC4-213ENST00000573519 LARGE2Q8N3Y3 721 aa16.34■□□□□ 0.21
NPLOC4-213ENST00000573519 IQCA1LA6NCM1 817 aa16.33■□□□□ 0.2
NPLOC4-213ENST00000573519 IRS4O14654 1257 aaPredicted RBP16.33■□□□□ 0.2
NPLOC4-213ENST00000573519 BBOX1O75936 387 aa16.33■□□□□ 0.2
NPLOC4-213ENST00000573519 GRAPQ13588 217 aa16.33■□□□□ 0.2
NPLOC4-213ENST00000573519 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
NPLOC4-213ENST00000573519 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
NPLOC4-213ENST00000573519 FANCIQ9NVI1 1328 aa16.33■□□□□ 0.2
NPLOC4-213ENST00000573519 FZD9O00144 591 aa16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 PPIP5K2O43314 1243 aa16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 EIF6P56537 245 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 DPP8Q6V1X1 898 aaPredicted RBP16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 SP8Q8IXZ3 490 aa16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 DDX60Q8IY21 1712 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 GJA3Q9Y6H8 435 aa16.32■□□□□ 0.2
NPLOC4-213ENST00000573519 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
NPLOC4-213ENST00000573519 HTRA3P83110 453 aa16.31■□□□□ 0.2
NPLOC4-213ENST00000573519 AOC3Q16853 763 aa16.31■□□□□ 0.2
NPLOC4-213ENST00000573519 MPNDQ8N594 471 aa16.31■□□□□ 0.2
NPLOC4-213ENST00000573519 ZBTB38Q8NAP3 1195 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-213ENST00000573519 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms